hi all,
(from the minutes)
"Yolanda/Kei/Scott: semantic annotation/description of workflow would enable
the retrieval of data relevant to that workflow (i.e. data that could be
used to populate that workflow for a different experimental scenario)"
what is typically in a MAGE-TAB/MAGE-ML document are the protocols for how
the source was processed into the extract then how the hybridization,
feature extraction, error and normalization were performed. these are
interesting and different protocols can cause differences at this level but
it is pretty much a known art and usually not of too much interest or
variability.
what is usually missing from those documents, along with the final gene
list, is how that gene list was obtained, what higher level analysis was
used, that is generally only in the paper unfortunately.
cheers,
michael
.
----- Original Message -----
From: "Kei Cheung" <kei.che...@yale.edu>
To: "HCLS" <public-semweb-lifesci@w3.org>
Sent: Monday, November 23, 2009 1:27 PM
Subject: Re: BioRDF Telcon
Today's BioRDF minutes are available at the following:
http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2009/11-23_Conference_Call
Thanks to Rob for scribing.
Cheers,
-Kei
Kei Cheung wrote:
This is a reminder that the next BioRDF telcon call will be held at 11 am
EDT (5 pm CET) on Monday, November 23 (see details below).
Cheers,
-Kei
== Conference Details ==
* Date of Call: Monday November 23, 2009
* Time of Call: 11:00 am Eastern Time
* Dial-In #: +1.617.761.6200 (Cambridge, MA)
* Dial-In #: +33.4.89.06.34.99 (Nice, France)
* Dial-In #: +44.117.370.6152 (Bristol, UK)
* Participant Access Code: 4257 ("HCLS")
* IRC Channel: irc.w3.org port 6665 channel #HCLS (see W3C IRC page for
details, or see Web IRC), Quick Start: Use
http://www.mibbit.com/chat/?server=irc.w3.org:6665&channel=%23hcls for
IRC access.
* Duration: ~1 hour
* Frequency: bi-weekly
* Convener: Kei Cheung
* Scribe: to-be-determined
== Agenda ==
* Roll call & introduction (Kei)
* RDF representation of microarray experiment and data (All)
* Provenance and workflow (All)
