Its not done yet. Matt
On Wed, Dec 20, 2023 at 8:52 AM Mark Adams <mfad...@lbl.gov> wrote: > Cool, it's not in main is it? > > On Wed, Dec 20, 2023 at 8:51 AM Matthew Knepley <knep...@gmail.com> wrote: > >> That is the problem Berend is asking about. Toby and I have to fix it. >> >> Matt >> >> On Wed, Dec 20, 2023 at 7:49 AM Mark Adams <mfad...@lbl.gov> wrote: >> >>> I seem to have a regression with writing HDF5 meshes with DMForest. >>> >>> I going to try bisect but wanted to see if anyone has any ideas, >>> >>> Thanks, >>> Mark >>> >>> [0]PETSC ERROR: --------------------- Error Message >>> -------------------------------------------------------------- >>> [0]PETSC ERROR: Invalid argument >>> [0]PETSC ERROR: Unknown discretization type for field 0 >>> [0]PETSC ERROR: WARNING! There are unused option(s) set! Could be the >>> program crashed before usage or a spelling mistake, etc! >>> [0]PETSC ERROR: Option left: name:-ex30_vec_view value: >>> hdf5:sol_e.h5::append source: command line >>> [0]PETSC ERROR: Option left: name:-options_left (no value) source: >>> command line >>> [0]PETSC ERROR: Option left: name:-snes_converged_reason (no value) >>> source: command line >>> [0]PETSC ERROR: See https://petsc.org/release/faq/ for trouble shooting. >>> [0]PETSC ERROR: Petsc Development GIT revision: v3.20.2-363-g9617a9bff32 >>> GIT Date: 2023-12-19 16:12:36 +0000 >>> [0]PETSC ERROR: ./ex30 on a arch-macosx-gnu-O named MarksMac-302.local >>> by markadams Wed Dec 20 07:39:06 2023 >>> [0]PETSC ERROR: Configure options CFLAGS="-g >>> -Wno-deprecated-declarations " CXXFLAGS="-g -Wno-deprecated-declarations " >>> COPTFLAGS=-O CXXOPTFLAGS=-O --with-cc=/usr/local/opt/llvm/bin/clang >>> --with-cxx=/usr/local/opt/llvm/bin/clang++ --download-mpich >>> --with-64-bit-indices=1 --download-parmetis=1 --download-metis=1 >>> --download-zoltan=1 --download-hypre=1 --download-triangle=1 >>> --download-kokkos=1 --download-kokkos-kernels=1 --download-p4est=1 >>> --with-zlib-dir=/usr/local/opt/zlib --with-debugging=0 --download-hdf5=1 >>> PETSC_DIR=/Users/markadams/Codes/petsc2 PETSC_ARCH=arch-macosx-gnu-O >>> [0]PETSC ERROR: #1 DMCreateLocalSection_Plex() at >>> /Users/markadams/Codes/petsc2/src/dm/impls/plex/plexsection.c:476 >>> [0]PETSC ERROR: #2 DMGetLocalSection() at >>> /Users/markadams/Codes/petsc2/src/dm/interface/dm.c:4293 >>> [0]PETSC ERROR: #3 DMCreateDefaultConstraints_Plex() at >>> /Users/markadams/Codes/petsc2/src/dm/impls/plex/plex.c:10263 >>> [0]PETSC ERROR: #4 DMGetDefaultConstraints() at >>> /Users/markadams/Codes/petsc2/src/dm/interface/dm.c:4389 >>> [0]PETSC ERROR: #5 DMPlexComputeAnchorMatrix_Tree_FromReference() at >>> /Users/markadams/Codes/petsc2/src/dm/impls/plex/plextree.c:1561 >>> [0]PETSC ERROR: #6 DMCreateDefaultConstraints_Plex() at >>> /Users/markadams/Codes/petsc2/src/dm/impls/plex/plex.c:10267 >>> [0]PETSC ERROR: #7 DMGetDefaultConstraints() at >>> /Users/markadams/Codes/petsc2/src/dm/interface/dm.c:4389 >>> [0]PETSC ERROR: #8 DMLocalToGlobalHook_Constraints() at >>> /Users/markadams/Codes/petsc2/src/dm/interface/dm.c:2941 >>> [0]PETSC ERROR: #9 DMLocalToGlobalBegin() at >>> /Users/markadams/Codes/petsc2/src/dm/interface/dm.c:3042 >>> [0]PETSC ERROR: #10 DMGetCoordinates() at >>> /Users/markadams/Codes/petsc2/src/dm/interface/dmcoordinates.c:429 >>> [0]PETSC ERROR: #11 DMPlexCoordinatesView_HDF5_Legacy_Private() at >>> /Users/markadams/Codes/petsc2/src/dm/impls/plex/plexhdf5.c:1007 >>> [0]PETSC ERROR: #12 DMPlexCoordinatesView_HDF5_Internal() at >>> /Users/markadams/Codes/petsc2/src/dm/impls/plex/plexhdf5.c:1044 >>> [0]PETSC ERROR: #13 DMPlexView_HDF5_Internal() at >>> /Users/markadams/Codes/petsc2/src/dm/impls/plex/plexhdf5.c:1300 >>> [0]PETSC ERROR: #14 DMView_Plex() at >>> /Users/markadams/Codes/petsc2/src/dm/impls/plex/plex.c:1924 >>> [0]PETSC ERROR: #15 DMView() at >>> /Users/markadams/Codes/petsc2/src/dm/interface/dm.c:989 >>> [0]PETSC ERROR: #16 PetscObjectView() at >>> /Users/markadams/Codes/petsc2/src/sys/objects/destroy.c:78 >>> [0]PETSC ERROR: #17 PetscObjectViewFromOptions() at >>> /Users/markadams/Codes/petsc2/src/sys/objects/destroy.c:130 >>> [0]PETSC ERROR: #18 DMViewFromOptions() at >>> /Users/markadams/Codes/petsc2/src/dm/interface/dm.c:933 >>> [0]PETSC ERROR: #19 go() at ex30.c:238 >>> [0]PETSC ERROR: #20 main() at ex30.c:494 >>> [0]PETSC ERROR: PETSc Option Table entries: >>> >> >> >> -- >> What most experimenters take for granted before they begin their >> experiments is infinitely more interesting than any results to which their >> experiments lead. >> -- Norbert Wiener >> >> https://www.cse.buffalo.edu/~knepley/ >> <http://www.cse.buffalo.edu/~knepley/> >> > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener https://www.cse.buffalo.edu/~knepley/ <http://www.cse.buffalo.edu/~knepley/>