[R] Unbalanced design help

2007-01-27 Thread Michael Kubovy
Dear r-helpers, I am looking at a designed experiment in which one predictor variable has 5 levels (0, ..., 4) and the other has 6 levels (1.1, ..., 1.6), with 33 observations per cell. This design was given to 13 subjects. 0 1 2 3 4 1.1 32 33 0 0 0 1.2 33 33 33 0 0 1.3

Re: [R] unbalanced mixed effects models for fully factorial designs

2006-08-09 Thread Spencer Graves
Dear Prof. Logan: Are you familiar with 'lme' in the 'nlme' package? Superlative documentation for the 'nlme' package is Pinheiro and Bates (2000) Mixed effects models in S and S-PLUS (Springer, listed as 'available' in the catalog of your university library). The standard R distrib

[R] unbalanced mixed effects models for fully factorial designs

2006-08-02 Thread Murray Logan
Does anyone know of a way of dealing with unbalanced mixed effects (fixed and random factors) for fully factorial designs. An example of such data is given below; The response variable is SQRTRECRUITS SEASON is a random factor DENSITY is a fixed factor Thus DENSITY:SEASON is a fixed factor. The

Re: [R] Unbalanced Manova

2006-04-01 Thread Peter Dalgaard
"Naiara S. Pinto" <[EMAIL PROTECTED]> writes: > Dear all, > > I need to do a Manova but I have an unbalanced design. I have > morphological measurements similar to the iris dataset, but I don't have > the same number of measurements for all species. Does anyone know a > procedure to do Manova wit

Re: [R] Unbalanced Manova

2006-04-01 Thread Spencer Graves
What have you tried? I just did help.searhc("manova"), which led me to manova and summary.manova, which contained a balanced example, which I unbalanced as follows: tear <- c(6.5, 6.2, 5.8, 6.5, 6.5, 6.9, 7.2, 6.9, 6.1, 6.3, 6.7, 6.6, 7.2, 7.1, 6.8, 7.1, 7.0, 7.2, 7.5,

[R] Unbalanced Manova

2006-03-30 Thread Naiara S. Pinto
Dear all, I need to do a Manova but I have an unbalanced design. I have morphological measurements similar to the iris dataset, but I don't have the same number of measurements for all species. Does anyone know a procedure to do Manova with this kind of input in R? Thank you very much, Naiara.

RE: [R] unbalanced design

2004-12-01 Thread Berton Gunter
alf Of Damián Cirelli > Sent: Wednesday, December 01, 2004 2:03 PM > To: [EMAIL PROTECTED] > Subject: Re: [R] unbalanced design > > > Thanks Peter, > > I still wonder why it thinks it's unbalanced... > > __ [EMAIL PROT

Re: [R] unbalanced design

2004-12-01 Thread Damián Cirelli
Thanks Peter, I still wonder why it thinks it's unbalanced... The se's of the contrasts are different than the se's of the means, which is the point of se=T in model.tables (type "means") I would have thought. No big deal though, the following code makes a nice table with the se's of the mean

Re: [R] unbalanced design

2004-12-01 Thread Peter Alspach
Damián I asked a similar question a few months ago (3 August 2004): > temp.aov <- aov(S~rep+trt1*trt2*trt3, data=dummy.data) > model.tables(temp.aov, type='mean', se=T) > > Returns the means, but states "Design is unbalanced - use se.contrasts > for se's" which is a little surprising since the d

[R] unbalanced design

2004-12-01 Thread Damián Cirelli
Hi all, I'm new to R and have the following problem: I have a 2 factor design (a has 2 levels, b has 3 levels). I have an object kidney.aov which is an aov(y ~ a*b), and when I ask for model.tables(kidney.avo, se=T) I get the following message along with the table of effects: Design is unbalanc

RE: [R] unbalanced design for anova with low number of replicates

2004-06-28 Thread Liaw, Andy
Arne, For this sort of things, my suggestion is that you try to seek assistance from local statistician(s), and I'd be very surprised if there's none for you. Data arising from unbalanced designs need no special tools for model fitting. The garden variety linear models work just fine. The probl

[R] unbalanced design for anova with low number of replicates

2004-06-28 Thread Arne.Muller
Hello, I'm wondering what's the best way to analyse an unbalanced design with a low number of replicates. I'm not a statistician, and I'm looking for some direction for this problem. I've a 2 factor design: Factor batch with 3 levels, and factor dose within each batch with 5 levels. Dose leve

[R] unbalanced

2004-02-15 Thread Don Driscoll
G'day, The following code gives a two-way factorial anova, which is completely balanced. However when model.tables is called, the response is: "Design is unbalanced - use se.contrasts for se's", and SEs are not available. Why doesn't R think my design is balanced and how do I convince it that i