Are you fitting the VectorIndexer to the entire data set and not just training or test data? If you are able to post your code and some data to reproduce, that would help in troubleshooting.
On Tue, Jun 28, 2016 at 4:40 PM, Rich Tarro <richta...@gmail.com> wrote: > Thanks for the response, but in my case I reversed the meaning of > "prediction" and "predictedLabel". It seemed to make more sense to me that > way, but in retrospect, it probably only causes confusion to anyone else > looking at this. I reran the code with all the pipeline stage inputs and > outputs named exactly as in the Random Forest Classifier example to make > sure I hadn't messed anything up when I renamed things. Same error. > > I'm still at the point where I can train the model and make predictions, > but not able to get the MulticlassClassificationEvaluator to work on the > DataFrame of predictions. > > Any other suggestions? Thanks. > > > > On Tue, Jun 28, 2016 at 4:21 PM, Rich Tarro <richta...@gmail.com> wrote: > >> I created a ML pipeline using the Random Forest Classifier - similar to >> what is described here except in my case the source data is in csv format >> rather than libsvm. >> >> >> https://spark.apache.org/docs/latest/ml-classification-regression.html#random-forest-classifier >> >> I am able to successfully train the model and make predictions (on test >> data not used to train the model) as shown here. >> >> +------------+--------------+-----+----------+--------------------+ >> |indexedLabel|predictedLabel|label|prediction| features| >> +------------+--------------+-----+----------+--------------------+ >> | 4.0| 4.0| 0| 0|(784,[124,125,126...| >> | 2.0| 2.0| 3| 3|(784,[119,120,121...| >> | 8.0| 8.0| 8| 8|(784,[180,181,182...| >> | 0.0| 0.0| 1| 1|(784,[154,155,156...| >> | 3.0| 8.0| 2| 8|(784,[148,149,150...| >> +------------+--------------+-----+----------+--------------------+ >> only showing top 5 rows >> >> However, when I attempt to calculate the error between the indexedLabel and >> the precictedLabel using the MulticlassClassificationEvaluator, I get the >> NoSuchElementException error attached below. >> >> val evaluator = new >> MulticlassClassificationEvaluator().setLabelCol("indexedLabel").setPredictionCol("predictedLabel").setMetricName("precision") >> val accuracy = evaluator.evaluate(predictions) >> println("Test Error = " + (1.0 - accuracy)) >> >> What could be the issue? >> >> >> >> Name: org.apache.spark.SparkException >> Message: Job aborted due to stage failure: Task 2 in stage 49.0 failed 10 >> times, most recent failure: Lost task 2.9 in stage 49.0 (TID 162, >> yp-spark-dal09-env5-0024): java.util.NoSuchElementException: key not found: >> 132.0 >> at scala.collection.MapLike$class.default(MapLike.scala:228) >> at scala.collection.AbstractMap.default(Map.scala:58) >> at scala.collection.MapLike$class.apply(MapLike.scala:141) >> at scala.collection.AbstractMap.apply(Map.scala:58) >> at >> org.apache.spark.ml.feature.VectorIndexerModel$$anonfun$10.apply(VectorIndexer.scala:331) >> at >> org.apache.spark.ml.feature.VectorIndexerModel$$anonfun$10.apply(VectorIndexer.scala:309) >> at >> org.apache.spark.ml.feature.VectorIndexerModel$$anonfun$11.apply(VectorIndexer.scala:351) >> at >> org.apache.spark.ml.feature.VectorIndexerModel$$anonfun$11.apply(VectorIndexer.scala:351) >> at >> org.apache.spark.sql.catalyst.expressions.GeneratedClass$SpecificPredicate.eval(Unknown >> Source) >> at >> org.apache.spark.sql.catalyst.expressions.codegen.GeneratePredicate$$anonfun$create$2.apply(GeneratePredicate.scala:67) >> at >> org.apache.spark.sql.catalyst.expressions.codegen.GeneratePredicate$$anonfun$create$2.apply(GeneratePredicate.scala:67) >> at >> org.apache.spark.sql.execution.Filter$$anonfun$2$$anonfun$apply$2.apply(basicOperators.scala:74) >> at >> org.apache.spark.sql.execution.Filter$$anonfun$2$$anonfun$apply$2.apply(basicOperators.scala:72) >> at scala.collection.Iterator$$anon$14.hasNext(Iterator.scala:390) >> at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:327) >> at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:327) >> at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:327) >> at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:327) >> at >> org.apache.spark.util.collection.ExternalSorter.insertAll(ExternalSorter.scala:189) >> at >> org.apache.spark.shuffle.sort.SortShuffleWriter.write(SortShuffleWriter.scala:64) >> at >> org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:73) >> at >> org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:41) >> at org.apache.spark.scheduler.Task.run(Task.scala:89) >> at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:213) >> at >> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1153) >> at >> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) >> at java.lang.Thread.run(Thread.java:785) >> >> Driver stacktrace: >> StackTrace: >> org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1431) >> org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1419) >> org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1418) >> scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59) >> scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47) >> org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1418) >> org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:799) >> org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:799) >> scala.Option.foreach(Option.scala:236) >> org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:799) >> org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:1640) >> org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1599) >> org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1588) >> org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:48) >> java.lang.Thread.getStackTrace(Thread.java:1117) >> org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:620) >> org.apache.spark.SparkContext.runJob(SparkContext.scala:1837) >> org.apache.spark.SparkContext.runJob(SparkContext.scala:1850) >> org.apache.spark.SparkContext.runJob(SparkContext.scala:1863) >> org.apache.spark.SparkContext.runJob(SparkContext.scala:1934) >> org.apache.spark.rdd.RDD$$anonfun$collect$1.apply(RDD.scala:927) >> org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150) >> org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:111) >> org.apache.spark.rdd.RDD.withScope(RDD.scala:316) >> org.apache.spark.rdd.RDD.collect(RDD.scala:926) >> org.apache.spark.rdd.PairRDDFunctions$$anonfun$collectAsMap$1.apply(PairRDDFunctions.scala:741) >> org.apache.spark.rdd.PairRDDFunctions$$anonfun$collectAsMap$1.apply(PairRDDFunctions.scala:740) >> org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150) >> org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:111) >> org.apache.spark.rdd.RDD.withScope(RDD.scala:316) >> org.apache.spark.rdd.PairRDDFunctions.collectAsMap(PairRDDFunctions.scala:740) >> org.apache.spark.mllib.evaluation.MulticlassMetrics.tpByClass$lzycompute(MulticlassMetrics.scala:49) >> org.apache.spark.mllib.evaluation.MulticlassMetrics.tpByClass(MulticlassMetrics.scala:45) >> org.apache.spark.mllib.evaluation.MulticlassMetrics.precision$lzycompute(MulticlassMetrics.scala:142) >> org.apache.spark.mllib.evaluation.MulticlassMetrics.precision(MulticlassMetrics.scala:142) >> org.apache.spark.ml.evaluation.MulticlassClassificationEvaluator.evaluate(MulticlassClassificationEvaluator.scala:84) >> $line110.$read$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:59) >> $line110.$read$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:64) >> $line110.$read$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:66) >> $line110.$read$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:68) >> $line110.$read$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:70) >> $line110.$read$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:72) >> $line110.$read$$iwC$$iwC$$iwC$$iwC.<init>(<console>:74) >> $line110.$read$$iwC$$iwC$$iwC.<init>(<console>:76) >> $line110.$read$$iwC$$iwC.<init>(<console>:78) >> $line110.$read$$iwC.<init>(<console>:80) >> $line110.$read.<init>(<console>:82) >> $line110.$read$.<init>(<console>:86) >> $line110.$read$.<clinit>(<console>) >> $line110.$eval$.<init>(<console>:7) >> $line110.$eval$.<clinit>(<console>) >> $line110.$eval.$print(<console>) >> sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) >> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:95) >> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:55) >> java.lang.reflect.Method.invoke(Method.java:507) >> org.apache.spark.repl.SparkIMain$ReadEvalPrint.call(SparkIMain.scala:1065) >> org.apache.spark.repl.SparkIMain$Request.loadAndRun(SparkIMain.scala:1346) >> org.apache.spark.repl.SparkIMain.loadAndRunReq$1(SparkIMain.scala:840) >> org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:871) >> org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:819) >> com.ibm.spark.interpreter.ScalaInterpreter$$anonfun$interpretAddTask$1$$anonfun$apply$3.apply(ScalaInterpreter.scala:296) >> com.ibm.spark.interpreter.ScalaInterpreter$$anonfun$interpretAddTask$1$$anonfun$apply$3.apply(ScalaInterpreter.scala:291) >> com.ibm.spark.global.StreamState$.withStreams(StreamState.scala:80) >> com.ibm.spark.interpreter.ScalaInterpreter$$anonfun$interpretAddTask$1.apply(ScalaInterpreter.scala:290) >> com.ibm.spark.interpreter.ScalaInterpreter$$anonfun$interpretAddTask$1.apply(ScalaInterpreter.scala:290) >> com.ibm.spark.utils.TaskManager$$anonfun$add$2$$anon$1.run(TaskManager.scala:123) >> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1153) >> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) >> java.lang.Thread.run(Thread.java:785) >> >> >> >> >> >> >
