I have downloaded a file that I don't know how to describe correctly.
It contains R code and Latex, and I should be able to reproduce an
analysis by running an R script in this folder.
There is a line in the R script:
junk <- system(paste("/usr/texbin/pdflatex ",latexFiles[i1]),
intern=TRUE)
that needs to be modified to run on my computer. I use WinEdt with
Miktek 2.6 Does anyone have any suggestions on how I can modify the
statement above to work on my computer. Or any other suggestions to
get it working.
On my computer I see that pdflatex.exe is in:
C:\Program Files\MiKTeX 2.6\miktex\bin
So I made the following modification.
junk <- system(paste("C:\\Program Files\\MiKTeX
2.6\\miktex\\bin\\pdflatex ",latexFiles[i1]),
intern=TRUE)
Maybe spaces are causing problems? Here is the error:
> source("D:\\My Documents\\Coombes2\\Scripts\\runAll2.R")
Writing to file buildRda.cellLinesFromPredictors.tex
Processing code chunks ...
1 : echo term verbatim (label=options)
2 : echo term verbatim (label=invokeMatchPredictors)
3 : echo term verbatim (label=getLocation)
4 : echo term verbatim (label=saveStuff)
5 : echo term verbatim (label=sessionInfo)
You can now run LaTeX on 'buildRda.cellLinesFromPredictors.tex'
Error in system(paste("C:\\Program Files\\MiKTeX
2.6\\miktex\\bin\\pdflatex", :
C:\Program not found
Thanks for any help.
> sessionInfo()
R version 2.11.1 (2010-05-31)
i386-pc-mingw32
locale:
[1] LC_COLLATE=English_United States.1252
[2] LC_CTYPE=English_United States.1252
[3] LC_MONETARY=English_United States.1252
[4] LC_NUMERIC=C
[5] LC_TIME=English_United States.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
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