Hi, I think it should also work with the cartoon side chain helper option which adjust the cartoon slightly to prevent such situations.
Christian Am Mittwoch 26 Oktober 2011 16:15:55 schrieb Ke, Jiyuan: > Dear All, > > I have a question regarding making disulfide bonds in Pymol. The overall > structure is in cartoon representation. When I display the disulfide bond > residues as stick models, the cysteine residues sitting on the beta strand > have a gap from the actual beta-strand. If I check off the flat sheet > option, all the beta-strands look very wavy, but the cysteines are > actually on the beta strands. I want to just change the two beta-strands > with cysteine residues on it as wavy strands and keep other beta-strands > flat looking. Does anyone know a way to do this or has better ways to draw > individual residues on beta-strands. Thanks! jiyuan > > > Jiyuan Ke, Ph.D. > Research Scientist > Van Andel Research Institute > 333 Bostwick Ave NE > Grand Rapids, MI 49503 > > > The information transmitted is intended only for the person or entity to > which it is addressed and may contain confidential and/or privileged > material. Any review, retransmission, dissemination or other use of, or > taking of any action in reliance upon, this information by persons or > entities other than the intended recipient is prohibited. If you received > this in error, please contact the sender and delete the material from any > computer. >
