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Original Message
Subject:Re: [ccp4bb] sugar and coot
Date: Wed, 30 Nov 2011 19:42:54 +
From: Paul Emsley
To: d...@iwonka.med.virginia.edu
CC: CCP4BB@JISCMAIL.AC.UK
On 30/11/11 17:07, Heping Zheng wrote:
The issue I
The issue I would raise here is not just for coot, but also for PDB format
itself. Last time I asked on ACA2011, Dr. Berman said polysacchride
residues in PDB is still not yet uniformly represented.
The issue I have is to polysacchride chains refinement in general, but
here more specific about bra
On 22/11/11 00:16, Jan van Agthoven wrote:
Hi everyone!
Does anyone know if there is a way of auto-refining a sugar in Coot?
Such a tool (if I understand correctly what you want) does not yet
exist. However, I believe that things are not in as poor a state as one
might infer from other posts
You can also try Jligand to generate your cif file
J
From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of Jan van
Agthoven
Sent: Tuesday, 22 November 2011 1:17 p.m.
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] sugar and coot
Hi everyone!
Does anyone know if there is a way of
Hi,
I'm not sure if that is what you are looking for, but if you want to use
the "real space refine zone" function in coot with sugars that is possible.
For a monosaccharide you will need a cif dictionary with the restraint
definitions - in some cases present in the refmac monomer database, but
Hi everyone!
Does anyone know if there is a way of auto-refining a sugar in Coot?
Jan
