Thanks for the advice! What seems to work for is is that I define the array type as: "type": { "type": "array", "items": "string", "java-class": "java.util.ArrayList" }It seems to be creating an avro.Generic.List, which spark doesn't know how to serialize, instead of a guava.util.List, which spark likes. Hive at 0.13.1 still can't read it though...Thanks!-Mike
From: Michael Armbrust <mich...@databricks.com> To: Michael Albert <m_albert...@yahoo.com> Cc: "user@spark.apache.org" <user@spark.apache.org> Sent: Tuesday, November 4, 2014 2:37 PM Subject: Re: avro + parquet + vector<string> + NullPointerException while reading You might consider using the native parquet support built into Spark SQL instead of using the raw library: http://spark.apache.org/docs/latest/sql-programming-guide.html#parquet-files On Mon, Nov 3, 2014 at 7:33 PM, Michael Albert <m_albert...@yahoo.com.invalid> wrote: Greetings! I'm trying to use avro and parquet with the following schema:{ "name": "TestStruct", "namespace": "bughunt", "type": "record", "fields": [ { "name": "string_array", "type": { "type": "array", "items": "string" } } ]}The writing process seems to be OK, but when I try to read it with Spark, I get:com.esotericsoftware.kryo.KryoException: java.lang.NullPointerExceptionSerialization trace:string_array (bughunt.TestStruct) at com.esotericsoftware.kryo.serializers.FieldSerializer$ObjectField.read(FieldSerializer.java:626) at com.esotericsoftware.kryo.serializers.FieldSerializer.read(FieldSerializer.java:221) at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:732)When I try to read it with Hive, I get this:Failed with exception java.io.IOException:org.apache.hadoop.hive.ql.metadata.HiveException: java.lang.ClassCastException: org.apache.hadoop.io.BytesWritable cannot be cast to org.apache.hadoop.io.ArrayWritableWhich would lead me to suspect that this might be related to this one: https://github.com/Parquet/parquet-mr/issues/281 , but that one seems to be Hive specific, and I am not seeing Spark read the data it claims to have written itself. I'm running on an Amazon EMR cluster using the "version 2.4.0" hadoop code and spark 1.1.0.Has anyone else observed this sort of behavior? For completeness, here is the code that writes the data:package bughunt import org.apache.hadoop.mapreduce.Job import org.apache.spark.SparkConfimport org.apache.spark.SparkContextimport org.apache.spark.SparkContext._ import parquet.avro.AvroWriteSupportimport parquet.avro.AvroParquetOutputFormatimport parquet.hadoop.ParquetOutputFormat import java.util.ArrayList object GenData { val outputPath = "/user/xxxxx/testdata" val words = List( List("apple", "banana", "cherry"), List("car", "boat", "plane"), List("lion", "tiger", "bear"), List("north", "south", "east", "west"), List("up", "down", "left", "right"), List("red", "green", "blue")) def main(args: Array[String]) { val conf = new SparkConf(true) .setAppName("IngestLoanApplicattion") //.set("spark.kryo.registrator", // classOf[CommonRegistrator].getName) .set("spark.serializer", "org.apache.spark.serializer.KryoSerializer") .set("spark.kryoserializer.buffer.mb", 4.toString) .set("spark.kryo.referenceTracking", "false") val sc = new SparkContext(conf) val rdd = sc.parallelize(words) val job = new Job(sc.hadoopConfiguration) ParquetOutputFormat.setWriteSupportClass(job, classOf[AvroWriteSupport]) AvroParquetOutputFormat.setSchema(job, TestStruct.SCHEMA$) rdd.map(p => { val xs = new java.util.ArrayList[String] for (z<-p) { xs.add(z) } val bldr = TestStruct.newBuilder() bldr.setStringArray(xs) (null, bldr.build()) }) .saveAsNewAPIHadoopFile(outputPath, classOf[Void], classOf[TestStruct], classOf[ParquetOutputFormat[TestStruct]], job.getConfiguration) }} To read the data, I use this sort of code from the spark-shell::paste import bughunt.TestStruct import org.apache.hadoop.mapreduce.Jobimport org.apache.spark.SparkContext import parquet.hadoop.ParquetInputFormatimport parquet.avro.AvroReadSupport def openRddSpecific(sc: SparkContext) = { val job = new Job(sc.hadoopConfiguration) ParquetInputFormat.setReadSupportClass(job, classOf[AvroReadSupport[TestStruct]]) sc.newAPIHadoopFile("/user/malbert/testdata", classOf[ParquetInputFormat[TestStruct]], classOf[Void], classOf[TestStruct], job.getConfiguration)}I start the Spark shell as follows:spark-shell \ --jars ../my-jar-containing-the-class-definitions.jar \ --conf mapreduce.user.classpath.first=true \ --conf spark.kryo.referenceTracking=false \ --conf spark.kryoserializer.buffer.mb=4 \ --conf spark.serializer=org.apache.spark.serializer.KryoSerializer I'm stumped. I can read and write records and maps, but arrays/vectors elude me.Am I missing something obvious? Thanks! Sincerely, Mike Albert