I am failing to build 8.5 on one machine.  I had a working build of 8.4,
built from source from a git clone, and used git pull to update (to
commit 934b744f65) from trac/master.  After the first fail I did "make
distclean" before another make.

The failing package is cypari-1.3.1 and the log file is attached.

This is on a laptop running ubuntu 18.0.4.1 LTS.


On Thu, 27 Dec 2018 at 16:04, Volker Braun <vbraun.n...@gmail.com> wrote:

> Binaries are now on up!
>
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Found local metadata for cypari-1.3.1
Using cached file /usr/local/sage/upstream/cypari2-1.3.1.tar.gz
cypari-1.3.1
====================================================
Setting up build directory for cypari-1.3.1
Finished extraction
No patch files found in ../patches
****************************************************
Host system:
Linux john-Latitude-E5470 4.15.0-43-generic #46-Ubuntu SMP Thu Dec 6 14:45:28 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux
****************************************************
C compiler: gcc
C compiler version:
Using built-in specs.
COLLECT_GCC=/usr/bin/gcc
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/7/lto-wrapper
OFFLOAD_TARGET_NAMES=nvptx-none
OFFLOAD_TARGET_DEFAULT=1
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 7.3.0-27ubuntu1~18.04' --with-bugurl=file:///usr/share/doc/gcc-7/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++ --prefix=/usr --with-gcc-major-version-only --program-suffix=-7 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --enable-default-pie --with-system-zlib --with-target-system-zlib --enable-objc-gc=auto --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
Thread model: posix
gcc version 7.3.0 (Ubuntu 7.3.0-27ubuntu1~18.04) 
****************************************************
No record that 'cypari' was ever installed; skipping uninstall
Installing cypari-1.3.1
Installing package cypari2 using pip2
Ignoring indexes: https://pypi.org/simple
Created temporary directory: /tmp/pip-ephem-wheel-cache-Ijm0ds
Created temporary directory: /tmp/pip-req-tracker-15_Chd
Created requirements tracker '/tmp/pip-req-tracker-15_Chd'
Created temporary directory: /tmp/pip-install-i4LjJL
Processing /usr/local/sage/local/var/tmp/sage/build/cypari-1.3.1/src
  Created temporary directory: /tmp/pip-req-build-qIy1wA
  Added file:///usr/local/sage/local/var/tmp/sage/build/cypari-1.3.1/src to build tracker '/tmp/pip-req-tracker-15_Chd'
  Running setup.py (path:/tmp/pip-req-build-qIy1wA/setup.py) egg_info for package from file:///usr/local/sage/local/var/tmp/sage/build/cypari-1.3.1/src
    Running command python setup.py egg_info
    running egg_info
    creating pip-egg-info/cypari2.egg-info
    writing pip-egg-info/cypari2.egg-info/PKG-INFO
    writing top-level names to pip-egg-info/cypari2.egg-info/top_level.txt
    writing dependency_links to pip-egg-info/cypari2.egg-info/dependency_links.txt
    writing manifest file 'pip-egg-info/cypari2.egg-info/SOURCES.txt'
    Generating PARI functions: (!_) (#_) (%) (%#) (+_) (-_) Catalan Col Colrev (DEBUGLEVEL) Euler I List Map Mat Mod (O) (O(_^_)) Pi Pol Polrev Qfb Ser Set Str Strchr Strexpand Strprintf Strtex Vec Vecrev Vecsmall ([_.._]) ([_|_<-_,_;_]) ([_|_<-_,_]) (_!) (_!=_) (_%=_) (_%_) (_&&_) (_') (_(_)) (_*=_) (_*_) (_++) (_+=_) (_+_) (_--) (_-=_) (_-_) (_.a1) (_.a2) (_.a3) (_.a4) (_.a6) (_.area) (_.b2) (_.b4) (_.b6) (_.b8) (_.bid) (_.bnf) (_.c4) (_.c6) (_.clgp) (_.codiff) (_.cyc) (_.diff) (_.disc) (_.e) (_.eta) (_.f) (_.fu) (_.gen) (_.group) (_.index) (_.j) (_.mod) (_.nf) (_.no) (_.omega) (_.orders) (_.p) (_.pol) (_.polabs) (_.r1) (_.r2) (_.reg) (_.roots) (_.sign) (_.t2) (_.tate) (_.tu) (_.zk) (_.zkst) (_/=_) (_/_) (_<<=_) (_<<_) (_<=_) (_<_) (_===_) (_==_) (_>=_) (_>>=_) (_>>_) (_>_) (_F2xq_log_Coppersmith_worker) (_Flxq_log_Coppersmith_worker) (_Fp_log_sieve_worker) (_ZM_det_worker) (_ZM_inv_worker) (_ZX_ZXY_resultant_worker) (_ZX_resultant_worker) (_ZabM_inv_worker) (_[_,]) (_[_,_]) (_[_.._,_.._]) (_[_.._]) (_\/=_) (_\/_) (_\=_) (_\_) (_^_) (_^s) (__) (_aprcl_step4_worker) (_aprcl_step6_worker) (_avma) (_badtype) (_cast) (_cgetg) (_const_expr) (_const_quote) (_const_real) (_const_smallreal) (_decl_base) (_decl_ext) (_def_TeXstyle) (_def_breakloop) (_def_colors) (_def_compatible) (_def_datadir) (_def_debug) (_def_debugfiles) (_def_debugmem) (_def_echo) (_def_factor_add_primes) (_def_factor_proven) (_def_format) (_def_graphcolormap) (_def_graphcolors) (_def_help) (_def_histfile) (_def_histsize) (_def_lines) (_def_linewrap) (_def_log) (_def_logfile) (_def_nbthreads) (_def_new_galois_format) (_def_output) (_def_parisize) (_def_parisizemax) (_def_path) (_def_plothsizes) (_def_prettyprinter) (_def_primelimit) (_def_prompt) (_def_prompt_cont) (_def_psfile) (_def_readline) (_def_realbitprecision) (_def_realprecision) (_def_recover) (_def_secure) (_def_seriesprecision) (_def_simplify) (_def_sopath) (_def_strictargs) (_def_strictmatch) (_def_threadsize) (_def_threadsizemax) (_def_timer) (_default_check) (_default_marker) (_derivfun) (_diffptr) (_err_primes) (_err_type) (_eval_mnemonic) (_factor_Aurifeuille) (_factor_Aurifeuille_prime) (_forcomposite_init) (_forcomposite_next) (_formatcode) (_forpart_init) (_forpart_next) (_forperm_init) (_forperm_next) (_forprime_init) (_forprime_next) (_forprime_next_) (_forprimestep_init) (_forsubset_init) (_forsubset_next) (_forvec_init) (_forvec_next) (_gc_needed) (_gerepileall) (_gerepileupto) (_header_algebras) (_header_combinatorics) (_header_conversions) (_header_default) (_header_elliptic_curves) (_header_graphic) (_header_l_functions) (_header_linear_algebra) (_header_modular_forms) (_header_modular_symbols) (_header_number_fields) (_header_number_theoretical) (_header_operators) (_header_polynomials) (_header_programming/control) (_header_programming/parallel) (_header_programming/specific) (_header_sums) (_header_transcendental) (_iferr_CATCH) (_iferr_CATCH_reset) (_iferr_ENDCATCH) (_iferr_error) (_iferr_rethrow) (_low_stack_lim) (_maxprime) (_multi_if) (_ndec2nbits) (_ndec2prec) (_norange) (_nxMV_polint_worker) (_pareval_worker) (_parfor_worker) (_parselect_worker) (_parvector_worker) (_polint_worker) (_polmodular_worker) (_proto_code) (_proto_max_args) (_proto_ret) (_safecoeff) (_stack_lim) (_strtoclosure) (_tovec) (_tovecprec) (_type_preorder) (_typedef) (_u_forprime_init) (_u_forprime_next) (_void_if) (_wrap_G) (_wrap_GG) (_wrap_Gp) (_wrap_bG) (_wrap_vG) (_||_) (_~) abs acos acosh addhelp addprimes agm airyTraceback (most recent call last):
      File "<string>", line 1, in <module>
      File "/tmp/pip-req-build-qIy1wA/setup.py", line 86, in <module>
        cmdclass=dict(build_ext=build_ext, bdist_egg=no_egg)
      File "/usr/local/sage/local/lib/python2.7/site-packages/setuptools/__init__.py", line 131, in setup
        return distutils.core.setup(**attrs)
      File "/usr/local/sage/local/lib/python2.7/distutils/core.py", line 151, in setup
        dist.run_commands()
      File "/usr/local/sage/local/lib/python2.7/distutils/dist.py", line 953, in run_commands
        self.run_command(cmd)
      File "/usr/local/sage/local/lib/python2.7/distutils/dist.py", line 972, in run_command
        cmd_obj.run()
      File "/usr/local/sage/local/lib/python2.7/site-packages/setuptools/command/egg_info.py", line 278, in run
        self.find_sources()
      File "/usr/local/sage/local/lib/python2.7/site-packages/setuptools/command/egg_info.py", line 293, in find_sources
        mm.run()
      File "/usr/local/sage/local/lib/python2.7/site-packages/setuptools/command/egg_info.py", line 524, in run
        self.add_defaults()
      File "/usr/local/sage/local/lib/python2.7/site-packages/setuptools/command/egg_info.py", line 560, in add_defaults
        sdist.add_defaults(self)
      File "/usr/local/sage/local/lib/python2.7/site-packages/setuptools/command/py36compat.py", line 36, in add_defaults
        self._add_defaults_ext()
      File "/usr/local/sage/local/lib/python2.7/site-packages/setuptools/command/py36compat.py", line 119, in _add_defaults_ext
        build_ext = self.get_finalized_command('build_ext')
      File "/usr/local/sage/local/lib/python2.7/distutils/cmd.py", line 312, in get_finalized_command
        cmd_obj.ensure_finalized()
      File "/usr/local/sage/local/lib/python2.7/distutils/cmd.py", line 109, in ensure_finalized
        self.finalize_options()
      File "/tmp/pip-req-build-qIy1wA/setup.py", line 50, in finalize_options
        rebuild()
      File "autogen/__init__.py", line 26, in rebuild
        G()
      File "autogen/generator.py", line 328, in __call__
        self.handle_pari_function(**v)
      File "autogen/generator.py", line 223, in handle_pari_function
        doc = get_rest_doc(function)
      File "autogen/doc.py", line 340, in get_rest_doc
        raw = get_raw_doc(function)
      File "autogen/doc.py", line 274, in get_raw_doc
        raise RuntimeError("no help found for '{}'".format(function))
    RuntimeError: no help found for 'airy'
Cleaning up...
  Removing source in /tmp/pip-req-build-qIy1wA
Removed file:///usr/local/sage/local/var/tmp/sage/build/cypari-1.3.1/src from build tracker '/tmp/pip-req-tracker-15_Chd'
Removed build tracker '/tmp/pip-req-tracker-15_Chd'
Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-req-build-qIy1wA/
Exception information:
Traceback (most recent call last):
  File "/usr/local/sage/local/lib/python2.7/site-packages/pip/_internal/basecommand.py", line 141, in main
    status = self.run(options, args)
  File "/usr/local/sage/local/lib/python2.7/site-packages/pip/_internal/commands/install.py", line 299, in run
    resolver.resolve(requirement_set)
  File "/usr/local/sage/local/lib/python2.7/site-packages/pip/_internal/resolve.py", line 102, in resolve
    self._resolve_one(requirement_set, req)
  File "/usr/local/sage/local/lib/python2.7/site-packages/pip/_internal/resolve.py", line 256, in _resolve_one
    abstract_dist = self._get_abstract_dist_for(req_to_install)
  File "/usr/local/sage/local/lib/python2.7/site-packages/pip/_internal/resolve.py", line 209, in _get_abstract_dist_for
    self.require_hashes
  File "/usr/local/sage/local/lib/python2.7/site-packages/pip/_internal/operations/prepare.py", line 298, in prepare_linked_requirement
    abstract_dist.prep_for_dist(finder, self.build_isolation)
  File "/usr/local/sage/local/lib/python2.7/site-packages/pip/_internal/operations/prepare.py", line 126, in prep_for_dist
    self.req.run_egg_info()
  File "/usr/local/sage/local/lib/python2.7/site-packages/pip/_internal/req/req_install.py", line 636, in run_egg_info
    command_desc='python setup.py egg_info')
  File "/usr/local/sage/local/lib/python2.7/site-packages/pip/_internal/utils/misc.py", line 701, in call_subprocess
    % (command_desc, proc.returncode, cwd))
InstallationError: Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-req-build-qIy1wA/
Error: installing with pip2 failed
********************************************************************************
Error installing cypari-1.3.1
********************************************************************************

real	0m1.215s
user	0m1.085s
sys	0m0.149s
************************************************************************
Error installing package cypari-1.3.1
************************************************************************
Please email sage-devel (http://groups.google.com/group/sage-devel)
explaining the problem and including the log file
  /usr/local/sage/logs/pkgs/cypari-1.3.1.log
Describe your computer, operating system, etc.
If you want to try to fix the problem yourself, *don't* just cd to
/usr/local/sage/local/var/tmp/sage/build/cypari-1.3.1 and type 'make' or whatever is appropriate.
Instead, the following commands setup all environment variables
correctly and load a subshell for you to debug the error:
  (cd '/usr/local/sage/local/var/tmp/sage/build/cypari-1.3.1' && '/usr/local/sage/sage' --sh)
When you are done debugging, you can type "exit" to leave the subshell.
************************************************************************

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