Hi,

I am working through the process of submitting a new package (MMAPPR2). We are 
having a problem with the build failing, because our package requires Samtools 
installed. We cannot use Rsamtools, as we depend on features not implemented in 
the package. How do we resolve the issue? What is the policy for system 
dependencies? We have samtools listed in the DESCRIPTION and installation 
instructions in our README, but I am sure that is not enough to get it 
installed on the Build and Check servers.

Thanks,

Jonathon Hill

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