.ces.nii --glmdir point1_masked.rfx
--nii --surf fsaverage lh
Thanks for the help!
Maya
Message: 1
Date: Tue, 10 Sep 2013 15:37:01 -0400
From: Maya Rosen
Subject: [Freesurfer] statistically truncate negative values
To: freesurfer@nmr.mgh.harvard.edu
Message-ID:
Content-Type: text/plain; charset=&q
Hi All,
I have two conditions of interest in my GLM analysis, Condition A and
Condition B. I would like to make a contrast of Condition A and Condition B
that includes only those vertices that are significantly positively
activated when compared to the Passive Viewing baseline. In other words, I
w
Dear Freesurfers,
I'm really glad to see the (relatively) new functional connectivity
commands. It seems to be working really well.
Has anyone tried to do task-related functional connectivity? I would like
to compare functional connectivity with the hippocampus during two
different conditions of
Hi all,
In v5.1.0 is there a way to do a volume analysis in native space? I know
when you do mkanalysis for the surface you can use -surface self. But for
the volume analysis the only flag I see is -mni305. Is there some way to
give it a native space flag for the volume?
Thanks!
Maya
__
Hi all,
We've been trying to use FsFast for functional connectivity analysis using
the left hippocampus as the seed (isolated from aseg). We used the
following command to make the analysis:
mkanalysis-sess -fwhm 0 -fsd bold -mcextreg -polyfit 2 -TR 2.6 -analysis
lhippo_fcfsfast-analysis -nuisreg
