Hello, I am staining paraffin sections (10 microns) with Alcian blue and Nuclear Fast Red as standard protocol as below. The problem is that I see some sections stained with alicain blue show some variability (hope i am able to attach image); alcian blue stain are washed out in some sections even in the same slide. Those sections show pink color in the cartilage.
Clearing dehydrate 1% Alcain blue (PH2.5) 30 mins dip in tap water running water 2mins dip deionized water 0.1% Nuclear Fast red 5 mins dip deionized water 30 sec X 2 95% ethanol 1min 100% ethanol 1 mins X 2 clearing Is this something to do with filtering alcian blue or nuclear fast red? I filtered alcian blue using needles to eliminate a big undisolved particle, but I did not filter the nuclear fast red since it seems all dissolved well. also I rarely had the problem last time i used the same staining. I know i need to filter with filter paper but when i tried, even with non-fine filter paper, it absorbed too much dye and was not successful. I tried to wash nuclear fast red with running tap water 1 min and dip in deionized water intead of twice wash of deionized water as described above. However, variable staining of alcian blue still present. Does anybody have same problem before? I appreciate any suggestion to solve this. Thanks. Rui
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