] Infant Freesurfer exiting without error
I included the list of FS labels with their IDs. When you know the
correspondences, you should be able to use scripts / FS commands to change the
labels automatically.
Lila
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf
: Tuesday, May 11, 2021 4:28 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Infant Freesurfer exiting without error
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Hello,
Getting a list of the labels would be fantastic! Also, when relabeling the
segmentations, do you normally just do that by hand
of Zollei, Lilla,Ph.D.
Sent: Thursday, May 6, 2021 4:14 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] Infant Freesurfer exiting without error
Hi Colleen,
The segmentations just need to be relabled in order to match the labels that
are produced by the infantFS pipeline. I am happy to
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of COLLEEN PLETCHER
Sent: Tuesday, April 27, 2021 4:11 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Infant Freesurfer exiting without error
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Hi,
I was using FSL anat in
help!
-Colleen
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Zollei, Lilla,Ph.D.
Sent: Saturday, April 24, 2021 2:14 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Infant Freesurfer exiting without error
Hi Colleen,
Do you have all the FS
Sent: Tuesday, April 13, 2021 12:48 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Infant Freesurfer exiting without error
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Hello,
I have attached the log file and the command used is the first line, please let
me know if you need anything else
, 2021 12:48 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Infant Freesurfer exiting without error
External Email - Use Caution
Hello,
I have attached the log file and the command used is the first line, please let
me know if you need anything else.
-Colleen
.
Sent: Tuesday, April 13, 2021 12:33 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Infant Freesurfer exiting without error
Hi Colleen,
Can you send the exact command that you used and also the log file for more
information?
Best, Lilla
From
@nmr.mgh.harvard.edu
Subject: [Freesurfer] Infant Freesurfer exiting without error
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Hi,
I am trying to run infant freesurfer using the --segfile and --masked options.
When I attempt to run it, it runs for a bit and then I get this:
USAGE: mri_or fname1 fname2 ..
After
External Email - Use Caution
Hi,
I am trying to run infant freesurfer using the --segfile and --masked options.
When I attempt to run it, it runs for a bit and then I get this:
USAGE: mri_or fname1 fname2 ..
After this, the program exits. I am not getting any error, so I a
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