=TRUE)
options(browser=kfmclient newTab)
Cheers,
Johannes Ranke
* Dirk Eddelbuettel [EMAIL PROTECTED] [071114 00:20]:
Hi again,
On 13 November 2007 at 21:45, Katharina Manderscheid wrote:
| sorry, i need further assistance:
| i thought it would be nice to use Kate as texteditor
.
Thanks also to Roland Rutschmann for sponsoring rkward for the official
Debian distribution.
Best regards,
Johannes
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with fractions.
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D
, the
installation of packages that depend on them is OK?
In R 2.6.1-1, there was a libRblas.so on amd64, but it went away with R
2.6.1-2. So if an installation of KernSmooth linked to it, it's no
wonder it's not working properly.
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* Sebastian P. Luque [EMAIL PROTECTED
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Hi Dirk and Michael,
... We differentiate between Depends (to run) and
Build-Depends (to compile and link).
yes, probably just xserver-xorg-dev is missing, but your suggestion is
much better:
What you may need is a simple
sudo apt-get build-dep r-cran-rgl
which should give you
* Dirk Eddelbuettel [EMAIL PROTECTED] [080627 19:30]:
Johannes,
On 27 June 2008 at 17:05, Johannes Ranke wrote:
| Hi,
|
| I just added RODBC to the list of packages maintained for the Debian
| etch backports on CRAN. The r-cran-rodbc packages are on their way to
| CRAN - if you want
* Vincent Goulet [EMAIL PROTECTED] [080628 00:20]:
Le ven. 27 juin à 11:05, Johannes Ranke a écrit :
Hi,
I just added RODBC to the list of packages maintained for the Debian
etch backports on CRAN.
Sigh :- Did the same on Ubuntu i386. README update, too.
Your're still ahead of me with ess
* Dirk Eddelbuettel [EMAIL PROTECTED] [080627 22:10]:
On 27 June 2008 at 21:46, Johannes Ranke wrote:
| * Dirk Eddelbuettel [EMAIL PROTECTED] [080627 19:30]:
|
| Johannes,
|
| On 27 June 2008 at 17:05, Johannes Ranke wrote:
| | Hi,
| |
| | I just added RODBC to the list
. In this case, you might want to look
at the repository where I keep my backporting scripts.
For my part, it will take a while till I get it done. Sorry for any
inconvenience that might be cause by this.
Kind regards,
Johannes
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https
://tolstoy.newcastle.edu.au/~rking/
It might be in the basement,
I'll go upstairs and check .. Escher
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). Hence, what to advice?
Best,
PM
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Dear all,
You can now find i386 and amd64 packages of R 2.9.1 compiled for lenny
in the usual place on CRAN.
I have switched from using permanent schroot environments to exclusively
using pbuilder, in order to check build dependencies as early in the
process as possible.
Is anyone in need of an
for i386, try
deb http://chem.uft.uni-bremen.de/r-cran etch-cran/
Kind regards,
Johannes
* Ted Harding ted.hard...@manchester.ac.uk [090717 17:40]:
On 17-Jul-09 15:20:10, Michael Dewey wrote:
At 15:21 07/07/2009, Johannes Ranke wrote:
Dear all,
You can now find i386 and amd64
list
R-SIG-Debian@r-project.org
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stable and am backporting new versions of R to
Debian stable. On average, new versions of R should be available (on
CRAN) much earlier than they migrate from unstable to testing.
Kind regards,
Johannes Ranke
Best,
PM
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Hi,
I would just like to second Dirks comments. Especially I would like to see
what happens if you
...
try 'sudo apt-get install r-base-core'. That _will_ show the cause,
and you _still_ have a chance to back out by saying 'No' to the 'do you
really want to do this' question.
Kind regards,
observes similar phenomena as Ted, please report.
Kind regards,
Johannes
Am Mittwoch, 11. November 2009 13:32:03 schrieb Ted Harding:
On 10-Nov-09 20:37:48, Johannes Ranke wrote:
Hi,
I would just like to second Dirks comments. Especially I would
like to see what happens if you
...
try
Hi,
the plyr source is on CRAN. So I do not understand where you have looked for
it.
http://cran.r-project.org/src/contrib/plyr_0.1.9.tar.gz
did you try
R install.packages(plyr)
under linux?
Kind regards,
Johannes
Am Sonntag, 28. März 2010 18:27:23 schrieb Biau David:
Hi all,
has
Hi,
if you want the latest R version on lenny, please follow the instructions in
the README that Dirk gave already pointed to:
http://cran.r-project.org/bin/linux/debian/
Installing packages with the method Denis just sketched is much more
cumbersome as dependencies are not
the fact that I did not replace the cran mirror line by an actulal
cran mirror URLs... I will give a look at all my backports this weekend
and do a little cleaning too!
thanks,
David Biau.
#
From: Johannes Ranke jra...@uni-bremen.de
To: r-sig-debian
Dear all,
This is to announce the immediate availability of R 2.11.0 for Debian lenny on
CRAN. The packages have arrived at cran.r-project.org and are in the process
of propagating to the mirrors.
You may have to update or rebuild R packages installed under R 2.10.0
(including r-cran-*
Hi,
Am Sonntag, 16. Mai 2010, um 18:26:08 schrieb Tim Häring:
Thank you for your answer.
There isn't quite an equivalent of the R GUI on Linux, although you
might want to look into JGR for a similar experience.
Oh, these are bad news.
consider any of the available editors: Emacs +
Hi Ken,
you can override R_LIBS_USER in ~/.Rprofile (in your case this expands to
/home/ken/.Rprofile). For example, I have
R_LIBS_USER=~/lib/R/library
in my file. Details can be found from within R with
?Startup
Note that R CMD does not seem to respect the settings in
Hi,
Am Donnerstag, 27. Mai 2010, um 16:40:53 schrieb Michael Friendly:
[Running debian stable]
I followed the instructions at
http://cran.r-project.org/bin/linux/debian, adding
deb http://cran.R-project.org/bin/linux/debian lenny-cran/
to /etc/apt/sources.list. But apt-get still leaves me
Sorry,
please exchange .Rprofile with .Renviron in my mail.
Johannes
Am Sonntag, 30. Mai 2010, um 18:12:53 schrieb Johannes Ranke:
Hi Ken,
you can override R_LIBS_USER in ~/.Rprofile (in your case this expands to
/home/ken/.Rprofile). For example, I have
R_LIBS_USER=~/lib/R
:
--
Message: 1
Date: Tue, 1 Jun 2010 00:58:30 +0200
From: Johannes Ranke jra...@uni-bremen.de
To: r-sig-debian@r-project.org
Subject: Re: [R-sig-Debian] building rpy against lenny-cran
Message-ID: 201006010058.31443.jra...@uni-bremen.de
Content-Type: Text/Plain; charset=iso-8859-1
Ted,
I think you are not the only one that is annoyed by the need for translating
the line
deb http://my.favorite.cran.mirror/bin/linux/debian lenny/
into something that works. However, this helps reducing the load on
the main CRAN server in Vienna, and network load in general. I think
Am Sonntag, 6. Juni 2010, um 21:38:26 schrieb Johannes Ranke:
Ted,
I think you are not the only one that is annoyed by the need for
translating the line
deb http://my.favorite.cran.mirror/bin/linux/debian lenny/
into something that works. However, this helps reducing the load
Dear Jose,
First of all let me explain why your first approach did not work:
install.packages(chemometrics)
Erro em install.packages(chemometrics) :
objeto 'chemometrics' não encontrado
R does not know an object named chemometrics and therefore complains. You
should have typed
David,
Has this been resolved properly, i.e. is your problem solved? In case not:
It seems that to me that tcl-dev and tk-dev were not present on the system
when R was compiled. Installing them afterwards would not bring tcl/tk
functionality, you would need to recompile afterwards.
Pre-built
Hi again,
I need to correct myself: the line should read
deb http://cran.r-project.org/bin/linux/debian lenny-cran/
It is these little things that matter in the end. It seems that the
description is really still to complicated in the README?
Kind regards,
Johannes
This is for the
Am Sonntag, 27. Februar 2011, um 22:34:20 schrieb Dirk Eddelbuettel:
apt-get updates kept getting errors / failure for cran.us.r-project.org so
I finally switched it to cran.r-project.org and am now getting updates for
two Ubuntu machines. Anybody else seeing this?
Dirk
I recently had Not
Dear Chris,
I am just keeping some parts of the thread below that I have not answered yet:
All that begs the question how I got myself here.
I think it was really a bug in the README on CRAN. I wrote that you can run a
regular update of R packages using update.packages() which is not
Hi,
from the NEWS file of R-devel:
CHANGES IN R VERSION 2.14.0:
SIGNIFICANT USER-VISIBLE CHANGES:
o All packages must have a namespace, and one is created on
installation if not supplied in the sources. This means that any
package without a namespace must be re-installed
On Friday 18 November 2011 20:34:59 Kjetil brinchmann Halvorsen wrote:
Hola!
I had my hard disk and cpu fried, so had to reinstall debian from
scratch, and now I have problems compiling R
R-2.14.0. My system is wheezy with Xfce4 desktop. (-amd-64)
Ola Kjetil,
you may want to consider
Hi,
I just loaded ggplot2 and ran fix() both using R 2.14.1 from CRAN on Debian
stable and Ubuntu 11.10 - no problems here . See one comment inline below.
Date: Sun, 8 Jan 2012 15:32:49 -0600 From: Paul Johnson
pauljoh...@gmail.com To: R-help r-h...@r-project.org Subject: [R]
fix and edit
Dear Karin,
As you seem to have the R version that originally comes with lucid (R
2.10.1-2), I would recommend to install r-cran-rgtk2 and r-cran-cairodevice
with your package manager (e.g. synaptic) which will also install the gtk2
dependencies without the need to install the development
Don,
On Tuesday 27 March 2012 00:50:01 Don Armstrong wrote:
On Mon, 26 Mar 2012, Johannes Ranke wrote:
Dear Dirk, dear all,
| Perhaps an indication that this cran2deb stuff is very green?
It has been inoperational for years as you could have noticed by
looking at the version
Hi,
did you have a look at the ubuntu README on CRAN?
First see if there are precompiled packages
aptitude search r-cran-epi
if not install r-base-dev to be able to compile source packages, and then,
from within R, run
install.packages(epiR)
For details and some background, please refer to
.
So my question would be, did you mount your /home drive using the noexec
option?
Kind regards,
Johannes
ranke@time:~$ R
R version 2.15.1 (2012-06-22) -- Roasted Marshmallows
Copyright (C) 2012 The R Foundation for Statistical Computing
ISBN 3-900051-07-0
Platform: x86_64-pc-linux-gnu (64
Hi Ross,
as the maintainer of the Debian squeeze debs on CRAN, I have to admit that I
have no clue about MPI.
But the first thing I would try is to get the build dependencies of the Debian
squeeze Rmpi package
apt-get build-dep r-cran-rmpi
and then try installing Rmpi from within R as Dirk
needed at
runtime.
I then installed the build dependencies by apt-get build-dep.
Within R, I then used install.packages() to install Rmpi. This installed the
package and it loaded fine.
Kind regards,
Johannes
Am Freitag, 15. Februar 2013, 18:06:35 schrieb Johannes Ranke:
Hi Ross
Dear Lorenzo,
Am Dienstag, 7. Mai 2013, 18:33:12 schrieb Lorenzo Isella:
Dear All,
I am using Debian testing on multiple machine machines at home.
This is my source list
deb http://ftp.ch.debian.org/debian/ testing main contrib non-free
deb-src http://ftp.ch.debian.org/debian/ testing
currently in stable?
Regards,
Robert
On 10 May 2013 09:52, Johannes Ranke jra...@uni-bremen.de wrote:
Dear Lorenzo,
Am Dienstag, 7. Mai 2013, 18:33:12 schrieb Lorenzo Isella:
Dear All,
I am using Debian testing on multiple machine machines at home.
This is my source list
Hi,
The R 3 packages for wheezy are currently being built for i386 and amd64. If
all goes well, they will be available within the next two days.
As for R on Debian wheezy, I just checked demo(plotmath) on the default R
2.15.1 on wheezy, and it produced all the nice plotting symbols I would
Dear all,
I have done the backport of R 3.0 to wheezy in the usual way and it is on its
way to CRAN.
If you are interested in installing it, be aware that the debianized R
packages availabe in wheezy that are not in the list of packages recompiled
for CRAN will not work with this backport.
. Bayview Ave.
Homer, AK 99603, USA
phone: +1 907 235 0728
cell: 299 6152
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2.15 deb package, wget
it onto the travis host and use it.
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Hi,
did you talk to your sysadmin about this? It is not possible to see what
happened as you do not provide a build log, but it seems some x fonts arent't
installed any more, or some xorg related headers (-dev packages) are not
present on the build machine.
Kind regards,
Johannes
Am
Hi,
Am Donnerstag, 6. März 2014, 23:46:28 schrieb Harutyun Khachatryan:
Dear all,
I am experiencing this problem with R in Debian 6.
The config saying about default shell in R for Debian 6 is in file
/usr/lib/R/etc/Makeconf (line 80 SHELL = /bin/bash)
The comment on line 67 suggest
PM, Johannes Ranke jra...@uni-bremen.de
wrote:
Hi,
Am Donnerstag, 6. März 2014, 23:46:28 schrieb Harutyun Khachatryan:
Dear all,
I am experiencing this problem with R in Debian 6.
The config saying about default shell in R for Debian 6 is in file
/usr/lib/R/etc/Makeconf
version deleted]]
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Dear Kabirou Toikourou
Please have a look at
https://stat.ethz.ch/mailman/listinfo/r-sig-debian
Kind regards,
Johannes Ranke
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Am Dienstag, 16. Dezember 2014, 08:39:34 schrieb Dirk Eddelbuettel:
On 16 December 2014 at 14:45, Johannes Ranke wrote:
| this list serves as a forum for discussions about R backports present on
| CRAN,
The mandate, as I recall, is a little broader: usage of R on Debian-based
systems
otherwise I will only have time in the weekend to do something (amend the
README or set up a new repo for jessie) on the weekend.
The repository for jessie is in the works - but don't expect it to be up
before next weekend.
Johannes
___
Dear Carl,
the CRAN repository does not support Debian testing. I did think of adding
support for jessie,
as it is frozen now, but did not get around to do it yet.
I believe you would have no problem when using Debian stable.
Am Freitag, 16. Januar 2015, 21:44:25 schrieb Carl Boettiger:
Dear
/2010-May/001146.html
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.
Le 02/03/2015 04:09, Johannes Ranke a écrit :
Hi Mathieu,
thanks for your input. It reminds me how I got involved in the Debian
backports, as I thought the Debian README on CRAN needed an update...
At the moment I do not have the time to reorganize the README, so if you
would
like
.
Dirk
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-2all
Make it easier to work with strings
ii r-cran-testthat0.9.1-1amd64
GNU R testsuite
regards
raju
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of all required
components and deinstalling components that may interfere.
Best regards,
Stefan
Am 07.05.2015 um 13:32 schrieb Dirk Eddelbuettel:
On 7 May 2015 at 13:17, Johannes Ranke wrote:
| I have no idea where the problem is, but I feel this strong urge to
| mention
[[alternative HTML version deleted]]
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Hi,
Am Dienstag, 18. August 2015, 10:54:55 schrieb Irucka Embry:
Hi all, I have the following in my apt sources.list file:
deb https://...
is there any reason you want to use https rather than http?
server certificate verification failed. CAfile:
/etc/ssl/certs/ca-certificates.crt
> 404 Not Found
> Err http://cran.at.r-project.org/bin/linux/debian/ squeeze-cran3/
> r-cran-class 7.3-12-1~squeezecran.3.2.1
>
> [[alternative HTML version deleted]]
>
> __
Hi,
Am Freitag, 18. September 2015, 15:25:10 schrieb George N. White III:
> On Fri, Sep 18, 2015 at 8:35 AM Francois-Xavier Jollois <
>
> francois-xavier.joll...@parisdescartes.fr> wrote:
> > Hi everybody
> >
> > I try to update R 3.1.1 to R 3.2.2 on a Debian Jessie (8.2) server. I
> > try to
Python 3 Cairo bindings for the
> GObject library
>
> I recently noticed it also affects other software, like Firefox internet
> browser.
>
> --
> Dario Strbenac
> PhD Student
> University of Sydney
> Camperdown NSW 2050
&
to say whether this worked either way.
Thanks for the help,
Matt
On Mon, Mar 21, 2016 at 1:48 PM, Johannes Ranke <jranke@uni-
bremen.de[1]> wrote:
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[1] mailto:jra...@uni-bremen.de
[[alternativ
Am Montag, 21. März 2016, 13:31:44 schrieb Dirk Eddelbuettel:
> On 21 March 2016 at 13:18, Matthew Simpson wrote:
> | It may be significant that my chromebook has an ARM processor. I don't
> | know
> | about the details of how this works, but perhaps some pieces of the R
> | install haven't been
Hello Charles,
thanks for the hint - I changed the instructions for the Debian section to use
the key fingerprint. The change should propagate to CRAN
https://cran.r-project.org/bin/linux/debian
and its mirrors soon.
Best regards,
Johannes
Am Sonntag, 4. September 2016, 10:03:16 schrieb
> > | Thanks. OK, I have now done
> > |
> > | sudo apt-get install r-cran-rgdal
> > |
> > | successfully.
> >
> > Very good.
> >
> > Now do
> >
> >IP <- installed.packages()
> >
> > and convince yourself that you have rgdal. You could even do
> >
> >library(rgdal)
> > |
> > |
Am Dienstag, 8. November 2016, 08:28:35 schrieb Dirk Eddelbuettel:
> On 8 November 2016 at 14:39, Lentes, Bernd wrote:
> | i'd like to install R 2.5 on an Ubuntu 14.04.
> | I have a special software requiring this old version.
> |
> | While ./configure, i get the following error:
> |
> |
> | I am surprised that I did not see a related bug report in the Debian BTS
> | yet, did I overlook something? I only looked for r-base.
>
> They may not know yet. I should write to debian-devel.
I have just submitted a bug report so the further discussion gets archived in
the right place:
Am Donnerstag, 27. April 2017, 06:32:13 schrieb Dirk Eddelbuettel:
> On 27 April 2017 at 12:01, Johannes Ranke wrote:
> | > so it seems to me this must affect all packages in Debian sid that were
> | > built before the release of R 3.4.0!
> |
> | or rather before 14 April
>
> > and there was an object that was not found. I am on a train on the way to
> > a
> > meeting right now, so I can not look into it at the moment. Maybe a side
> > effect of the new registration requirements for compiled objects?
>
> Right, you need to run
>
> > u
Am Dienstag, 25. April 2017, 11:21:31 schrieb Dirk Eddelbuettel:
> On 25 April 2017 at 16:11, Johannes Ranke wrote:
> | This looks similar to what I got this morning when I tested my
> | (unreleased)
> | backport of R 3.4.0 to Debian jessie. My test was
> |
> | library(MAS
> so it seems to me this must affect all packages in Debian sid that were
> built before the release of R 3.4.0!
or rather before 14 April 2017, which is when R from revision r72510 was
uploaded to sid as pre-release candidate.
Johannes
___
Am Donnerstag, 27. April 2017, 15:05:32 schrieb J C Nash:
> Is there a reason for jessie-cran3 rather than xenial? For Linux Mint 18
> (admittedly not 18.1) I have
>
> deb https://cloud.r-project.org/bin/linux/ubuntu xenial/
>
> as one of the apt entries.
>
> JN
Seconded. You should not expect
Am Dienstag, 25. April 2017, 08:50:34 schrieb Dirk Eddelbuettel:
> On 25 April 2017 at 14:58, Göran Broström wrote:
> | hello,
> |
> | I just installed R-3.4.0 from scratch:
> |
> | $ sudo apt install r-base
> |
> | but when I try
> |
> | > library(survival, lib.loc = "/usr/lib/R/library")
>
Dear all,
With this email I would like to announce the availability of R 3.4.0 for
jessie and stretch on CRAN. Please excuse the delay, caused by some
uncertainty about how to deal properly with the incompatibility of R 3.4.0
with packages compiled with earlier versions that use calls to .C
> ___
> R-SIG-Debian mailing list
> R-SIG-Debian@r-project.org
> https://stat.ethz.ch/mailman/listinfo/r-sig-debian
--
Johannes Ranke
Wissenschaftlicher Berater
https://jrwb.de/contact
___
R-SIG-D
Hi,
I would like to announce the immediate avaiability of armhf and arm64 binaries
of R 3.4.2 for Debian stretch on CRAN. I plan to skip the armel binaries in
the future, so in case you should use this architecture and rely on the CRAN
Debian backports, please let me know.
Cheers,
Johannes
tchcran.0_amd64.deb
> rkward-data_0.6.5-1~stretchcran.0_all.deb
>
> By default, apt-get installed the Debian repository version (rkward
> 0.6.5-1+b1 0.6.5-1+b1).
>
> Thanks for your contributions to the R-Debian project!
>
> Regards. Griera.
>
> On Mon, 25 Sep 2017 11:41:5
Am Freitag, 29. September 2017, 22:30:08 CEST schrieb Dirk Eddelbuettel:
> On 30 September 2017 at 04:21, Johannes Ranke wrote:
> | I noticed that rkward, littler, rpy and rpy2 do not depend on r-api-* at
> | all, so they do not get picked up by the transition.
>
sitory -y ppa:edd/misc
> | >
> | > We may propagate these for to the usual 'rrutter' and then CRAN repos
> | > too,
> | > and will take it from there to figure out how to get r-api-3.4.
> | >
> | > I'm sorry for the disruption. My hand was a little forced but I should
&
Small correction to my previous post:
> As of now (this was obviously going on today), all
> reverse dependencies at level 1 (including the recommended packages) of
> r-api-* have been adapted to depend on r-api-3.4 in unstable.
rpart is not through yet, so r-recommended is AFAICS still not
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