Re: [galaxy-dev] workflow input param issue

2012-12-04 Thread Dannon Baker
gt; > > > From: galaxy-dev-boun...@lists.bx.psu.edu > [mailto:galaxy-dev-boun...@lists.bx.psu.edu] On Behalf Of Marc Logghe > Sent: Monday, December 03, 2012 11:46 AM > To: galaxy-dev@lists.bx.psu.edu > Subject: [galaxy-dev] workflow input param issue > > Hi, > I h

Re: [galaxy-dev] workflow input param issue

2012-12-03 Thread Marc Logghe
From: galaxy-dev-boun...@lists.bx.psu.edu [mailto:galaxy-dev-boun...@lists.bx.psu.edu] On Behalf Of Marc Logghe Sent: Monday, December 03, 2012 11:46 AM To: galaxy-dev@lists.bx.psu.edu Subject: [galaxy-dev] workflow input param issue Hi, I have a workflow that basically needs a select parameter as

Re: [galaxy-dev] workflow input param issue

2012-12-03 Thread Marc Logghe
Hi John, Your patch works indeed. Issues-- Thanks, Marc -Original Message- From: jmchil...@gmail.com [mailto:jmchil...@gmail.com] On Behalf Of John Chilton Sent: Monday, December 03, 2012 2:58 PM To: Marc Logghe Cc: galaxy-dev@lists.bx.psu.edu Subject: Re: [galaxy-dev] workflow input

Re: [galaxy-dev] workflow input param issue

2012-12-03 Thread John Chilton
I am really very sorry about that. It seems this must be related to my pull request "fixing" multiple input tool parameters. I have spent some time this morning trying to reproduce your error, but I cannot. That said I think I can fix it, this patch should work: diff --git a/templates/workflow/run

[galaxy-dev] workflow input param issue

2012-12-03 Thread Marc Logghe
Hi, I have a workflow that basically needs a select parameter as input. 2 steps in the workflow actually need the very same input. I don't think there is a (easy) way to let the user only input the parameter once and that it is passed to both steps. Anyhow, currently - as a workaround and not ve