Re: [Freesurfer] " quantifyThalamicNuclei.sh" commend does not work..

gt; From: <mailto:freesurfer-boun...@nmr.mgh.harvard.edu>> on behalf of Haewon Roh > mailto:rofree...@gmail.com>> > Reply-To: Freesurfer support list <mailto:freesurfer@nmr.mgh.harvard.edu>> > Date: Wednesday, August 19, 2020 at 03:26 > To: "freesurfer@nmr

[Freesurfer] Hippocampal subfields --> normalization

External Email - Use Caution Hi. team! Recently, I submitted a paper dealing with volumes of hippocampus and its subfields in epilepsy patients who have significantly reduced hippocampal volume (compared with normal controls) and, in that paper, I used the normalization method u

[Freesurfer] Re-posting about normalization of hippocampal subfields

External Email - Use Caution Hi. team! Recently, I submitted a paper dealing with volumes of hippocampus and its subfields in epilepsy patients who have significantly reduced hippocampal volume (compared with normal controls) and, in that paper, I used the normalization metho

[Freesurfer] Hippocampus_substructures_normalization

External Email - Use Caution Hi. team! Recently, I submitted a paper dealing with volumes of hippocampus and its subfields in epilepsy patients who have significantly reduced hippocampal volume (compared with normal controls) and, in that paper, I used the normalization method u

[Freesurfer] Needing advises for results in my study.

External Email - Use Caution Hi. Recently, I analyzed patients who have taken 1.5T MRI ; (Because they had to go in MRI room with some metal materials) and normal controls who took 3.0T MRI. And, after recon and preprocessing of each group of patients and controls in freesurfer v6

[Freesurfer] Quetion about thalamic nuclei segmentation in freesurfer v7

External Email - Use Caution Hi. I have a quetion about thalamic nuclei segmentation process in freesurfer v7. Now, I’ve got a large amounts of patients samples which were already pre-processed using “recon -all” pipeline in freesurfer version 6, but I want to know their spec