Which version of Spark are you using ?

How did you increase the open file limit ?

Which operating system do you use ?

Please see Example 6. ulimit Settings on Ubuntu under:
http://hbase.apache.org/book.html#basic.prerequisites

On Sun, Apr 24, 2016 at 2:34 AM, fanooos <dev.fano...@gmail.com> wrote:

> I have a spark streaming job that read tweets stream from gnip and write it
> to Kafak.
>
> Spark and kafka are running on the same cluster.
>
> My cluster consists of 5 nodes. Kafka-b01 ... Kafka-b05
>
> Spark master is running on Kafak-b05.
>
> Here is how we submit the spark job
>
> *nohup sh $SPZRK_HOME/bin/spark-submit --total-executor-cores 5 --class
> org.css.java.gnipStreaming.GnipSparkStreamer --master
> spark://kafka-b05:7077
> GnipStreamContainer.jar powertrack
> kafka-b01.css.org,kafka-b02.css.org,kafka-b03.css.org,kafka-b04.css.org,
> kafka-b05.css.org
> gnip_live_stream 2 &*
>
> After about 1 hour the spark job get killed
>
> The logs in the nohub file shows the following exception
>
> /org.apache.spark.storage.BlockFetchException: Failed to fetch block from 2
> locations. Most recent failure cause:
>         at
>
> org.apache.spark.storage.BlockManager$$anonfun$doGetRemote$2.apply(BlockManager.scala:595)
>         at
>
> org.apache.spark.storage.BlockManager$$anonfun$doGetRemote$2.apply(BlockManager.scala:585)
>         at
>
> scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
>         at
> scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47)
>         at
> org.apache.spark.storage.BlockManager.doGetRemote(BlockManager.scala:585)
>         at
> org.apache.spark.storage.BlockManager.getRemote(BlockManager.scala:570)
>         at
> org.apache.spark.storage.BlockManager.get(BlockManager.scala:630)
>         at org.apache.spark.rdd.BlockRDD.compute(BlockRDD.scala:48)
>         at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:306)
>         at org.apache.spark.rdd.RDD.iterator(RDD.scala:270)
>         at
> org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:66)
>         at org.apache.spark.scheduler.Task.run(Task.scala:89)
>         at
> org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:214)
>         at
>
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
>         at
>
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
>         at java.lang.Thread.run(Thread.java:745)
> Caused by: io.netty.channel.ChannelException: Unable to create Channel from
> class class io.netty.channel.socket.nio.NioSocketChannel
>         at
>
> io.netty.bootstrap.AbstractBootstrap$BootstrapChannelFactory.newChannel(AbstractBootstrap.java:455)
>         at
>
> io.netty.bootstrap.AbstractBootstrap.initAndRegister(AbstractBootstrap.java:306)
>         at io.netty.bootstrap.Bootstrap.doConnect(Bootstrap.java:134)
>         at io.netty.bootstrap.Bootstrap.connect(Bootstrap.java:116)
>         at
>
> org.apache.spark.network.client.TransportClientFactory.createClient(TransportClientFactory.java:211)
>         at
>
> org.apache.spark.network.client.TransportClientFactory.createClient(TransportClientFactory.java:167)
>         at
>
> org.apache.spark.network.netty.NettyBlockTransferService$$anon$1.createAndStart(NettyBlockTransferService.scala:90)
>         at
>
> org.apache.spark.network.shuffle.RetryingBlockFetcher.fetchAllOutstanding(RetryingBlockFetcher.java:140)
>         at
>
> org.apache.spark.network.shuffle.RetryingBlockFetcher.start(RetryingBlockFetcher.java:120)
>         at
>
> org.apache.spark.network.netty.NettyBlockTransferService.fetchBlocks(NettyBlockTransferService.scala:99)
>         at
>
> org.apache.spark.network.BlockTransferService.fetchBlockSync(BlockTransferService.scala:89)
>         at
>
> org.apache.spark.storage.BlockManager$$anonfun$doGetRemote$2.apply(BlockManager.scala:588)
>         ... 15 more
> Caused by: io.netty.channel.ChannelException: Failed to open a socket.
>         at
>
> io.netty.channel.socket.nio.NioSocketChannel.newSocket(NioSocketChannel.java:62)
>         at
>
> io.netty.channel.socket.nio.NioSocketChannel.<init>(NioSocketChannel.java:72)
>         at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native
> Method)
>         at
>
> sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
>         at
>
> sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
>         at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
>         at java.lang.Class.newInstance(Class.java:442)
>         at
>
> io.netty.bootstrap.AbstractBootstrap$BootstrapChannelFactory.newChannel(AbstractBootstrap.java:453)
>         ... 26 more
> Caused by: java.net.SocketException: Too many open files
>         at sun.nio.ch.Net.socket0(Native Method)
>         at sun.nio.ch.Net.socket(Net.java:411)
>         at sun.nio.ch.Net.socket(Net.java:404)
>         at sun.nio.ch.SocketChannelImpl.<init>(SocketChannelImpl.java:105)
>         at
>
> sun.nio.ch.SelectorProviderImpl.openSocketChannel(SelectorProviderImpl.java:60)
>         at
>
> io.netty.channel.socket.nio.NioSocketChannel.newSocket(NioSocketChannel.java:60)
>         ... 33 more/
>
>
> I have increased the maximum number of open files but I am still facing the
> same issue.
>
> When I checked the stderr logs of the workers from spark web interface I
> found another exception.
>
> /java.nio.channels.ClosedChannelException
>         at kafka.network.BlockingChannel.send(BlockingChannel.scala:110)
>         at kafka.producer.SyncProducer.liftedTree1$1(SyncProducer.scala:75)
>         at
>
> kafka.producer.SyncProducer.kafka$producer$SyncProducer$$doSend(SyncProducer.scala:74)
>         at kafka.producer.SyncProducer.send(SyncProducer.scala:119)
>         at
> kafka.client.ClientUtils$.fetchTopicMetadata(ClientUtils.scala:59)
>         at
> kafka.producer.BrokerPartitionInfo.updateInfo(BrokerPartitionInfo.scala:82)
>         at
>
> kafka.producer.BrokerPartitionInfo.getBrokerPartitionInfo(BrokerPartitionInfo.scala:49)
>         at
>
> kafka.producer.async.DefaultEventHandler.kafka$producer$async$DefaultEventHandler$$getPartitionListForTopic(DefaultEventHandler.scala:188)
>         at
>
> kafka.producer.async.DefaultEventHandler$$anonfun$partitionAndCollate$1.apply(DefaultEventHandler.scala:152)
>         at
>
> kafka.producer.async.DefaultEventHandler$$anonfun$partitionAndCollate$1.apply(DefaultEventHandler.scala:151)
>         at
>
> scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
>         at
> scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47)
>         at
>
> kafka.producer.async.DefaultEventHandler.partitionAndCollate(DefaultEventHandler.scala:151)
>         at
>
> kafka.producer.async.DefaultEventHandler.dispatchSerializedData(DefaultEventHandler.scala:96)
>         at
>
> kafka.producer.async.DefaultEventHandler.handle(DefaultEventHandler.scala:73)
>         at kafka.producer.Producer.send(Producer.scala:77)
>         at kafka.javaapi.producer.Producer.send(Producer.scala:33)
>         at
>
> org.css.java.gnipStreaming.GnipSparkStreamer$1$1.call(GnipSparkStreamer.java:59)
>         at
>
> org.css.java.gnipStreaming.GnipSparkStreamer$1$1.call(GnipSparkStreamer.java:51)
>         at
>
> org.apache.spark.api.java.JavaRDDLike$$anonfun$foreachPartition$1.apply(JavaRDDLike.scala:225)
>         at
>
> org.apache.spark.api.java.JavaRDDLike$$anonfun$foreachPartition$1.apply(JavaRDDLike.scala:225)
>         at
>
> org.apache.spark.rdd.RDD$$anonfun$foreachPartition$1$$anonfun$apply$33.apply(RDD.scala:920)
>         at
>
> org.apache.spark.rdd.RDD$$anonfun$foreachPartition$1$$anonfun$apply$33.apply(RDD.scala:920)
>         at
>
> org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:1858)
>         at
>
> org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:1858)
>         at
> org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:66)
>         at org.apache.spark.scheduler.Task.run(Task.scala:89)
>         at
> org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:214)
>         at
>
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
>         at
>
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
>         at java.lang.Thread.run(Thread.java:745)/
>
> The second exception (as it seems) is related to Kafka not spark.
>
> What do you think the problem is?
>
>
>
>
>
> --
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> http://apache-spark-user-list.1001560.n3.nabble.com/Spark-Streaming-Job-get-killed-after-running-for-about-1-hour-tp26823.html
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>
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