Hi Nitu, >> When replying, please edit your Subject line so it is more specific >> than "Re: Contents of gmx-users digest..."
Please!... And don't include the whole digest. > > Dear Mark > Thanks for your reply. as u ask- how many atoms is------Protein A- 5244 > > protein B- 4658 > And in one dmpc molecule there is 46 atoms so in 128 it is 5888 > atoms >> >> can u suggest me how it is helpful in making correct topology file. > > As you wrote in your mail you should make two # ifdef POSRES section does it > means separatly before addind .itp file of Protein A and Protein B???????? You should aim for appropriate #ifdef POSRES sections in each Protein_?.itp file. Cheers, Tsjerk -- Tsjerk A. Wassenaar, Ph.D. Junior UD (post-doc) Biomolecular NMR, Bijvoet Center Utrecht University Padualaan 8 3584 CH Utrecht The Netherlands P: +31-30-2539931 F: +31-30-2537623 _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
