Re: [Freesurfer] Hippocampal segmentation: version needed

2012-07-04 Thread Koen Van Leemput
Hi Lorenzo, The hippocampal subfield segmentation routines are only available from FreeSurfer 5.1, so you'll need that version to run the code. If all your data is already pre-processed with an older version of FreeSurfer, you might be able to simply run the hippocampal subfield segmentation rout

[Freesurfer] Hippocampal segmentation: version needed

2012-07-04 Thread lorenzo pasquini
Dear Freesurfer experts, I used freesurfer v4.3.0 on anatomical data (T1). I am trying to segment hippocampal subfields with the following command:  recon-all -s subjname -hippo-subfields unfortunately I get the following error: ERROR: Flag -hippo-subfields unrecognized I have already the files a