[ccp4bb] AW: Re: [ccp4bb] Van der waals force

2017-12-11 Thread Herman . Schreuder
Auftrag von chemocev marker Gesendet: Samstag, 9. Dezember 2017 16:57 An: CCP4BB@JISCMAIL.AC.UK Betreff: [EXTERNAL] Re: [ccp4bb] Van der waals force Hi Thanks for your good help and I am wondering is there clear way to show these forces like H-bond. I tried KING and can see the VDW radii but not the

Re: [ccp4bb] Van der waals force

2017-12-09 Thread Paul Emsley
On 09/12/2017 15:56, chemocev marker wrote: I am wondering is there clear way to show these forces like H-bond. I tried KING and can see the VDW radii but not the visual representation. Does coot has any option for this? Coot uses the VdW radii in the Refmac monomer library. Maybe Measures -

Re: [ccp4bb] Van der waals force

2017-12-09 Thread chemocev marker
runo P. Klaholz > Centre for Integrative Biology > Institute of Genetics and of Molecular and Cellular Biology > 67404 ILLKIRCH > FRANCE > http://igbmc.fr/Klaholz > > > > > *From:* CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK > ] *On Behalf Of *chemocev marker

Re: [ccp4bb] Van der waals force

2017-12-07 Thread HERMAN VAN TILBEURGH
tics and of Molecular and Cellular Biology > 67404 ILLKIRCH > FRANCE > http://igbmc.fr/Klaholz <http://igbmc.fr/Klaholz> > > > > > From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK > <mailto:CCP4BB@JISCMAIL.AC.UK>] On Behalf Of chemocev marker &g

Re: [ccp4bb] Van der waals force

2017-12-07 Thread Bruno KLAHOLZ
board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of chemocev marker Sent: 08 December 2017 07:55 To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] Van der waals force Hi I just have a basic question if the Van der waals interaction will exist between the hydrophobic residues or it can also be contributed by

[ccp4bb] Van der waals force

2017-12-07 Thread chemocev marker
Hi I just have a basic question if the Van der waals interaction will exist between the hydrophobic residues or it can also be contributed by the polar residues as well. What distance is required for the Van der waals interaction. best Jiri