Re: [Freesurfer] Spatial Smoothing in the processing stream for fMRI-freesurfer integration

2010-07-16 Thread Douglas N Greve
Don't do 3D spatial smoothing when you are preparing for surface-based analysis. The order of the 2D smoothing/estimation will not matter too much because they are both linear operations (assuming you are not carrying forward the variances to use in a weighted least squares way). doug Joonkoo

[Freesurfer] Spatial Smoothing in the processing stream for fMRI-freesurfer integration

2010-07-16 Thread Joonkoo Park
Dear freesurfers, How is spatial smoothing performed during a conventional fmri processing stream? I used SPM to (1) run the 1st level analysis on each subject, (2) transformed the resulting volumetric statistical parametric map to the surface space, (3) normalized each individual's surface map o