[Matplotlib-users] symlog linear to log transition plot position?
Hi I need to use the symlog yscale in my graph, I have a lot of data that needs to be displayed linearly, with a small fraction at the upper end of the range that needs to be displayed in log scale due to its distance from the main data. The symlog scale works great, however I'd like to adjust the actual vertical graph position where it crosses from linear to log (not the threshold), because right now only ~25% of the y space is being given to linear, and I'd like it to be more like 80%. Is this possible? Thanks! David -- Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ ___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] symlog linear to log transition plot position?
On Tue, May 1, 2012 at 6:42 AM, David Erickson wrote: > Hi I need to use the symlog yscale in my graph, I have a lot of data > that needs to be displayed linearly, with a small fraction at the upper > end of the range that needs to be displayed in log scale due to its > distance from the main data. The symlog scale works great, however I'd > like to adjust the actual vertical graph position where it crosses from > linear to log (not the threshold), because right now only ~25% of the y > space is being given to linear, and I'd like it to be more like 80%. Is > this possible? > > Thanks! > David > > Isn't linthreshy what you are looking for? It denotes the range where the scale is linear. So, if it is 25, then from -25 to 25 the scale will be linear. After 25, it will be log. Maybe I am missing something in your description? Cheers! Ben Root -- Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] probable issues with Axes3D.scatter working unusually?
On Mon, Apr 30, 2012 at 4:02 PM, Tanim Islam wrote: > Yes, sorry about that. I hope this now works. > > Tanim Islam > > I can confirm your results. I am looking into it. What version of matplotlib are you using? Ben Root -- Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
[Matplotlib-users] Documentation
Hi, The documention on building matplotlib from source ( http://matplotlib.sourceforge.net/users/installing.html ) says the following : "If you are on debian/ubuntu, you can get all the dependencies required to build matplotlib with: sudo apt-get build-dep python-matplotlib" However, doing so will force use to install over 800Mo of useless packages. The dependencies mentioned after that (pytvhon,numpy, libpng, freetype) are sufficient for building from source. Could you edit that ? Thanks -- Alexis Praga -- Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ ___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] Documentation
Actually, you will still need "python-dev" for compiling. Sorry. On Tue, May 1, 2012 at 5:21 PM, Alexis Praga wrote: > Hi, > > The documention on building matplotlib from source ( > http://matplotlib.sourceforge.net/users/installing.html ) > says the following : > > "If you are on debian/ubuntu, you can get all the dependencies > required to build matplotlib with: > sudo apt-get build-dep python-matplotlib" > > However, doing so will force use to install over 800Mo of useless packages. > The dependencies mentioned after that (pytvhon,numpy, libpng, > freetype) are sufficient for building from source. > Could you edit that ? > > > Thanks > > -- > Alexis Praga -- Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ ___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] Documentation
Can you provide a list of all of the packages that "apt-get build-dep python-matplotlib" installs? I think there's more required than what you listed. For example, it installs a C++ compiler, which is required. We can't assume the user has anything already, which is why build-dep is so convenient. Mike On 05/01/2012 11:21 AM, Alexis Praga wrote: > Hi, > > The documention on building matplotlib from source ( > http://matplotlib.sourceforge.net/users/installing.html ) > says the following : > > "If you are on debian/ubuntu, you can get all the dependencies > required to build matplotlib with: > sudo apt-get build-dep python-matplotlib" > > However, doing so will force use to install over 800Mo of useless packages. > The dependencies mentioned after that (pytvhon,numpy, libpng, > freetype) are sufficient for building from source. > Could you edit that ? > > > Thanks > > -- > Alexis Praga > > -- > Live Security Virtual Conference > Exclusive live event will cover all the ways today's security and > threat landscape has changed and how IT managers can respond. Discussions > will include endpoint security, mobile security and the latest in malware > threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ > ___ > Matplotlib-users mailing list > Matplotlib-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/matplotlib-users -- Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ ___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] probable issues with Axes3D.scatter working unusually?
Hello, I find this problem on matplotlib version 1.0.1 Tanim Islam On Tue, 1 May 2012, Benjamin Root wrote: On Mon, Apr 30, 2012 at 4:02 PM, Tanim Islam wrote: Yes, sorry about that. I hope this now works. Tanim Islam I can confirm your results. I am looking into it. What version of matplotlib are you using? Ben Root -- Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
[Matplotlib-users] tight_layout() causes RuntimeError on OSX
Hey guys, I'm trying to use tight_layout() to fix up some subplot grossness, but whenever I call it, I get: Traceback (most recent call last): File "test.py", line 16, in plt.tight_layout() File "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/pyplot.py", line 1056, in tight_layout fig.tight_layout(pad=pad, h_pad=h_pad, w_pad=w_pad) File "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/figure.py", line 1415, in tight_layout pad=pad, h_pad=h_pad, w_pad=w_pad) File "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/tight_layout.py", line 117, in auto_adjust_subplotpars tight_bbox_raw = union([ax.get_tightbbox(renderer) for ax in subplots]) File "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/axes.py", line 8396, in get_tightbbox bb.append(self.title.get_window_extent(renderer)) File "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/text.py", line 743, in get_window_extent bbox, info = self._get_layout(self._renderer) File "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/text.py", line 296, in _get_layout ismath=False) File "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/backends/backend_macosx.py", line 164, in get_text_width_height_descent width, height, descent = self.gc.get_text_width_height_descent(unicode(s), family, size, weight, style) RuntimeError: CGContextRef is NULL I've googled around, but no answers have been found. Is this a known issue, and if it's not, how can I go about fixing it? Thanks, -E -- Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] tight_layout() causes RuntimeError on OSX
On Tue, May 1, 2012 at 3:04 PM, Elliot Saba wrote: > Hey guys, I'm trying to use tight_layout() to fix up some subplot > grossness, but whenever I call it, I get: > > Traceback (most recent call last): > File "test.py", line 16, in > plt.tight_layout() > File > "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/pyplot.py", > line 1056, in tight_layout > fig.tight_layout(pad=pad, h_pad=h_pad, w_pad=w_pad) > File > "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/figure.py", > line 1415, in tight_layout > pad=pad, h_pad=h_pad, w_pad=w_pad) > File > "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/tight_layout.py", > line 117, in auto_adjust_subplotpars > tight_bbox_raw = union([ax.get_tightbbox(renderer) for ax in subplots]) > File > "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/axes.py", > line 8396, in get_tightbbox > bb.append(self.title.get_window_extent(renderer)) > File > "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/text.py", > line 743, in get_window_extent > bbox, info = self._get_layout(self._renderer) > File > "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/text.py", > line 296, in _get_layout > ismath=False) > File > "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/backends/backend_macosx.py", > line 164, in get_text_width_height_descent > width, height, descent = > self.gc.get_text_width_height_descent(unicode(s), family, size, weight, > style) > RuntimeError: CGContextRef is NULL > > I've googled around, but no answers have been found. Is this a known > issue, and if it's not, how can I go about fixing it? > Thanks, > -E > > When I run the macosx backend (which appears to be what you're using), I get the following output: tight_layout : falling back to Agg renderer and the figure appears to be rendered with TkAgg . So it appears that it's a known issue on the macosx backend. And, apparently, the suggested work-around is to use an Agg backend. -Tony -- Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] tight_layout() causes RuntimeError on OSX
That does indeed work. Thank you. -E On Tue, May 1, 2012 at 6:45 PM, Tony Yu wrote: > > > On Tue, May 1, 2012 at 3:04 PM, Elliot Saba wrote: > >> Hey guys, I'm trying to use tight_layout() to fix up some subplot >> grossness, but whenever I call it, I get: >> >> Traceback (most recent call last): >> File "test.py", line 16, in >> plt.tight_layout() >> File >> "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/pyplot.py", >> line 1056, in tight_layout >> fig.tight_layout(pad=pad, h_pad=h_pad, w_pad=w_pad) >> File >> "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/figure.py", >> line 1415, in tight_layout >> pad=pad, h_pad=h_pad, w_pad=w_pad) >> File >> "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/tight_layout.py", >> line 117, in auto_adjust_subplotpars >> tight_bbox_raw = union([ax.get_tightbbox(renderer) for ax in >> subplots]) >> File >> "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/axes.py", >> line 8396, in get_tightbbox >> bb.append(self.title.get_window_extent(renderer)) >> File >> "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/text.py", >> line 743, in get_window_extent >> bbox, info = self._get_layout(self._renderer) >> File >> "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/text.py", >> line 296, in _get_layout >> ismath=False) >> File >> "/Users//.homebrew/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/matplotlib/backends/backend_macosx.py", >> line 164, in get_text_width_height_descent >> width, height, descent = >> self.gc.get_text_width_height_descent(unicode(s), family, size, weight, >> style) >> RuntimeError: CGContextRef is NULL >> >> I've googled around, but no answers have been found. Is this a known >> issue, and if it's not, how can I go about fixing it? >> Thanks, >> -E >> >> > When I run the macosx backend (which appears to be what you're using), I > get the following output: > > tight_layout : falling back to Agg renderer > > and the figure appears to be rendered with TkAgg . So it appears that it's > a known issue on the macosx backend. And, apparently, the suggested > work-around is to use an Agg backend. > > -Tony > > -- Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
