commit: ae0f5a7eac0d9d02c7d62737477f07a1c61e94f1 Author: Michael Schubert <mschu.dev <AT> gmail <DOT> com> AuthorDate: Sun Jan 26 14:23:56 2025 +0000 Commit: Nowa Ammerlaan <nowa <AT> gentoo <DOT> org> CommitDate: Thu Feb 6 13:54:32 2025 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=ae0f5a7e
sci-biology/deeptools: drop outdated ebuilds Signed-off-by: Michael Schubert <mschu.dev <AT> gmail.com> Closes: https://github.com/gentoo/sci/pull/1317 Signed-off-by: Nowa Ammerlaan <nowa <AT> gentoo.org> sci-biology/deeptools/deeptools-3.5.0.ebuild | 37 ---------------------------- sci-biology/deeptools/deeptools-3.5.1.ebuild | 37 ---------------------------- 2 files changed, 74 deletions(-) diff --git a/sci-biology/deeptools/deeptools-3.5.0.ebuild b/sci-biology/deeptools/deeptools-3.5.0.ebuild deleted file mode 100644 index 7c2eaa739..000000000 --- a/sci-biology/deeptools/deeptools-3.5.0.ebuild +++ /dev/null @@ -1,37 +0,0 @@ -# Copyright 1999-2023 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -DISTUTILS_USE_PEP517=setuptools -PYTHON_COMPAT=( python3_{10..11} ) - -inherit distutils-r1 - -DESCRIPTION="Extract reads from BAM files, normalize, draw figures, convert BAM to bigWig" -HOMEPAGE="https://github.com/deeptools/deepTools"; -SRC_URI="https://github.com/deeptools/deepTools/archive/${PV}.tar.gz -> ${P}.tar.gz" - -LICENSE="BSD" -SLOT="0" -KEYWORDS="~amd64" - -# TODO: fix this -RESTRICT="test" - -RDEPEND=" - >=sci-biology/deeptools-intervals-0.1.8[${PYTHON_USEDEP}] - >=dev-python/numpy-1.9.0[${PYTHON_USEDEP}] - >=dev-python/numpydoc-0.5[${PYTHON_USEDEP}] - >=dev-python/scipy-0.17.0[${PYTHON_USEDEP}] - dev-python/plotly[${PYTHON_USEDEP}] - >=dev-python/py2bit-0.2.0[${PYTHON_USEDEP}] - >=dev-python/pyBigWig-0.2.1[${PYTHON_USEDEP}] - >=sci-biology/pysam-0.14.0[${PYTHON_USEDEP}] - >=dev-python/matplotlib-3.1.0[${PYTHON_USEDEP}] -" - -S="${WORKDIR}/deepTools-${PV}" - -distutils_enable_sphinx docs dev-python/sphinx-rtd-theme dev-python/sphinx-argparse -#distutils_enable_tests nose diff --git a/sci-biology/deeptools/deeptools-3.5.1.ebuild b/sci-biology/deeptools/deeptools-3.5.1.ebuild deleted file mode 100644 index 7c2eaa739..000000000 --- a/sci-biology/deeptools/deeptools-3.5.1.ebuild +++ /dev/null @@ -1,37 +0,0 @@ -# Copyright 1999-2023 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -DISTUTILS_USE_PEP517=setuptools -PYTHON_COMPAT=( python3_{10..11} ) - -inherit distutils-r1 - -DESCRIPTION="Extract reads from BAM files, normalize, draw figures, convert BAM to bigWig" -HOMEPAGE="https://github.com/deeptools/deepTools"; -SRC_URI="https://github.com/deeptools/deepTools/archive/${PV}.tar.gz -> ${P}.tar.gz" - -LICENSE="BSD" -SLOT="0" -KEYWORDS="~amd64" - -# TODO: fix this -RESTRICT="test" - -RDEPEND=" - >=sci-biology/deeptools-intervals-0.1.8[${PYTHON_USEDEP}] - >=dev-python/numpy-1.9.0[${PYTHON_USEDEP}] - >=dev-python/numpydoc-0.5[${PYTHON_USEDEP}] - >=dev-python/scipy-0.17.0[${PYTHON_USEDEP}] - dev-python/plotly[${PYTHON_USEDEP}] - >=dev-python/py2bit-0.2.0[${PYTHON_USEDEP}] - >=dev-python/pyBigWig-0.2.1[${PYTHON_USEDEP}] - >=sci-biology/pysam-0.14.0[${PYTHON_USEDEP}] - >=dev-python/matplotlib-3.1.0[${PYTHON_USEDEP}] -" - -S="${WORKDIR}/deepTools-${PV}" - -distutils_enable_sphinx docs dev-python/sphinx-rtd-theme dev-python/sphinx-argparse -#distutils_enable_tests nose
