debian 9 stretch
netbeans-8.2-201609300101-javaee.zip
wildfly-11.0.0.Final.zip
standalone-full.xml

When adding a server, on step #3 it asks for the port, which defaults to
port 8080.

If you later decide you want to change the port in the standalone-full.xml,
NetBeans can't start the server, it still looks for the previous port
number assigned.

Is there a configuration file for the servers that I can edit?

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