Re: [Cdk-user] CDK in PyCharm IDE

2020-07-05 Thread John Mayfield
Hi Stuart, Sorry for the late reply Finally, while I was hoping it would easy to use CDK right in > PyCharm/Python I now see that I will have to install it separately and use > the command line. > I guess I don’t know, is there command line functionality built into the > CDK jar file? You

Re: [Cdk-user] VolSurf-like molecular descriptors

2020-07-05 Thread Egon Willighagen
Dear Fleming, while the methods are different, the CDK does have descriptors for some of the properties you mention. Some are based on the 3D structure, but not all. When it comes to interactions, less so. The CDK does not have a lot of functionality to calculate or map properties onto the