Hi Michael et al,
As discussed during the last BioRDF, we also thought that entrez gene is
a good start as it has cross-links to many other sources including gene
expression data sources.
Cheers,
-Kei
mdmiller wrote:
hi all,
looks like you're making progress on the gene expression use case,
just one quick comment is that in my experience entrez gene
identifiers/accessions are the best to use. what i've seen is that
they provide very good linkage to all the other sequence databases.
cheers,
michael
----- Original Message ----- From: "Kei Cheung" <kei.che...@yale.edu>
To: "HCLS" <public-semweb-lifesci@w3.org>
Sent: Monday, December 21, 2009 12:35 PM
Subject: Re: BioRDF Telcon
The minutes for today's BioRDF call are available at the following:
http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2009/12-21_Conference_Call
As we discussed during the call, I updated both the microarray use
case wiki page [1] and the provenance wiki page [2] with several
example queries to move forward.
Thanks to Scott for scribing.
Wish you all Happy Holidays!
Cheers,
-Kei
[1] http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/QueryFederation2
[2]
http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/MicroarrayExperimentContext
Kei Cheung wrote:
This is a reminder that the next BioRDF telcon call will be held at
11 am EDT (5 pm CET) on Monday, December 21 (see details below).
Cheers,
-Kei
== Conference Details ==
* Date of Call: Monday December 21, 2009
* Time of Call: 11:00 am Eastern Time
* Dial-In #: +1.617.761.6200 (Cambridge, MA)
* Dial-In #: +33.4.89.06.34.99 (Nice, France)
* Dial-In #: +44.117.370.6152 (Bristol, UK)
* Participant Access Code: 4257 ("HCLS")
* IRC Channel: irc.w3.org port 6665 channel #HCLS (see W3C IRC page
for details, or see Web IRC), Quick Start: Use
http://www.mibbit.com/chat/?server=irc.w3.org:6665&channel=%23hcls
for IRC access.
* Duration: ~1 hour
* Frequency: bi-weekly
* Convener: Kei Cheung
* Scribe: to-be-determined
==Agenda==
* Introduction: Kei
* HCLS KB update (Matthias, Adrian)
* Microarray use case (All)
* Possible application(s)/demo(s) (All)