> library(rgdal) Le chargement a nécessité le package : sp rgdal: version: 1.5-19, (SVN revision 1092) Geospatial Data Abstraction Library extensions to R successfully loaded Loaded GDAL runtime: GDAL 3.0.4, released 2020/01/28 Path to GDAL shared files: /usr/share/gdal GDAL binary built with GEOS: TRUE Loaded PROJ runtime: Rel. 6.3.1, February 10th, 2020, [PJ_VERSION: 631] Path to PROJ shared files: /usr/share/proj Linking to sp version:1.4-4 To mute warnings of possible GDAL/OSR exportToProj4() degradation, use options("rgdal_show_exportToProj4_warnings"="none") before loading rgdal.
---------------- I have uninstall and reinstall proj, sf and rgdal But it is still not possible to pick up the latest version of PROJ... should be 7.2 instead of 6.3 Thanks -----Message d'origine----- De : Nicolas Saby Envoyé : mardi 19 janvier 2021 11:25 À : 'roger.biv...@nhh.no' <roger.biv...@nhh.no> Cc : r-sig-geo@r-project.org Objet : RE: [R-sig-Geo] gdal error Yes, thanks it clarifies. I need now to find how to uninstall the older version of proj-bin I have already tried sudo apt remove package_name but it did not fixed the pb Many thanks -----Message d'origine----- De : Roger Bivand <roger.biv...@nhh.no> Envoyé : mardi 19 janvier 2021 10:17 À : Nicolas Saby <nicolas.s...@inrae.fr> Cc : r-sig-geo@r-project.org Objet : Re: [R-sig-Geo] gdal error On Tue, 19 Jan 2021, Nicolas Saby wrote: > Dear all, > > I recently updated my linux system. I am running R 4.0.3 > > Since this update, I get this error with the CRS function: > > CRS(SRS_string='EPSG:4326') > proj_create: SQLite error on SELECT name, type, > coordinate_system_auth_name, coordinate_system_code, datum_auth_name, > datum_code, area_of_use_auth_name, area_of_use_code, text_definition, > deprecated FROM geodetic_crs WHERE auth_name = ? AND code = ?: no such > column: area_of_use_auth_name > proj_create: SQLite error on SELECT name, type, > coordinate_system_auth_name, coordinate_system_code, datum_auth_name, > datum_code, area_of_use_auth_name, area_of_use_code, text_definition, > deprecated FROM geodetic_crs WHERE auth_name = ? AND code = ?: no such > column: area_of_use_auth_name Error in CRS(SRS_string = "EPSG:4326") : > NA > > I checked the proj package with the command apt-cache show proj-bin, I > got this. I think I have 2 packages installed With only 7.2.1 installed, I see: > library(sp) > CRS(SRS_string='EPSG:4326') CRS arguments: +proj=longlat +datum=WGS84 +no_defs > cat(wkt(CRS(SRS_string='EPSG:4326')), "\n") GEOGCRS["WGS 84 (with axis order normalized for visualization)", DATUM["World Geodetic System 1984", ELLIPSOID["WGS 84",6378137,298.257223563, LENGTHUNIT["metre",1]], ID["EPSG",6326]], PRIMEM["Greenwich",0, ANGLEUNIT["degree",0.0174532925199433], ID["EPSG",8901]], CS[ellipsoidal,2], AXIS["geodetic longitude (Lon)",east, ORDER[1], ANGLEUNIT["degree",0.0174532925199433, ID["EPSG",9122]]], AXIS["geodetic latitude (Lat)",north, ORDER[2], ANGLEUNIT["degree",0.0174532925199433, ID["EPSG",9122]]]] You are probably right that your two proj-bin (and other proj) ununtu packages are confusing each other. There should be one only, and rgdal (and sf) should be re-installed from source to pick up the correct unique version. Hope this clarifies, Roger > > Package: proj-bin > Source: proj > Priority: optional > Section: science > Installed-Size: 470 > Maintainer: Debian GIS Project > <pkg-grass-de...@lists.alioth.debian.org> > Architecture: amd64 > Version: 7.2.0-1~focal0 > Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.0), libproj19 (>= 7.2.0), > libstdc++6 ( >= 5.2) > Filename: pool/main/p/proj/proj-bin_7.2.0-1~focal0_amd64.deb > > Package: proj-bin > Architecture: amd64 > Version: 6.3.1-1 > Priority: extra > Section: universe/science > Source: proj > Origin: Ubuntu > Maintainer: Ubuntu Developers <ubuntu-devel-disc...@lists.ubuntu.com> > Original-Maintainer: Debian GIS Project > <pkg-grass-de...@lists.alioth.debian.org > > > Bugs: https://bugs.launchpad.net/ubuntu/+filebug > Installed-Size: 319 > Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.0), libproj15 (>= 6.2.1), > libstdc++6 ( >= 5.2) > Filename: pool/universe/p/proj/proj-bin_6.3.1-1_amd64.deb > Task: ubuntustudio-video, ubuntustudio-publishing, ubuntustudio-photography, > ubu > ntustudio-graphics > > > Thank you > Nicolas > > [Logo-Signature-INRAE] > > Bdat.gissol.fr > > Nicolas Saby > Chef de projet en information statistique > https://orcid.org/0000-0001-8964-1194 > > > -- Roger Bivand Department of Economics, Norwegian School of Economics, Helleveien 30, N-5045 Bergen, Norway. voice: +47 55 95 93 55; e-mail: roger.biv...@nhh.no https://orcid.org/0000-0003-2392-6140 https://scholar.google.no/citations?user=AWeghB0AAAAJ&hl=en _______________________________________________ R-sig-Geo mailing list R-sig-Geo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-geo