On 4 November 2010 at 10:16, Michael Rutter wrote: | On 11/04/2010 10:03 AM, ottorino wrote: | > Il giorno gio, 27/05/2010 alle 10.23 +0100, Scott Brogan ha scritto: | >> I've not been able to install rjags successfully in Ubuntu 10.04 : | >> ...... | > | > Dear members of the list, | > I'm trying to re-install the couple JAGS/rjags on my system. | > | >> Ubuntu 10.04 (on amd64) | >> GNU Emacs 23.1.50.1 (x86_64-pc-linux-gnu, GTK+ Version2.18.0) | >> ESS version 5.11 | >> R 2.12.0 | | >> Snip | | > ....... | > configure: error: "Cannot load JAGS library in /usr/local/lib" | > ERROR: configuration failed for package ‘rjags’ | > * removing ‘/usr/local/lib/R/site-library/rjags’ | > | > I get the same error on | > | > install.packages("rjags", configure.args=" | > --with-jags-lib=/usr/local/lib/JAGS | > --with-jags-modules=/usr/local/lib/JAGS/modules") | > | > and on | > | > install.packages("rjags", configure.args=" | > --with-jags-lib=/usr/local/lib64/JAGS | > --with-jags-modules=/usr/local/lib64/JAGS/modules") | > | > I've googled around and tried the directions written here | > | > http://yusung.blogspot.com/2009/01/install-jags-and-rjags-in-fedora.html | > | > and here | > | > http://quote.ucsd.edu/blogs/rogblog/2008/11/09/installing-rjags-on-64-bit-debian-etch/ | > | > but without success. | > | > Any hint ? | > | > | | I would first make sure you have the latest version of JAGS from Martyn | Plummer's website (http://www-fis.iarc.fr/~martyn/software/jags/). | Install that as per the directions. Then, from a command line, run:
What is wrong with my Debian package, suitably rebuilt by Ubuntu? e...@max:~$ apt-cache policy jags jags: Installed: (none) Candidate: 2.1.0-2 Version table: 2.1.0-2 0 500 http://us.archive.ubuntu.com/ubuntu/ maverick/universe amd64 Packages e...@max:~$ Provided you are current (ie Ubuntu 10.10), everything should be good. Older releases are indeed stuck at the 1.* flavour of jags. Maybe if we ask nicely Michael and Vincent will 'adopt' jags too for their excellent 'backporting' (or 'crossbuilding' ?) effort. (We do need a slogan for that.) Dirk | | sudo ldconfig | | That is what fixed the problem for me in the past. Then you should be | able to install rjags from within R. | | Hope this helps, | Michael | | | -- | Dr. Michael A. Rutter | School of Science | Penn State Erie, The Behrend College | Station Road | Erie, PA 16563 | http://math.bd.psu.edu/faculty/rutter | | _______________________________________________ | R-SIG-Debian mailing list | R-SIG-Debian@r-project.org | https://stat.ethz.ch/mailman/listinfo/r-sig-debian -- Dirk Eddelbuettel | e...@debian.org | http://dirk.eddelbuettel.com _______________________________________________ R-SIG-Debian mailing list R-SIG-Debian@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-debian