On Debian stretch, I get a compilation error making sage 8.9.beta9. The problem is in the package "cypari", the relevant log is attached:
Found local metadata for cypari-2.1.1 Attempting to download package cypari2-2.1.1.tar.gz from mirrors https://mirror.koddos.net/sagemath/spkg/upstream/cypari/cypari2-2.1.1.tar.gz [......................................................................] cypari-2.1.1 ==================================================== Setting up build directory for cypari-2.1.1 Finished extraction Applying patches from ../patches... Applying ../patches/trashcan.patch patching file cypari2/gen.pxd patching file cypari2/gen.pyx Hunk #1 succeeded at 141 (offset 6 lines). patching file cypari2/pari_instance.pyx **************************************************** Host system: Linux ural 4.9.0-9-amd64 #1 SMP Debian 4.9.168-1+deb9u4 (2019-07-19) x86_64 GNU/Linux **************************************************** C compiler: gcc C compiler version: Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/6/lto-wrapper Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 6.3.0-18+deb9u1' --with-bugurl=file:///usr/share/doc/gcc-6/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-6 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --enable-default-pie --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-6-amd64/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-6-amd64 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-6-amd64 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-target-system-zlib --enable-objc-gc=auto --enable-multiarch --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 6.3.0 20170516 (Debian 6.3.0-18+deb9u1) **************************************************** Package 'cypari' is currently not installed No legacy uninstaller found for 'cypari'; nothing to do Installing cypari-2.1.1 Installing package cypari2 using pip2 Ignoring indexes: https://pypi.org/simple Created temporary directory: /tmp/pip-ephem-wheel-cache-EMVpJz Created temporary directory: /tmp/pip-req-tracker-wfmzIV Created requirements tracker '/tmp/pip-req-tracker-wfmzIV' Created temporary directory: /tmp/pip-install-HkyCL2 Processing /srv/public/shared/sage/local/var/tmp/sage/build/cypari-2.1.1/src Created temporary directory: /tmp/pip-req-build-MoH_HZ Added file:///srv/public/shared/sage/local/var/tmp/sage/build/cypari-2.1.1/src to build tracker '/tmp/pip-req-tracker-wfmzIV' Running setup.py (path:/tmp/pip-req-build-MoH_HZ/setup.py) egg_info for package from file:///srv/public/shared/sage/local/var/tmp/sage/build/cypari-2.1.1/src Running command python setup.py egg_info running egg_info creating pip-egg-info/cypari2.egg-info writing requirements to pip-egg-info/cypari2.egg-info/requires.txt writing pip-egg-info/cypari2.egg-info/PKG-INFO writing top-level names to pip-egg-info/cypari2.egg-info/top_level.txt writing dependency_links to pip-egg-info/cypari2.egg-info/dependency_links.txt writing manifest file 'pip-egg-info/cypari2.egg-info/SOURCES.txt' error: [Errno 2] No such file or directory: '/usr/share/pari/pari.desc' Cleaning up... Removing source in /tmp/pip-req-build-MoH_HZ Removed file:///srv/public/shared/sage/local/var/tmp/sage/build/cypari-2.1.1/src from build tracker '/tmp/pip-req-tracker-wfmzIV' Removed build tracker '/tmp/pip-req-tracker-wfmzIV' Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-req-build-MoH_HZ/ Exception information: Traceback (most recent call last): File "/srv/public/shared/sage/local/lib/python2.7/site-packages/pip/_internal/cli/base_command.py", line 143, in main status = self.run(options, args) File "/srv/public/shared/sage/local/lib/python2.7/site-packages/pip/_internal/commands/install.py", line 318, in run resolver.resolve(requirement_set) File "/srv/public/shared/sage/local/lib/python2.7/site-packages/pip/_internal/resolve.py", line 102, in resolve self._resolve_one(requirement_set, req) File "/srv/public/shared/sage/local/lib/python2.7/site-packages/pip/_internal/resolve.py", line 256, in _resolve_one abstract_dist = self._get_abstract_dist_for(req_to_install) File "/srv/public/shared/sage/local/lib/python2.7/site-packages/pip/_internal/resolve.py", line 209, in _get_abstract_dist_for self.require_hashes File "/srv/public/shared/sage/local/lib/python2.7/site-packages/pip/_internal/operations/prepare.py", line 298, in prepare_linked_requirement abstract_dist.prep_for_dist(finder, self.build_isolation) File "/srv/public/shared/sage/local/lib/python2.7/site-packages/pip/_internal/operations/prepare.py", line 126, in prep_for_dist self.req.run_egg_info() File "/srv/public/shared/sage/local/lib/python2.7/site-packages/pip/_internal/req/req_install.py", line 473, in run_egg_info command_desc='python setup.py egg_info') File "/srv/public/shared/sage/local/lib/python2.7/site-packages/pip/_internal/utils/misc.py", line 705, in call_subprocess % (command_desc, proc.returncode, cwd)) InstallationError: Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-req-build-MoH_HZ/ Error: installing with pip2 failed ******************************************************************************** Error installing cypari-2.1.1 ******************************************************************************** real 0m1.345s user 0m1.088s sys 0m0.184s ************************************************************************ Error installing package cypari-2.1.1 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the log file /srv/public/shared/sage/logs/pkgs/cypari-2.1.1.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /srv/public/shared/sage/local/var/tmp/sage/build/cypari-2.1.1 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/srv/public/shared/sage/local/var/tmp/sage/build/cypari-2.1.1' && '/srv/public/shared/sage/sage' --sh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************ Found local metadata for cypari-2.1.1 Using cached file /srv/public/shared/sage/upstream/cypari2-2.1.1.tar.gz cypari-2.1.1 ==================================================== Setting up build directory for cypari-2.1.1 Finished extraction Applying patches from ../patches... Applying ../patches/trashcan.patch patching file cypari2/gen.pxd patching file cypari2/gen.pyx Hunk #1 succeeded at 141 (offset 6 lines). patching file cypari2/pari_instance.pyx **************************************************** Host system: Linux ural 4.9.0-9-amd64 #1 SMP Debian 4.9.168-1+deb9u4 (2019-07-19) x86_64 GNU/Linux **************************************************** C compiler: gcc C compiler version: Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/6/lto-wrapper Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 6.3.0-18+deb9u1' --with-bugurl=file:///usr/share/doc/gcc-6/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-6 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --enable-default-pie --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-6-amd64/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-6-amd64 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-6-amd64 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-target-system-zlib --enable-objc-gc=auto --enable-multiarch --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 6.3.0 20170516 (Debian 6.3.0-18+deb9u1) **************************************************** Package 'cypari' is currently not installed No legacy uninstaller found for 'cypari'; nothing to do Installing cypari-2.1.1 Installing package cypari2 using pip2 Ignoring indexes: https://pypi.org/simple Created temporary directory: /tmp/pip-ephem-wheel-cache-4L98l9 Created temporary directory: /tmp/pip-req-tracker-mosN7y Created requirements tracker '/tmp/pip-req-tracker-mosN7y' Created temporary directory: /tmp/pip-install-AHSkDU Processing /srv/public/shared/sage/local/var/tmp/sage/build/cypari-2.1.1/src Created temporary directory: /tmp/pip-req-build-eMwGZT Added file:///srv/public/shared/sage/local/var/tmp/sage/build/cypari-2.1.1/src to build tracker '/tmp/pip-req-tracker-mosN7y' Running setup.py (path:/tmp/pip-req-build-eMwGZT/setup.py) egg_info for package from file:///srv/public/shared/sage/local/var/tmp/sage/build/cypari-2.1.1/src Running command python setup.py egg_info running egg_info creating pip-egg-info/cypari2.egg-info writing requirements to pip-egg-info/cypari2.egg-info/requires.txt writing pip-egg-info/cypari2.egg-info/PKG-INFO writing top-level names to pip-egg-info/cypari2.egg-info/top_level.txt writing dependency_links to pip-egg-info/cypari2.egg-info/dependency_links.txt writing manifest file 'pip-egg-info/cypari2.egg-info/SOURCES.txt' error: [Errno 2] No such file or directory: '/usr/share/pari/pari.desc' Cleaning up... Removing source in /tmp/pip-req-build-eMwGZT Removed file:///srv/public/shared/sage/local/var/tmp/sage/build/cypari-2.1.1/src from build tracker '/tmp/pip-req-tracker-mosN7y' Removed build tracker '/tmp/pip-req-tracker-mosN7y' Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-req-build-eMwGZT/ Exception information: Traceback (most recent call last): File "/srv/public/shared/sage/local/lib/python2.7/site-packages/pip/_internal/cli/base_command.py", line 143, in main status = self.run(options, args) File "/srv/public/shared/sage/local/lib/python2.7/site-packages/pip/_internal/commands/install.py", line 318, in run resolver.resolve(requirement_set) File "/srv/public/shared/sage/local/lib/python2.7/site-packages/pip/_internal/resolve.py", line 102, in resolve self._resolve_one(requirement_set, req) File "/srv/public/shared/sage/local/lib/python2.7/site-packages/pip/_internal/resolve.py", line 256, in _resolve_one abstract_dist = self._get_abstract_dist_for(req_to_install) File "/srv/public/shared/sage/local/lib/python2.7/site-packages/pip/_internal/resolve.py", line 209, in _get_abstract_dist_for self.require_hashes File "/srv/public/shared/sage/local/lib/python2.7/site-packages/pip/_internal/operations/prepare.py", line 298, in prepare_linked_requirement abstract_dist.prep_for_dist(finder, self.build_isolation) File "/srv/public/shared/sage/local/lib/python2.7/site-packages/pip/_internal/operations/prepare.py", line 126, in prep_for_dist self.req.run_egg_info() File "/srv/public/shared/sage/local/lib/python2.7/site-packages/pip/_internal/req/req_install.py", line 473, in run_egg_info command_desc='python setup.py egg_info') File "/srv/public/shared/sage/local/lib/python2.7/site-packages/pip/_internal/utils/misc.py", line 705, in call_subprocess % (command_desc, proc.returncode, cwd)) InstallationError: Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-req-build-eMwGZT/ Error: installing with pip2 failed ******************************************************************************** Error installing cypari-2.1.1 ******************************************************************************** real 0m1.313s user 0m1.084s sys 0m0.176s ************************************************************************ Error installing package cypari-2.1.1 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the log file /srv/public/shared/sage/logs/pkgs/cypari-2.1.1.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /srv/public/shared/sage/local/var/tmp/sage/build/cypari-2.1.1 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/srv/public/shared/sage/local/var/tmp/sage/build/cypari-2.1.1' && '/srv/public/shared/sage/sage' --sh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************ On Tuesday, September 3, 2019 at 1:22:40 AM UTC+2, Volker Braun wrote: > > As always, you can get the latest beta version from the "develop" git > branch. Alternatively, the self-contained source tarball is at > http://www.sagemath.org/download-latest.html > > > bdf4b23d74 (trac/develop, tag: 8.9.beta9) Updated SageMath version to > 8.9.beta9 > c631202c12 Trac #28411: refresh the prompt in the installation guide > 45482b13f0 Trac #28387: Implement function that returns the balanced digit > representation of an integer > 4454ffec0d Trac #28384: py2: UnicodeDecodeError in doctest framework > exception handling > 0c8192c3de Trac #28366: Lattice precision timing test fails on Windows 7 > due to low-ish clock resolution > 5e1b351a89 Trac #28274: EnumeratedFamily should use integers as keys > ec9715bb88 Trac #28172: Profile of a Finite Permutation Group > dcf58df8b5 Trac #28154: SciPy: patch for missing coding lines in some > source files > 82d75fd335 Trac #27917: Standardize doctest headers > 04d5aab185 Trac #25817: RuntimeError: Encountered operator mismatch in > maxima-to-sr translation, integrate > 45314bcbcf Trac #23639: Strange errors with roots() of polynomials over > polynomial rings > f29cee985f Trac #28419: new pyflakes miscellanous cleanup > 77bddf472a Trac #28417: removed deprecated stuff in integer_mod > c565a3aa0a Trac #28412: upgrade Pynac to 0.7.26 > 2e47b34ab8 Trac #28408: fixing a few invalid escape sequences > 877d26294b Trac #28407: py3: fix quantum_group_gap and graph_latex > 3db8be3dc0 Trac #28399: remove deprecated things in integer.pyx > 6a837c5ea6 Trac #27818: Meet-subsemilattice for lattices > 2920f66a0e Trac #27798: Add `backend` option to associahedron and flow > polytope > 98f3199887 Trac #27587: Follow up to #25680: Fix tempfile handling in > doctests > 0719be21c2 Trac #27473: Matrix inversion fails over a Laurent series ring > 842a3dcd41 Trac #27444: Expose multithreaded fflas-ffpack features > cee95e6b38 Trac #28404: Sign of hypergeometric motives is sometimes wrong > af8bf5ead8 Trac #28400: fixing a few roles > 1cdf4955c6 Trac #28398: _richcmp_ for quaternion algebra elements > abb2397287 Trac #28397: fix some wrong doctests that were not run > 2465a9e494 Trac #28396: faster Möbius matrix for Hasse diagrams > 4b4b5bf81b Trac #28395: Bug in is_weil_polynomial > 77466c5716 Trac #28393: add self-tests for polymake > a7f0a353e5 Trac #28391: dependencies file for jupymake > e7a3ec0d98 Trac #28377: polymake interface broken with "non-standard" > quadratic fields > a535670711 Trac #28339: Random failure in src/sage/interfaces/expect.py > f34f77e4da Trac #28271: Implement LexM traversal > 304feb1626 Trac #28229: Generalized shifted prime tableau > e570374675 Trac #27689: Implement is_pyramid, is_bipyramid, is_prism for > polytopes > addde7bcc7 Trac #28380: bump up the version of givaro in spkg-configure.m4 > 8f1c30f031 Trac #28403: py3: crypto/block_cipher/present.py doctest > failures > 0ae7ffa669 Trac #25727: Prevent giac from giving localized output > 109c1bd6c1 Trac #28060: Extensions of finite fields embeddings: we have > inverse image but `inverse_image` throws `NotImplemented` > 0c5c45c0cf Trac #27937: Fix for functorial construction of monoid algebras > fee35bf412 Trac #27851: Convert sqrt(D) to UCF > 3b7ef2c62c Trac #27831: Small fix for is_symmetric for matrices over CDF > 8f76f4d242 Trac #27760: Generalized Permutohedra and type H4 4-uniform > polytopes > 67de66d92d Trac #27096: Bug in Buchberger algorithm over Tate algebra > 6b8839d39f Trac #25823: maxima segfaults on integral computation > 4583b4056e (tag: 8.9.beta8, trac/develop) Updated SageMath version to > 8.9.beta8 > > -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/78651b01-df14-4f2f-826c-d7de01833101%40googlegroups.com.
