Bonjour sage-release,
On Wednesday, April 2, 2014 2:09:20 AM UTC+2, Volker Braun wrote:
Get it from the develop git branch or the source tarball at
http://boxen.math.washington.edu/home/release/sage-6.2.beta6/sage-6.2.beta6.tar.gz
I get an error while building matplotlib1-3.1. It seems
On Thursday, May 8, 2014 9:54:58 PM UTC+2, Peter Bruin wrote:
Hello,
It looks like (the automatically generated) distances_all_pairs.c is the
result of an interrupted/failed Cython compilaton. My copy of that file is
14706 lines long and the last line is
#endif /* Py_PYTHON_H */
On Thursday, May 8, 2014 11:17:53 PM UTC+2, Peter Bruin wrote:
The Cython cache seems to be ~/.cycache/, at least on my system.
thanks! now it works :
[...]
Updating Cython code
Compiling sage/graphs/distances_all_pairs.pyx because it changed.
Cythonizing
On Ubuntu 14.04 x86_64, after updating to github master and running make
distclean, sage-6.7 builds fine and starts, documentation builds fine but
make ptestlong finishes with 220 files having failing doctests all of them
related to missing optional package (I think make distclean removes them
On Tuesday, May 19, 2015 at 10:12:23 AM UTC+2, Jeroen Demeyer wrote:
Did you run make ptestlong or make ptestall?
You are right. I did make ptestall.
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On ubuntu 14.04 64 bit make ptestlong gives 266 files with 1 failing
doctest, always the same warning:
sage -t --long src/doc/de/thematische_anleitungen/sage_gymnasium.rst
**
File
On Thursday, April 16, 2015 at 11:05:11 AM UTC+2, Dima Pasechnik wrote:
chmod 700 ~/.sage/.python-eggs
should fix this
Indeed:
All tests passed!
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On Wednesday, April 8, 2015 at 1:35:04 PM UTC+2, Volker Braun wrote:
bzip2 installed /Users/seb/Applications/sage/local/lib/libbz2.la, but it
seems to be gone now. Who deleted it?
Nobody, it is still there. Thanks for the follow up. I now understand what
is happening. Not only I changed my
On Wednesday, April 8, 2015 at 12:01:29 PM UTC+2, Sébastien Labbé wrote:
I get an error with libgd while compiling sage-6.6.rc2 on this machine:
Maybe I have an hypothesis for this error... I am currently reinstalling
everything from scratch on my machine after I changed the hard disk
On Wednesday, April 8, 2015 at 12:20:04 PM UTC+2, Volker Braun wrote:
post the bzip2 install log
The bzip2 install log is attached. It was successful finishing with:
real0m16.313s
user0m12.348s
sys 0m7.020s
Successfully installed bzip2-1.0.6.20140317
Deleting temporary
Is there a way to sage -i all optional packages that are used the
doctests of the whole sage library?
Should make ptestall do that before running tests?
On Tuesday, May 19, 2015 at 10:17:17 AM UTC+2, Sébastien Labbé wrote:
On Tuesday, May 19, 2015 at 10:12:23 AM UTC+2, Jeroen Demeyer wrote
1 - On the first compilation, I get:
[algebras ] writing output... [ 96%]
sage/algebras/steenrod/steenrod_algebra_mult
[algebras ] writing output... [100%] sage/algebras/weyl_algebra
[algebras ] dumping object inventory... done
[algebras ] build succeeded.
[graphs ] reading sources... [ 73%]
On OSX 10.10.2, Xcode 6.3, make ptestlong finishes with:
--
sage -t --long src/sage/doctest/test.py # Timed out after testing finished
--
which is not
On Ubuntu 14.04 64 bit and using
--
which is not reproducible. Also, I confirm that I also get the display
latex problem cited above:
> ./sage -n jupyter
> In[1]: %display latex
> In[2]: sin(x^2)
> results in
> Out[2]: \newcommand{\Bold}[1]{\mathbf{#1}}\sin\left(x^{2}\right)
Sébastien Labbé
On Wednesday, October 7, 201
Running make ptestlong on Ubuntu 14.04 and using
But the one in doctest/test.py keeps being there.
--
sage -t --long --warn-long 29.8 src/sage/doctest/test.py # 1 doctest
failed
Needs review at:
http://trac.sagemath.org/ticket/18873
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On Ubuntu 14.04 64 bit,
Using
Similarly,
sage: len(str('a'))
1
sage: len(repr('a'))
3
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With optional sage packages coxeter3 and cryptominisat, I get some optional
doctests that are broken:
--
sage -t --warn-long 27.7
src/sage/rings/polynomial/multi_polynomial_sequence.py # 1 doctest failed
sage -t --warn-long
On Friday, November 27, 2015 at 3:49:49 PM UTC+1, Sébastien Labbé wrote:
>
> With optional sage packages coxeter3 and cryptominisat, I get some
> optional doctests that are broken:
>
> --
> sage -t --warn-lon
On Ubuntu 14.04 64 bit
Using --optional=gcc,mpir,python2,sage
make ptestlong finishes with
labbe@priminfo sage-git $ tail logs/ptestlong.log
sage -t --long --warn-long 27.1 src/sage_setup/docbuild/sphinxbuild.py
[0 tests, 0.00 s]
sage -t --long --warn-long 27.1
On Ubuntu 16.04,
Using --optional=4ti2,atlas,ccache,meataxe,mpir,pandocfilters,python2,sage
make ptestlong finishes with:
sage -t --long --warn-long 42.7 src/sage/matrix/matrix_integer_dense.pyx
Timed out (and interrupt failed)
Using --optional=4ti2,atlas,mpir,python2,sage on Ubuntu 16.04
make ptestlong finishes with "All tests passed".
Thank you!
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All tests passed on Ubuntu 14.04 with make ptestlong using
--optional=mpir,python2,sage
Other than the Tutte polynomial one, I get two other slow doctests that are
not marked with #long time. I can not confirm whether it is a regression as
I don't keep my old version of sage.
sage -t --long
On Ubuntu 16.04, Using
--optional=4ti2,atlas,ccache,meataxe,mpir,pandoc_attributes,pandocfilters,python2,sage
make ptestlong finishes with
sage -t --long --warn-long 42.6 src/sage/modular/hecke/module.py
Timed out
**
Tests
On Wednesday, October 12, 2016 at 10:02:40 AM UTC+2, Jeroen Demeyer wrote:
>
>
> Thanks for your report. I saw this error on two of the patchbots too.
>
> Are you using the Sage-installed GCC package? What is the output of
>
> $ ./sage --sh -c 'which gfortran; gfortran --version'
>
$ ./sage
On Wednesday, October 12, 2016 at 12:22:32 PM UTC+2, François wrote:
>
> I pushed a branch on that ticket to fix what I suspect is
> the problem.
> If it fixes it, I’ll push upstream since it is a problem
> in their default makefile.
>
>
Branch posted on #21689 fixes it! Thanks!
Sébastien
>From branch 7.4.rc0 + #21689, I checked out branch 7.4.rc1 and "make start"
works because "openblas" was not recompiled (why?).
But on branch 7.4.rc1, if I force compilation of openblas with "sage -f
openblas", then I get the same problem I reported yesterday in the 7.4.rc0
thread.
> Therefore, I will mark #21689 as a blocker so that it gets included in 7.4.
>
... I just realized Jeroen already set #21689 as blocker when he created
the ticket.
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On Ubuntu 16.04, I get an error building the documentation (even after make
doc-clean && make):
[manifolds]
/home/labbe/Applications/sage-git/src/doc/en/reference/manifolds/index.rst:4:
WARNING: undefined label: tensors-on-free-modules (if the link has no
caption the label must precede a
Thank you very much Thierry. It was of great help during Sage Days 79.
I also used it recently on a old windows computer not connected to the
internet. It gives a second life to this machine:)
Sébastien
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>
> make ptestlong creates two sage.png file due to #21947 (I will create a
> ticket to fix this shortly)
>
https://trac.sagemath.org/ticket/22009
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On OSX 10.10.2, I get two errors with make ptestlong (only the one with
singular.py reappears on a rerun) :
sage -t --long --warn-long 263.5 src/sage/misc/trace.py
**
File "src/sage/misc/trace.py", line 66, in
On Tuesday, November 29, 2016 at 11:25:40 AM UTC+1, Sébastien Labbé wrote:
>
> On Ubuntu 16.04, I get an error building the documentation (even after
> make doc-clean && make):
>
I had uncommited changes in my repo (reverting cython version to 0.24 for
testing purpo
> ImportError: No module named interpreters.wrapper_rdf
>
> Again, Eek!
> Justin
>
It was also reported in
Cannot build Sage 7.5.beta6 inside Docker, Dec 16, 2016
https://groups.google.com/d/topic/sage-devel/JkUfCPxoi80/discussion
The part " 'sage_setup.docbuild' is a package and cannot
On Ubuntu 16.04, git pull develop from 7.5.beta6 and make ptestlong has
only one failing (timed out) test:
sage: from sage.doctest.external import has_mathematica ## line 111 ##
sage: has_mathematica() # random ## line 112 ##
On Thursday, March 23, 2017 at 9:07:54 AM UTC+1, vdelecroix wrote:
>
> On 13/02/2017 14:32, Sébastien Labbé wrote:
> >
> > Also git status now tells me I have this file in SAGE_ROOT:
> >
> > octave-workspace
> >
> > ?
>
> How did you
On Ubuntu 16.04, make ptestlong finishes with two doctest failures that
were already reported on this mailing list. Both doctests pass when run
separately.
--
sage -t --long --warn-long 61.4
On OSX 10.10 Yosemite, without #22860, make ptestlong yields only one
failed already reported doctest:
NotImplementedError: Unable to parse Giac output:
integrate(t^n*exp(-s*t),t,0,+infinity)
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On osx 10.10, make ptestlong gives 2 doctest errors (which are not
reproducible):
sage -t --long src/sage/tests/cmdline.py
**
File "src/sage/tests/cmdline.py", line 208, in
sage.tests.cmdline.test_executable
Failed example:
> Thanks Volker! This is indeed the case: I've recently added the line
> %colors Linux
> to the file ~/.sage/init.sage
> Removing it fixes the problem.
>
It is better to set colors Linux in the file
profile_default/ipython_config.py
see
On osx 10.10, make ptestlong gives: All test passed!
On Ubuntu 16.04, make ptestlong gives
--
sage -t --long --warn-long 61.1 src/sage/sat/boolean_polynomials.py # 1
doctest failed
On a recent dell machine running Ubuntu 16.06, I get one failing test
during make ptestlong. The test pass when run alone :
sage -t --long src/sage/libs/gap/assigned_names.py
**
File "src/sage/libs/gap/assigned_names.py", line
On Ubuntu 16.04 make ptestlong gives All tests passed!
Thank you,
Sébastien
On Sunday, October 22, 2017 at 7:22:18 PM UTC+2, Volker Braun wrote:
>
> As always, you can get the latest beta version from the "develop" git
> branch. Alternatively, the self-contained source tarball is at
>
On Ubuntu 16.04, I get problem building python2-2.7.14.p2 during make
ptestlong.
The error is reproducable when I perform sage -i python2
End of log is below
...
gcc -pthread -shared -L. -L/home/slabbe/GitBox/sage/local/lib
-Wl,-rpath,/home/slabbe/GitBox/sage/local/lib -L.
> ImportError: No module named _ctypes
> ctypes module failed to import
> math module imported OK
> hashlib module imported OK
> crypt module imported OK
> readline module imported OK
> socket module imported OK
> Error: One or more modules failed to import.
>
> real2m25.869s
> user
... and I get "All tests passed!" after make ptestlong. Thank you.
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I get 5 failing # optional - rst2ipynb doctests.
log below.
--
sage -t --long --warn-long 59.5 src/sage/tests/cmdline.py # 5 doctests
failed
--
sage -t
On Tuesday, May 15, 2018 at 9:24:26 PM UTC+2, Sébastien Labbé wrote:
>
> On Ubuntu 16.04, the command `./sage -t -p --all --long
> --optional=sage,optional,external` finishes with:
>
> --
> sage -t --lo
On Ubuntu 16.04, the command `./sage -t -p --all --long
--optional=sage,optional,external` finishes with:
--
sage -t --long src/sage/coding/code_constructions.py # 1 doctest failed
> this is a typical symptom of trying to link a wrong version of libpng.
>
Yes, but why does the `sage -f libpng` was not forced since it was
necessary? I am not an expert at all on this, but from my point of view, it
is like if there was problem with dependencies of giac.
>
> But what
> ... still running.
>
> make ptestlong eventually finished with:
--
All tests passed!
--
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On Ubuntu 16.04, my first attempt at running make finishes with a problem
with giac (undefined reference to `png_set_longjmp_fn')
The log finishes with:
...
[giac-1.4.9.45.p2] libtool: link: g++ -g -O2 -fno-strict-aliasing
-DGIAC_GENERIC_CONSTANTS -Wl,-rpath
Running optional and external doctests:
Using
--optional=bliss,cbc,ccache,cmake,dot2tex,external,gmpy2,lrslib,memlimit,mpir,notedown,pandoc_attributes,python2,rst2ipynb,sage
External software detected for doctesting:
ffmpeg,graphviz,gurobi,imagemagick,internet,latex,pandoc
I get:
The command:
./sage -t -p --all --long --optional=sage,optional,external
Using
--optional=bliss,cbc,ccache,cmake,dot2tex,external,gmpy2,lrslib,memlimit,mpir,notedown,pandoc_attributes,python2,rst2ipynb,sage
External software detected for doctesting:
On Ubuntu 16.04, the command
sage -t --all --optional=sage,optional,external
tests the following optional and external doctests:
Using
--optional=bliss,cbc,ccache,cmake,dot2tex,external,gmpy2,lrslib,memlimit,mpir,normaliz,notedown,pandoc_attributes,pycosat,pynormaliz,python2,rst2ipynb,sage
On Ubuntu 16.04, the command
sage -t --all --optional=sage,optional,external
tests the following optional and external doctests:
Using
--optional=bliss,cbc,ccache,cmake,dot2tex,external,gmpy2,lrslib,memlimit,mpir,normaliz,notedown,pandoc_attributes,pycosat,pynormaliz,python2,rst2ipynb,sage
Running tests on Ubuntu 16.04, with --optional=sage,optional,external, I get
Using
--optional=bliss,cbc,ccache,cmake,dot2tex,external,gmpy2,lrslib,memlimit,mpir,normaliz,notedown,pandoc_attributes,pycosat,pynormaliz,python2,rst2ipynb,sage
External software detected for doctesting:
WIth Ubuntu 16.04,
Runing test with --optional=sage,optional,external, I get
Using
--optional=bliss,cbc,ccache,cmake,dot2tex,external,gmpy2,lrslib,memlimit,mpir,normaliz,notedown,pandoc_attributes,pycosat,pynormaliz,python2,rst2ipynb,sage
External software detected for doctesting:
With Ubuntu 16.04, running
sage -t --optional=sage,optional,external --all
I get
Using
--optional=bliss,cbc,ccache,cmake,dot2tex,external,gmpy2,lrslib,memlimit,mpir,normaliz,notedown,pandoc_attributes,pycosat,pynormaliz,python2,rst2ipynb,sage
External software detected for doctesting:
Using
--optional=bliss,cbc,ccache,cmake,cryptominisat,dot2tex,external,glucose,gmpy2,lrslib,memlimit,mpir,normaliz,notedown,pandoc_attributes,pycosat,pynormaliz,python2,rst2ipynb,sage
External software detected for doctesting:
ffmpeg,graphviz,gurobi,imagemagick,internet,latex,pandoc
I get:
Testing with --optional=sage,optional,external
with
Using
--optional=bliss,cbc,ccache,cmake,cryptominisat,dot2tex,external,glucose,lrslib,memlimit,mpir,normaliz,notedown,pandoc_attributes,pycosat,pynormaliz,python2,rst2ipynb,sage
External software detected for doctesting:
Running test with --optional=sage,optional,external
I get
External software detected for doctesting:
ffmpeg,graphviz,gurobi,imagemagick,internet,latex,pandoc
boolean_polynomial failure is not reproducable
Using
Running tests on few optional + external packages, I get:
--
sage -t --long src/sage/sat/boolean_polynomials.py # 1 doctest failed
sage -t --long src/sage/combinat/designs/ext_rep.py # 1 doctest failed
sage -t --long
Runing ptestlong with --optional=sage,optional,external
i.e. testing the following packages:
Using
Runing ptestlong with --optional=sage,optional,external, I get
Using
--optional=bliss,cbc,ccache,cmake,cryptominisat,dot2tex,external,glucose,gmpy2,lrslib,memlimit,mpir,normaliz,notedown,pandoc_attributes,pycosat,pynormaliz,python2,rst2ipynb,sage
External software detected for doctesting:
Running tests with few optional and external doctests, I get:
Using
--optional=bliss,cbc,ccache,cmake,cryptominisat,dot2tex,external,glucose,gmpy2,lrslib,memlimit,mpir,normaliz,notedown,pandoc_attributes,pycosat,pynormaliz,python2,rst2ipynb,sage
External software detected for doctesting:
I did not run any make test yet, but if I try to create a new notebook in
Jupyter I get an error page saying "500 : Internal Server Error" and the
error being printed in the terminal says
ImportError: No module named defusedxml
It is copied below:
[I 09:59:24.941 NotebookApp] Creating
On Thursday, January 24, 2019 at 10:03:07 AM UTC+1, Sébastien Labbé wrote:
>
> I did not run any make test yet, but if I try to create a new notebook in
> Jupyter I get an error page saying "500 : Internal Server Error" and the
> error being printed in the terminal sa
Runing tests with --optional=sage,optional,external, I get:
Using
--optional=bliss,cbc,ccache,cmake,cryptominisat,dot2tex,external,glucose,gmpy2,lrslib,memlimit,mpir,normaliz,notedown,pandoc_attributes,pycosat,pynormaliz,python2,rst2ipynb,sage
External software detected for doctesting:
Now that I managed to installed pynormaliz, I could run the doctests
including the below optional/external ones:
Using
On another machine (on which I did not updated sage since a long time), I
get trouble with documentation:
[dochtml] OSError:
/home/slabbe/GitBox/sage/local/lib/python2.7/site-packages/sage/graphs/generic_graph.py:docstring
of sage.graphs.generic_graph.GenericGraph.longest_path:72: WARNING:
After fixing the pynormaliz issue myself, I may run optional and external
doctests, and I get:
--
sage -t --long src/sage/combinat/designs/ext_rep.py # 1 doctest failed
sage -t --long src/sage/databases/findstat.py # 8
Testing the following optional and external packages:
External software detected for doctesting:
ffmpeg,graphviz,gurobi,imagemagick,internet,latex,pandoc
Using
Runing optional/external doctests, more specifically with the following
ones:
Using
My first try at installing finishes with an error installing the
(optional?) package pynormaliz
***
Error building Sage.
The following package(s) may have failed to build (not necessarily
during this run of 'make all-start'):
*
On Thursday, May 23, 2019 at 9:15:44 PM UTC+2, vdelecroix wrote:
>
> Could you check whether there is a config.log in
>
> /home/slabbe/GitBox/sage/local/var/tmp/sage/build/pynormaliz-2.5
>
> and if so attach it.
>
I am answering here: https://trac.sagemath.org/ticket/27731#comment:27
--
2 items had failures:
>3 of 5 in
> sage.databases.findstat.FindStatStatistic.generating_functions
>2 of 4 in sage.databases.findstat.FindStatStatistic.oeis_search
> 7 webbrowser tests not run
> 0 tests not run because we ran out of time
> [249 tests, 5 failures, 54.68 s]
On Ubuntu 16.04, upgrading to most recent sage develop as usual, I can't
get the documentation to build. I can reproduce the issue after make
doc-clean. It stops at
...
[dochtml] installing. Log file: logs/dochtml.log
[dochtml] error installing, exit status 1. Log file: logs/dochtml.log
>
>
> --
> sage -t --long src/sage/databases/oeis.py # 6 doctests failed
> sage -t --long src/sage/symbolic/integration/external.py # 1 doctest
> failed
> sage -t --long src/sage/misc/package.py # 2 doctests failed
> sage -t
Running tests with several optional and external packages, I get:
Using
Sorry for the late report on 8.8, but it may be useful for comparison
between releases.
Testing the following optional and external packages
External software detected for doctesting:
ffmpeg,graphviz,gurobi,imagemagick,internet,latex,pandoc
Using
Running tests with optional=sage,optional,external I get
Using
--optional=4ti2,bliss,cbc,ccache,cmake,cryptominisat,dot2tex,external,glucose,latte_int,lidia,lrslib,memlimit,mpir,ninja_build,normaliz,notedown,pandoc_attributes,pycosat,pynormaliz,python2,qhull,rst2ipynb,sage,topcom
External
On Friday, August 23, 2019 at 6:12:14 PM UTC+2, Sébastien Labbé wrote:
>
>
>
> On Friday, August 23, 2019 at 3:12:54 PM UTC+2, Eric Gourgoulhon wrote:
>>
>> Hello Sebastien,
>>
>> This works for me on Ubuntu 18.04, with both Python 2 and 3 versions of
&g
> It does not work. I will try rebuilding from scratch...
>
After rebuilding from scratch from a git clone, the SSL problem disapeared:
┌┐
│ SageMath version 8.9.beta8, Release Date: 2019-08-25 │
│ Using Python
On Sage 8.9.beta8, running optional and external tests
Using
--optional=awali,cbc,cryptominisat,dot2tex,e_antic,external,glucose,memlimit,normaliz,notedown,openssl,pandoc_attributes,pycosat,pynormaliz,python2,rst2ipynb,sage
I get:
On Wednesday, August 28, 2019 at 4:04:13 AM UTC+2, Samuel Lelievre wrote:
>
>
>
> Le mardi 27 août 2019 22:04:42 UTC+2, Sébastien Labbé a écrit :
>>
>>
>> I reinstalled my openssl which looks recent:
>>
>> (sage-sh) $ openssl version
>> OpenSSL
Bonjour!
With the new version, I have problems fetching the internet:
sage: oeis([3,7,15,1], max_results=4)
Traceback (most recent call last)
...
IOError:
Error fetching
https://oeis.org/search?q=3%2C+7%2C+15%2C+1=0=text=4.
I did my upgrade as usual, so I do not know where is the problem
> > I did my upgrade as usual, so I do not know where is the problem from.
> Am I alone to have this issue? Should I upgrade SSL or something?
>
> This works for me on Debian buster, what OS are you on? And, is it
> python 2 or 3?
>
>
I am running Ubuntu 16.04 with this:
On Friday, August 23, 2019 at 3:12:54 PM UTC+2, Eric Gourgoulhon wrote:
>
> Hello Sebastien,
>
> This works for me on Ubuntu 18.04, with both Python 2 and 3 versions of
> Sage 8.9.beta7.
> Maybe you should upgrade your SSL?
>
Ok I will check this out next week!
Sébastien
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Running ptestlong with few optional + external packages including
Using
--optional=awali,cbc,ccache,cryptominisat,dot2tex,e_antic,external,glucose,memlimit,normaliz,notedown,openssl,pandoc_attributes,pycosat,pynormaliz,python2,rst2ipynb,sage
I obtain:
Runing ptestlong with various optional and external packages, I get
Using
--optional=awali,bliss,cbc,ccache,cryptominisat,dot2tex,e_antic,external,glucose,memlimit,normaliz,notedown,openssl,pandoc_attributes,pycosat,pynormaliz,python2,rst2ipynb,sage
>
> I am unsure whether this might have been caused by the recent changes to
> RecursivelyEnumeratedSet in #27967.
>
I don't think so as the changes in #27967 are not related to the search
forest (and map_reduce.py) code.
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Testing with the following optional/external packages:
External software detected for doctesting:
ffmpeg,graphviz,gurobi,imagemagick,internet,latex,pandoc
Using
I am reporting on the following release from 3 days ago (I am creating a
new thread since it has not been created yet).
┌┐
│ SageMath version 9.0.beta4, Release Date: 2019-11-02 │
│ Using Python 2.7.15. Type
The first try at running make gives me this:
[sagelib-9.0.beta6] make[4] : on entre dans le répertoire
« /home/slabbe/GitBox/sage/src »
[sagelib-9.0.beta6] cd . && export\
[sagelib-9.0.beta6]
SAGE_ROOT=/doesnotexist \
> [sagelib-9.0.beta6] Traceback (most recent call last):
> [sagelib-9.0.beta6] File "setup.py", line 22, in
> [sagelib-9.0.beta6] import fpickle_setup
> [sagelib-9.0.beta6] File
> "/home/slabbe/GitBox/sage/src/fpickle_setup.py", line 8, in
> [sagelib-9.0.beta6] from six.moves
Testing with few optional and external packages, I get
Using
--optional=4ti2,awali,cbc,ccache,cryptominisat,dot2tex,e_antic,external,glucose,latte_int,lidia,lrslib,memlimit,normaliz,notedown,openssl,pandoc_attributes,pycosat,pynormaliz,python2,rst2ipynb,sage
Running ptestlong with optional + external packages, I get
Using
--optional=4ti2,cbc,ccache,cryptominisat,dot2tex,e_antic,external,glucose,latte_int,lidia,lrslib,memlimit,normaliz,notedown,openssl,pandoc_attributes,pycosat,pynormaliz,rst2ipynb,sage,sagenb
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