Hi Emmanuel
I guess i can root it in treeview, and then import it.
Cheers, Brian.
Date: Thu, 26 May 2011 16:03:06 +0700
From: emmanuel.para...@ird.fr
To: brianbou...@hotmail.com
CC: r-sig-phylo@r-project.org
Subject: Re: [R-sig-phylo] Displaying branch support after rooting
Hi
Hi Brian,
They look the same for me. Maybe it's easier to see this using the
default values of nodelabels():
plot(tree)
nodelabels(tree$node.label)
x11()
plot(rooted)
nodelabels(rooted$node.label)
Best,
Emmanuel
Brian Bourke wrote on 23/05/2011 23:44:
Hi Emmanuel
I've done as you
Hi Emmanuel
I've done as you said but the positions of the branch support values in the
rooted tree remain a problem eg
library(ape)
## original tree
tree - read.tree(text =
Dear All
I am using ape to draw trees output from mrbayes and I am having problems with
the way branch support values are being displayed on my trees. Support values
change after rooting, and vary depending on the root. Below is an example of a
tree, and the way in which branch support
-project.org
Date: Sat, 21 May 2011 16:02:03
To: r-sig-phylo@r-project.org
Subject: [R-sig-phylo] Displaying branch support after rooting
Dear All
I am using ape to draw trees output from mrbayes and I am having problems with
the way branch support values are being displayed on my trees. Support
