Author: bugman
Date: Wed Jan 2 17:13:58 2008
New Revision: 4261
URL: http://svn.gna.org/viewcvs/relax?rev=4261view=rev
Log:
Added 10 more unit tests for the setting of model-free parameter values.
These tests check the default parameter values if the val arg is not supplied.
Modified:
Author: bugman
Date: Wed Jan 2 17:23:19 2008
New Revision: 4262
URL: http://svn.gna.org/viewcvs/relax?rev=4262view=rev
Log:
Added 5 unit tests for the setting of multiple model-free parameter values at
once.
Modified:
1.3/test_suite/unit_tests/value_testing_base.py
Modified:
Author: bugman
Date: Wed Jan 2 17:24:35 2008
New Revision: 4263
URL: http://svn.gna.org/viewcvs/relax?rev=4263view=rev
Log:
Merged revisions 4255-4262 via svnmerge from
svn+ssh://[EMAIL PROTECTED]/svn/relax/1.3
r4255 | bugman | 2008-01-02 16:28:34 +0100 (Wed, 02 Jan 2008) | 3 lines
Author: bugman
Date: Wed Jan 2 17:41:23 2008
New Revision: 4265
URL: http://svn.gna.org/viewcvs/relax?rev=4265view=rev
Log:
Bug fix for the unit test of the
generic_fns.diffusion_tensor.return_data_names() function.
No RelaxError is now raised.
Modified:
Author: bugman
Date: Thu Jan 3 11:57:32 2008
New Revision: 4266
URL: http://svn.gna.org/viewcvs/relax?rev=4266view=rev
Log:
Wrote 20 unit tests for the setting of RSDM parameters.
Modified:
1.3/test_suite/unit_tests/value_testing_base.py
Modified:
Author: bugman
Date: Thu Jan 3 15:16:00 2008
New Revision: 4268
URL: http://svn.gna.org/viewcvs/relax?rev=4268view=rev
Log:
Wrote 57 unit tests for the setting of diffusion tensor parameters.
This should cover all valid parameters and parameter combinations. A number of
invalid combinations
Author: bugman
Date: Thu Jan 3 15:52:24 2008
New Revision: 4272
URL: http://svn.gna.org/viewcvs/relax?rev=4272view=rev
Log:
Finished converting generic_fns.value.set() to the new relax design.
The function is now considerably simpler.
Modified:
1.3/generic_fns/value.py
Modified:
Author: bugman
Date: Thu Jan 3 15:57:05 2008
New Revision: 4273
URL: http://svn.gna.org/viewcvs/relax?rev=4273view=rev
Log:
Fixed 2 of the diffusion tensor parameter setting unit tests.
These are the invalid parameter combinations, where the
RelaxUnknownParamCombError is thrown.
Modified:
Author: bugman
Date: Thu Jan 3 15:21:13 2008
New Revision: 4270
URL: http://svn.gna.org/viewcvs/relax?rev=4270view=rev
Log:
Fixed the RelaxError message for the ellipsoidal diff tensor when setting theta
or phi.
Modified:
1.3/generic_fns/diffusion_tensor.py
Modified:
Author: bugman
Date: Thu Jan 3 16:01:36 2008
New Revision: 4275
URL: http://svn.gna.org/viewcvs/relax?rev=4275view=rev
Log:
Manually ported the bug fix of r4274 from the 1.3 line.
.
r4274 | bugman | 2008-01-03 15:59:55 +0100 (Thu, 03 Jan 2008) | 5 lines
Changed paths:
M
Author: bugman
Date: Thu Jan 3 15:20:29 2008
New Revision: 4269
URL: http://svn.gna.org/viewcvs/relax?rev=4269view=rev
Log:
Bug fix for the generic_fns.diffusion_tensor.set() function.
The setting of alpha, beta, and gamma is now forbidden for the spheroidal
diffusion tensor. The
setting of
Author: bugman
Date: Thu Jan 3 16:12:47 2008
New Revision: 4276
URL: http://svn.gna.org/viewcvs/relax?rev=4276view=rev
Log:
Updated the return_value() method of the Common_functions base class to the new
relax design.
Modified:
1.3/specific_fns/base_class.py
Modified:
Author: bugman
Date: Thu Jan 3 17:18:57 2008
New Revision: 4277
URL: http://svn.gna.org/viewcvs/relax?rev=4277view=rev
Log:
Updated the set() method of the Common_functions base class to the new relax
design.
Modified:
1.3/specific_fns/base_class.py
Modified:
Author: bugman
Date: Thu Jan 3 17:19:57 2008
New Revision: 4278
URL: http://svn.gna.org/viewcvs/relax?rev=4278view=rev
Log:
Updated the set_update() dummy method of the Common_functions base class to the
new relax design.
Modified:
1.3/specific_fns/base_class.py
Modified:
Author: bugman
Date: Thu Jan 3 17:28:19 2008
New Revision: 4280
URL: http://svn.gna.org/viewcvs/relax?rev=4280view=rev
Log:
Updated the docstrings for epydoc for the set() and set_update() class methods
recently updated.
Modified:
1.3/specific_fns/base_class.py
Author: bugman
Date: Thu Jan 3 17:48:10 2008
New Revision: 4283
URL: http://svn.gna.org/viewcvs/relax?rev=4283view=rev
Log:
Bug fix for all the spin specific unit tests of the value setting function.
The spin_id should have started with the atom identifier '@' rather than the
residue
Author: bugman
Date: Thu Jan 3 17:49:51 2008
New Revision: 4284
URL: http://svn.gna.org/viewcvs/relax?rev=4284view=rev
Log:
Another bug fix for the spin specific unit tests of the value setting function.
No spin data was being set up for the reduced spectral density mapping
parameter tests.
Author: bugman
Date: Thu Jan 3 18:00:02 2008
New Revision: 4285
URL: http://svn.gna.org/viewcvs/relax?rev=4285view=rev
Log:
Updated the set() method of the Jw_mapping class to the new relax design.
Modified:
1.3/specific_fns/jw_mapping.py
Modified: 1.3/specific_fns/jw_mapping.py
URL:
Author: bugman
Date: Thu Jan 3 18:04:59 2008
New Revision: 4287
URL: http://svn.gna.org/viewcvs/relax?rev=4287view=rev
Log:
Set __docformat__ for all jw mapping docstrings which are appended to the user
function docstrings.
The line added at the end of the docstring was:
__docformat__ =
Author: bugman
Date: Thu Jan 3 18:06:21 2008
New Revision: 4288
URL: http://svn.gna.org/viewcvs/relax?rev=4288view=rev
Log:
Slackened the testing of floats in a parameter setting unit test.
Modified:
1.3/test_suite/unit_tests/value_testing_base.py
Modified:
Author: bugman
Date: Thu Jan 3 18:08:36 2008
New Revision: 4289
URL: http://svn.gna.org/viewcvs/relax?rev=4289view=rev
Log:
Bug fix in the specific_fns.jw_mapping.default_value() function.
The CSA parameter check should have been for lower case.
Modified:
1.3/specific_fns/jw_mapping.py
Author: bugman
Date: Thu Jan 3 18:09:25 2008
New Revision: 4290
URL: http://svn.gna.org/viewcvs/relax?rev=4290view=rev
Log:
Slackened the testing of floats in a parameter setting unit test.
Modified:
1.3/test_suite/unit_tests/value_testing_base.py
Modified:
Author: bugman
Date: Thu Jan 3 18:03:57 2008
New Revision: 4286
URL: http://svn.gna.org/viewcvs/relax?rev=4286view=rev
Log:
Set __docformat__ for all model-free docstrings which are appended to the user
function docstrings.
The line added at the end of the docstring was:
__docformat__ =
Author: bugman
Date: Thu Jan 3 18:22:51 2008
New Revision: 4292
URL: http://svn.gna.org/viewcvs/relax?rev=4292view=rev
Log:
Merged revisions 4272-4291 via svnmerge from
svn+ssh://[EMAIL PROTECTED]/svn/relax/1.3
r4272 | bugman | 2008-01-03 15:52:24 +0100 (Thu, 03 Jan 2008) | 5 lines
Author: bugman
Date: Thu Jan 3 18:19:58 2008
New Revision: 4291
URL: http://svn.gna.org/viewcvs/relax?rev=4291view=rev
Log:
Bug fix for the jw mapping parameter setting function
specific_fns.jw_mapping.set().
The J(w) parameters do not have default values and now a new RelaxError,
Author: bugman
Date: Fri Jan 4 10:36:39 2008
New Revision: 4296
URL: http://svn.gna.org/viewcvs/relax?rev=4296view=rev
Log:
Manually ported the bug fix of r4295 from the 1.3 line.
.
r4295 | bugman | 2008-01-04 10:35:22 +0100 (Fri, 04 Jan 2008) | 6 lines
Changed paths:
M
Author: bugman
Date: Fri Jan 4 10:35:22 2008
New Revision: 4295
URL: http://svn.gna.org/viewcvs/relax?rev=4295view=rev
Log:
Bug fix for the generic_fns.diffusion_tensor.set() function.
When setting a default value, the non-existant array 'object_names' was being
accessed. The array
is
Author: bugman
Date: Fri Jan 4 10:41:38 2008
New Revision: 4297
URL: http://svn.gna.org/viewcvs/relax?rev=4297view=rev
Log:
Bug fixes for the unit tests of the setting of default values of the diff
params.
The correct default values are now being checked, and some tests were made less
Author: bugman
Date: Fri Jan 4 10:31:01 2008
New Revision: 4294
URL: http://svn.gna.org/viewcvs/relax?rev=4294view=rev
Log:
Wrote the unit tests for the settubg if default diffusion tensor parameter
values.
Modified:
1.3/test_suite/unit_tests/value_testing_base.py
[This mail would be too
Author: bugman
Date: Fri Jan 4 10:15:11 2008
New Revision: 4293
URL: http://svn.gna.org/viewcvs/relax?rev=4293view=rev
Log:
Changed the name of all the diffusion tensor parameter setting unit tests.
This is to prepare for unit tests checking the default values.
Modified:
Author: bugman
Date: Fri Jan 4 11:19:35 2008
New Revision: 4302
URL: http://svn.gna.org/viewcvs/relax?rev=4302view=rev
Log:
Added 14 unit tests for the setting of relaxation curve fitting parameter
values.
Modified:
1.3/test_suite/unit_tests/value_testing_base.py
Modified:
Author: bugman
Date: Fri Jan 4 11:22:24 2008
New Revision: 4303
URL: http://svn.gna.org/viewcvs/relax?rev=4303view=rev
Log:
Renamed all the previous unit tests from 'test_set_relax_data_xxx' to
'test_set_relax_fit_xxx'.
Modified:
1.3/test_suite/unit_tests/value_testing_base.py
Modified:
Author: bugman
Date: Fri Jan 4 11:26:36 2008
New Revision: 4304
URL: http://svn.gna.org/viewcvs/relax?rev=4304view=rev
Log:
Converted specific_fns.relax_fit.data_init() to the new relax design.
Modified:
1.3/specific_fns/relax_fit.py
Modified: 1.3/specific_fns/relax_fit.py
URL:
Author: bugman
Date: Fri Jan 4 11:47:21 2008
New Revision: 4307
URL: http://svn.gna.org/viewcvs/relax?rev=4307view=rev
Log:
Modified the structure of the model-free classes containing the model-free
specific functions.
One parent, but empty, class called Model_free now inherits all model-free
Author: bugman
Date: Fri Jan 4 11:28:07 2008
New Revision: 4305
URL: http://svn.gna.org/viewcvs/relax?rev=4305view=rev
Log:
Bug fix for the specific_fns.relax_fit.default_value() function.
The Iinf parameter was being checked for as 'te'!!!
Modified:
1.3/specific_fns/relax_fit.py
Author: bugman
Date: Fri Jan 4 10:57:32 2008
New Revision: 4298
URL: http://svn.gna.org/viewcvs/relax?rev=4298view=rev
Log:
Bug fix for the generic_fns.diffusion_tensor.default_values() function.
For each parameter which defaults to zero, None was being returned instead!!!
This bug was caught
Author: bugman
Date: Fri Jan 4 10:59:12 2008
New Revision: 4299
URL: http://svn.gna.org/viewcvs/relax?rev=4299view=rev
Log:
Manually ported the bug fix of r4298 from the 1.3 line.
.
r4298 | bugman | 2008-01-04 10:57:32 +0100 (Fri, 04 Jan 2008) | 6 lines
Changed paths:
M
Author: bugman
Date: Fri Jan 4 11:00:19 2008
New Revision: 4300
URL: http://svn.gna.org/viewcvs/relax?rev=4300view=rev
Log:
Slackened the testing of floats in a diff parameter setting unit test.
Modified:
1.3/test_suite/unit_tests/value_testing_base.py
Modified:
Author: bugman
Date: Fri Jan 4 11:05:10 2008
New Revision: 4301
URL: http://svn.gna.org/viewcvs/relax?rev=4301view=rev
Log:
Merged revisions 4293-4300 via svnmerge from
svn+ssh://[EMAIL PROTECTED]/svn/relax/1.3
r4293 | bugman | 2008-01-04 10:15:11 +0100 (Fri, 04 Jan 2008) | 5 lines
Author: bugman
Date: Fri Jan 4 14:18:38 2008
New Revision: 4318
URL: http://svn.gna.org/viewcvs/relax?rev=4318view=rev
Log:
Removed the import of the now non-existant 'Colour' class.
Modified:
1.3/prompt/pymol.py
Modified: 1.3/prompt/pymol.py
URL:
Author: bugman
Date: Fri Jan 4 14:42:16 2008
New Revision: 4321
URL: http://svn.gna.org/viewcvs/relax?rev=4321view=rev
Log:
Bug fix for running solely the system/functional tests.
The interpeter, which is essential for the tests, is now loaded.
Modified:
1.3/relax
Modified: 1.3/relax
Author: bugman
Date: Fri Jan 4 14:34:59 2008
New Revision: 4320
URL: http://svn.gna.org/viewcvs/relax?rev=4320view=rev
Log:
Changed the --unit-test command line option to --unit-tests.
The old option still works thanks to the optparse package.
Modified:
1.3/relax
Modified: 1.3/relax
URL:
Author: bugman
Date: Fri Jan 4 14:32:41 2008
New Revision: 4319
URL: http://svn.gna.org/viewcvs/relax?rev=4319view=rev
Log:
Added the command line option --system-tests to run solely the relax
system/functional tests.
Modified:
1.3/relax
Modified: 1.3/relax
URL:
@@
###
# #
-# Copyright (C) 2004, 2006-2008 Edward d'Auvergne #
+# Copyright (C) 2003-2004, 2006-2008 Edward d'Auvergne
@@
###
# #
-# Copyright (C) 2006 Edward d'Auvergne#
+# Copyright (C) 2003-2004, 2006-2008 Edward d'Auvergne
Author: bugman
Date: Fri Jan 4 14:08:24 2008
New Revision: 4313
URL: http://svn.gna.org/viewcvs/relax?rev=4313view=rev
Log:
Removed all of the imports of the now non-existant 'Colour' class.
Modified:
1.3/prompt/molmol.py
1.3/relax
Modified: 1.3/prompt/molmol.py
URL:
Author: bugman
Date: Fri Jan 4 14:06:10 2008
New Revision: 4312
URL: http://svn.gna.org/viewcvs/relax?rev=4312view=rev
Log:
Converted all the class methods of the colour module to functions.
Modified:
1.3/colour.py
[This mail would be too long, it was shortened to contain the URLs only.]
Author: bugman
Date: Fri Jan 4 13:53:24 2008
New Revision: 4309
URL: http://svn.gna.org/viewcvs/relax?rev=4309view=rev
Log:
Updated all of the model-free specific Molmol macro function to the new relax
design.
Modified:
1.3/specific_fns/model_free/molmol.py
[This mail would be too long,
Author: bugman
Date: Fri Jan 4 14:10:10 2008
New Revision: 4314
URL: http://svn.gna.org/viewcvs/relax?rev=4314view=rev
Log:
Fixed the appending of the molmol_classic_style docstring.
The function used to be called simply classic.
Modified:
1.3/prompt/molmol.py
Modified:
@@
###
# #
-# Copyright (C) 2004, 2006 Edward d'Auvergne #
+# Copyright (C) 2004, 2006-2008 Edward d'Auvergne
Author: bugman
Date: Fri Jan 4 16:04:53 2008
New Revision: 4323
URL: http://svn.gna.org/viewcvs/relax?rev=4323view=rev
Log:
Update for the generic_fns.sequence.display() function.
Now the function operates correctly with IO redirection of stdout.
Modified:
1.3/generic_fns/sequence.py
Author: bugman
Date: Fri Jan 4 16:09:52 2008
New Revision: 4324
URL: http://svn.gna.org/viewcvs/relax?rev=4324view=rev
Log:
Replaced the insecure os.tempnam() with tempfile.mktemp().
Modified:
1.3/test_suite/unit_tests/sequence_testing_base.py
Modified:
@@
+###
+# #
+# Copyright (C) 2008 Edward d'Auvergne#
+# #
+# This file is part of the program relax
Author: bugman
Date: Fri Jan 4 17:39:20 2008
New Revision: 4327
URL: http://svn.gna.org/viewcvs/relax?rev=4327view=rev
Log:
Created the _RelaxTestResult class as a replacement for _TextTestResult.
This is where the capture of STDOUT should occur.
Modified:
Author: bugman
Date: Fri Jan 4 17:45:21 2008
New Revision: 4329
URL: http://svn.gna.org/viewcvs/relax?rev=4329view=rev
Log:
Restored the run() method accidentally renamed to run2() in the last commit.
Modified:
1.3/test_suite/relax_test_runner.py
Modified:
Author: bugman
Date: Fri Jan 4 18:24:29 2008
New Revision: 4333
URL: http://svn.gna.org/viewcvs/relax?rev=4333view=rev
Log:
Removed the RelaxTestRunner.run() method as it was doing nothing.
Modified:
1.3/test_suite/relax_test_runner.py
Modified: 1.3/test_suite/relax_test_runner.py
URL:
Author: bugman
Date: Fri Jan 4 18:28:05 2008
New Revision: 4334
URL: http://svn.gna.org/viewcvs/relax?rev=4334view=rev
Log:
Reverted the debugging code of r4330.
The command used was:
svn merge -r4330:4329 svn+ssh://[EMAIL PROTECTED]/svn/relax/1.3
Modified:
Author: bugman
Date: Fri Jan 4 17:49:45 2008
New Revision: 4330
URL: http://svn.gna.org/viewcvs/relax?rev=4330view=rev
Log:
Added a deliberate unit test failure for implementing the new RelaxTestRunner
code.
Modified:
1.3/test_suite/unit_tests/sequence_testing_base.py
Modified:
Author: bugman
Date: Fri Jan 4 17:50:17 2008
New Revision: 4331
URL: http://svn.gna.org/viewcvs/relax?rev=4331view=rev
Log:
The normal startTest() code is now run as well.
Modified:
1.3/test_suite/relax_test_runner.py
Modified: 1.3/test_suite/relax_test_runner.py
URL:
Author: bugman
Date: Fri Jan 4 18:36:09 2008
New Revision: 4336
URL: http://svn.gna.org/viewcvs/relax?rev=4336view=rev
Log:
Merged revisions 4302-4335 via svnmerge from
svn+ssh://[EMAIL PROTECTED]/svn/relax/1.3
r4302 | bugman | 2008-01-04 11:19:35 +0100 (Fri, 04 Jan 2008) | 3 lines
Author: bugman
Date: Fri Jan 4 18:30:19 2008
New Revision: 4335
URL: http://svn.gna.org/viewcvs/relax?rev=4335view=rev
Log:
The RelaxTestRunner is used now with the --unit-tests command line option.
Modified:
1.3/relax
Modified: 1.3/relax
URL:
Author: bugman
Date: Sat Jan 5 17:20:36 2008
New Revision: 4340
URL: http://svn.gna.org/viewcvs/relax?rev=4340view=rev
Log:
Created a class called System_test_runner for executing the system/functional
tests.
Whether this is replaced by Gary's Unit_test_runner, invokes Unit_test_runner,
or is
@@
-###
-# #
-# Copyright (C) 2006-2008 Edward d'Auvergne #
-# #
-# This file is part of the program relax
Author: bugman
Date: Sat Jan 5 17:10:10 2008
New Revision: 4339
URL: http://svn.gna.org/viewcvs/relax?rev=4339view=rev
Log:
Removed the pipe creation test from the old system/functional test framework.
Modified:
1.3/test_suite/system_tests/main.py
Modified:
/pipe_create.py Sat Jan 5 17:09:45 2008
@@ -1,6 +1,6 @@
###
# #
-# Copyright (C) 2006-2007 Edward d'Auvergne
Author: bugman
Date: Sat Jan 5 17:50:15 2008
New Revision: 4343
URL: http://svn.gna.org/viewcvs/relax?rev=4343view=rev
Log:
Added the ability to run the new system/functional tests based on the unittest
framework.
Modified:
1.3/test_suite/system_tests/__init__.py
Modified:
Author: bugman
Date: Sat Jan 5 17:52:24 2008
New Revision: 4344
URL: http://svn.gna.org/viewcvs/relax?rev=4344view=rev
Log:
Bug fix for the pipe creation system test.
The __init__ function should not be overwritten! The relax instance must be
passed in by some other
method.
Modified:
Author: bugman
Date: Sat Jan 5 17:37:41 2008
New Revision: 4342
URL: http://svn.gna.org/viewcvs/relax?rev=4342view=rev
Log:
Added some code to execute the new system/functional tests.
This just runs the System_test_runner.run() method which doesn't do anything
yet.
Modified:
Author: bugman
Date: Sat Jan 5 18:01:08 2008
New Revision: 4345
URL: http://svn.gna.org/viewcvs/relax?rev=4345view=rev
Log:
Placed the relax namespace into the new system tests.
The relax namespace will now be available to all new TestCase class instances.
Modified:
Author: bugman
Date: Sat Jan 5 18:01:50 2008
New Revision: 4346
URL: http://svn.gna.org/viewcvs/relax?rev=4346view=rev
Log:
Removed the unused 'runner' argument to System_test_runner.run().
Modified:
1.3/test_suite/system_tests/__init__.py
Modified: 1.3/test_suite/system_tests/__init__.py
Author: bugman
Date: Sat Jan 5 18:03:00 2008
New Revision: 4347
URL: http://svn.gna.org/viewcvs/relax?rev=4347view=rev
Log:
Fixed the reference to the now non-existent 'pipe' variable.
Modified:
1.3/test_suite/system_tests/test_pipe_create.py
Modified:
==
--- 1.3/test_suite/runner.py (original)
+++ 1.3/test_suite/runner.py (removed)
@@ -1,83 +1,0 @@
-###
-# #
-# Copyright (C) 2006 Edward
Author: bugman
Date: Sat Jan 5 18:12:16 2008
New Revision: 4352
URL: http://svn.gna.org/viewcvs/relax?rev=4352view=rev
Log:
The results of the new system/functional test framework is now returned.
Modified:
1.3/test_suite/system_tests/__init__.py
Modified:
Author: bugman
Date: Sat Jan 5 18:04:53 2008
New Revision: 4348
URL: http://svn.gna.org/viewcvs/relax?rev=4348view=rev
Log:
System_test_runner.run() is no longer called with the runner argument.
Modified:
1.3/test_suite/runner.py
Modified: 1.3/test_suite/runner.py
URL:
Author: bugman
Date: Sat Jan 5 18:06:32 2008
New Revision: 4349
URL: http://svn.gna.org/viewcvs/relax?rev=4349view=rev
Log:
Added the missing import of the relax data storage object into the pipe
creation system test.
Modified:
1.3/test_suite/system_tests/test_pipe_create.py
Modified:
Author: bugman
Date: Sat Jan 5 18:09:29 2008
New Revision: 4350
URL: http://svn.gna.org/viewcvs/relax?rev=4350view=rev
Log:
Shifted to RelaxTestRunner for the new system/functional tests to catch STDOUT.
Modified:
1.3/test_suite/system_tests/__init__.py
Modified:
19:02:54 2008
@@ -1,6 +1,6 @@
###
# #
-# Copyright (C) 2006-2007 Edward d'Auvergne #
+# Copyright (C) 2006-2008
/test_suite_runner.py Sat Jan 5 18:41:07 2008
@@ -1,6 +1,6 @@
###
# #
-# Copyright (C) 2006 Edward d'Auvergne
Author: bugman
Date: Sat Jan 5 19:19:01 2008
New Revision: 4360
URL: http://svn.gna.org/viewcvs/relax?rev=4360view=rev
Log:
Converted the CSA and bond length value setting test to the new system test
framework.
Modified:
1.3/test_suite/system_tests/model_free.py
Modified:
Author: bugman
Date: Sat Jan 5 19:13:30 2008
New Revision: 4358
URL: http://svn.gna.org/viewcvs/relax?rev=4358view=rev
Log:
Converted the CSA value setting test to the new framework.
Modified:
1.3/test_suite/system_tests/model_free.py
Modified: 1.3/test_suite/system_tests/model_free.py
Author: bugman
Date: Sat Jan 5 19:09:42 2008
New Revision: 4357
URL: http://svn.gna.org/viewcvs/relax?rev=4357view=rev
Log:
Bug fix for the new system/functional test framework.
Now all tests from all TestCase instances are run.
Modified:
1.3/test_suite/system_tests/__init__.py
Modified:
Author: bugman
Date: Sat Jan 5 19:16:20 2008
New Revision: 4359
URL: http://svn.gna.org/viewcvs/relax?rev=4359view=rev
Log:
Converted the Bond length value setting test to the new system test framework.
Modified:
1.3/test_suite/system_tests/model_free.py
Modified:
Author: bugman
Date: Sat Jan 5 20:09:19 2008
New Revision: 4361
URL: http://svn.gna.org/viewcvs/relax?rev=4361view=rev
Log:
Converted all of the model-free system/functional tests to the new unittest
framework.
Modified:
1.3/test_suite/system_tests/model_free.py
[This mail would be too
@@
###
# #
-# Copyright (C) 2006-2007 Edward d'Auvergne #
+# Copyright (C) 2006-2008 Edward d'Auvergne
@@
###
# #
-# Copyright (C) 2006-2007 Edward d'Auvergne #
+# Copyright (C) 2006-2008 Edward d'Auvergne
/angles.py Sat Jan 5 20:25:44 2008
@@ -1,6 +1,6 @@
###
# #
-# Copyright (C) 2006-2007 Edward d'Auvergne
Author: bugman
Date: Sat Jan 5 21:06:44 2008
New Revision: 4370
URL: http://svn.gna.org/viewcvs/relax?rev=4370view=rev
Log:
The sequence system/functional tests are now run.
Modified:
1.3/test_suite/system_tests/__init__.py
Modified: 1.3/test_suite/system_tests/__init__.py
URL:
(removed)
@@ -1,44 +1,0 @@
-###
-# #
-# Copyright (C) 2006-2008 Edward d'Auvergne
(C) 2006 Chris MacRaild #
-# Copyright (C) 2007 Edward d'Auvergne#
+# Copyright (C) 2007-2008 Edward d'Auvergne
@@
-###
-# #
-# Copyright (C) 2006-2007 Edward d'Auvergne #
-# #
-# This file is part of the program relax
Author: bugman
Date: Sat Jan 5 23:27:48 2008
New Revision: 4372
URL: http://svn.gna.org/viewcvs/relax?rev=4372view=rev
Log:
Bug fix in the angles calculation system test.
Modified:
1.3/test_suite/system_tests/angles.py
Modified: 1.3/test_suite/system_tests/angles.py
URL:
Author: bugman
Date: Sat Jan 5 23:30:36 2008
New Revision: 4373
URL: http://svn.gna.org/viewcvs/relax?rev=4373view=rev
Log:
Merged revisions 4338-4371 via svnmerge from
svn+ssh://[EMAIL PROTECTED]/svn/relax/1.3
r4338 | bugman | 2008-01-05 17:09:45 +0100 (Sat, 05 Jan 2008) | 3 lines
Author: bugman
Date: Sat Jan 5 23:58:30 2008
New Revision: 4376
URL: http://svn.gna.org/viewcvs/relax?rev=4376view=rev
Log:
Shifted all the gyromagnetic ratio values into the physical constants file.
Modified:
1.3/generic_fns/nuclei.py
1.3/physical_constants.py
Modified:
Author: bugman
Date: Sat Jan 5 23:33:38 2008
New Revision: 4374
URL: http://svn.gna.org/viewcvs/relax?rev=4374view=rev
Log:
Bug fix for the system tests calling the state.load() user function.
The 'file' argument is now called 'state'.
Modified:
1.3/test_suite/system_tests/model_free.py
Author: bugman
Date: Sun Jan 6 00:22:00 2008
New Revision: 4377
URL: http://svn.gna.org/viewcvs/relax?rev=4377view=rev
Log:
Wrote 12 unit tests for using the value setting functions to set the hetero and
homonuclei.
This is in preparation for replacing the nuclei() user function with the more
Author: bugman
Date: Sun Jan 6 00:37:50 2008
New Revision: 4379
URL: http://svn.gna.org/viewcvs/relax?rev=4379view=rev
Log:
Removed all the setting of the homonucleus unit tests.
Modified:
1.3/test_suite/unit_tests/value_testing_base.py
Modified:
Author: bugman
Date: Sun Jan 6 00:36:43 2008
New Revision: 4378
URL: http://svn.gna.org/viewcvs/relax?rev=4378view=rev
Log:
Updated the model-free code to handle a spin system specific 'nucleus' variable.
Modified:
1.3/specific_fns/model_free/model_free.py
Modified:
Author: bugman
Date: Sun Jan 6 00:40:49 2008
New Revision: 4380
URL: http://svn.gna.org/viewcvs/relax?rev=4380view=rev
Log:
Fixed all the unit tests of setting the heteronucleus type.
The variable will be called 'nucleus' and not 'heteronuc'.
Modified:
/base_class.py Sun Jan 6 01:05:05 2008
@@ -1,6 +1,6 @@
###
# #
-# Copyright (C) 2004, 2006-2007 Edward d'Auvergne
Author: bugman
Date: Sun Jan 6 01:10:34 2008
New Revision: 4386
URL: http://svn.gna.org/viewcvs/relax?rev=4386view=rev
Log:
Updated the value.set() user function to accept string values of the 'value'
variable.
Two new RelaxErrors have been created for this.
Modified:
1.3/prompt/value.py
901 - 1000 of 19069 matches
Mail list logo
