That is the problem Berend is asking about. Toby and I have to fix it. Matt
On Wed, Dec 20, 2023 at 7:49 AM Mark Adams <mfad...@lbl.gov> wrote: > I seem to have a regression with writing HDF5 meshes with DMForest. > > I going to try bisect but wanted to see if anyone has any ideas, > > Thanks, > Mark > > [0]PETSC ERROR: --------------------- Error Message > -------------------------------------------------------------- > [0]PETSC ERROR: Invalid argument > [0]PETSC ERROR: Unknown discretization type for field 0 > [0]PETSC ERROR: WARNING! There are unused option(s) set! Could be the > program crashed before usage or a spelling mistake, etc! > [0]PETSC ERROR: Option left: name:-ex30_vec_view value: > hdf5:sol_e.h5::append source: command line > [0]PETSC ERROR: Option left: name:-options_left (no value) source: > command line > [0]PETSC ERROR: Option left: name:-snes_converged_reason (no value) > source: command line > [0]PETSC ERROR: See https://petsc.org/release/faq/ for trouble shooting. > [0]PETSC ERROR: Petsc Development GIT revision: v3.20.2-363-g9617a9bff32 > GIT Date: 2023-12-19 16:12:36 +0000 > [0]PETSC ERROR: ./ex30 on a arch-macosx-gnu-O named MarksMac-302.local by > markadams Wed Dec 20 07:39:06 2023 > [0]PETSC ERROR: Configure options CFLAGS="-g -Wno-deprecated-declarations > " CXXFLAGS="-g -Wno-deprecated-declarations " COPTFLAGS=-O CXXOPTFLAGS=-O > --with-cc=/usr/local/opt/llvm/bin/clang > --with-cxx=/usr/local/opt/llvm/bin/clang++ --download-mpich > --with-64-bit-indices=1 --download-parmetis=1 --download-metis=1 > --download-zoltan=1 --download-hypre=1 --download-triangle=1 > --download-kokkos=1 --download-kokkos-kernels=1 --download-p4est=1 > --with-zlib-dir=/usr/local/opt/zlib --with-debugging=0 --download-hdf5=1 > PETSC_DIR=/Users/markadams/Codes/petsc2 PETSC_ARCH=arch-macosx-gnu-O > [0]PETSC ERROR: #1 DMCreateLocalSection_Plex() at > /Users/markadams/Codes/petsc2/src/dm/impls/plex/plexsection.c:476 > [0]PETSC ERROR: #2 DMGetLocalSection() at > /Users/markadams/Codes/petsc2/src/dm/interface/dm.c:4293 > [0]PETSC ERROR: #3 DMCreateDefaultConstraints_Plex() at > /Users/markadams/Codes/petsc2/src/dm/impls/plex/plex.c:10263 > [0]PETSC ERROR: #4 DMGetDefaultConstraints() at > /Users/markadams/Codes/petsc2/src/dm/interface/dm.c:4389 > [0]PETSC ERROR: #5 DMPlexComputeAnchorMatrix_Tree_FromReference() at > /Users/markadams/Codes/petsc2/src/dm/impls/plex/plextree.c:1561 > [0]PETSC ERROR: #6 DMCreateDefaultConstraints_Plex() at > /Users/markadams/Codes/petsc2/src/dm/impls/plex/plex.c:10267 > [0]PETSC ERROR: #7 DMGetDefaultConstraints() at > /Users/markadams/Codes/petsc2/src/dm/interface/dm.c:4389 > [0]PETSC ERROR: #8 DMLocalToGlobalHook_Constraints() at > /Users/markadams/Codes/petsc2/src/dm/interface/dm.c:2941 > [0]PETSC ERROR: #9 DMLocalToGlobalBegin() at > /Users/markadams/Codes/petsc2/src/dm/interface/dm.c:3042 > [0]PETSC ERROR: #10 DMGetCoordinates() at > /Users/markadams/Codes/petsc2/src/dm/interface/dmcoordinates.c:429 > [0]PETSC ERROR: #11 DMPlexCoordinatesView_HDF5_Legacy_Private() at > /Users/markadams/Codes/petsc2/src/dm/impls/plex/plexhdf5.c:1007 > [0]PETSC ERROR: #12 DMPlexCoordinatesView_HDF5_Internal() at > /Users/markadams/Codes/petsc2/src/dm/impls/plex/plexhdf5.c:1044 > [0]PETSC ERROR: #13 DMPlexView_HDF5_Internal() at > /Users/markadams/Codes/petsc2/src/dm/impls/plex/plexhdf5.c:1300 > [0]PETSC ERROR: #14 DMView_Plex() at > /Users/markadams/Codes/petsc2/src/dm/impls/plex/plex.c:1924 > [0]PETSC ERROR: #15 DMView() at > /Users/markadams/Codes/petsc2/src/dm/interface/dm.c:989 > [0]PETSC ERROR: #16 PetscObjectView() at > /Users/markadams/Codes/petsc2/src/sys/objects/destroy.c:78 > [0]PETSC ERROR: #17 PetscObjectViewFromOptions() at > /Users/markadams/Codes/petsc2/src/sys/objects/destroy.c:130 > [0]PETSC ERROR: #18 DMViewFromOptions() at > /Users/markadams/Codes/petsc2/src/dm/interface/dm.c:933 > [0]PETSC ERROR: #19 go() at ex30.c:238 > [0]PETSC ERROR: #20 main() at ex30.c:494 > [0]PETSC ERROR: PETSc Option Table entries: > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener https://www.cse.buffalo.edu/~knepley/ <http://www.cse.buffalo.edu/~knepley/>