Oscar:
Oscar Franzén wrote on 17/03/2010 17:55:
Dear all,
I'm trying to use the boot.phylo function in the ape package to get
bootstrap values for my NJ-tree which is based on a clustalw alignment.
Basically what I'm doing is this:
library(ape)
library(seqinr)
an = read.alignment(file.aln,
I'm trying to plot two trees opposite each other using ape
(essentially as in Fig. 4.18 in Paradis' Analysis of Phylogenetics and
Evolution with R, with some modifications). I was having trouble
seeing the rootmost line on the plot on the right, so decided to try
using x.lim as an argument
