Bug#867017: src:python-pysam: FTBFS during rebuild for python3.6 transition

2017-07-29 Thread Andreas Tille
Hi Steve, thanks a lot for your investigations. I just uploaded. Kind regards Andreas. On Fri, Jul 28, 2017 at 11:37:38PM -0700, Steve Langasek wrote: > > Well, and one more. This package now built fine, but the autopkgtests ... -- http://fam-tille.de

Bug#867017: src:python-pysam: FTBFS during rebuild for python3.6 transition

2017-07-29 Thread Steve Langasek
On Fri, Jul 28, 2017 at 01:37:54PM -0700, Steve Langasek wrote: > One additional patch required: the previous version built fine locally in a > terminal, but when dispatched to a builder, the build failed because the > test suite is testing functions that only output anything when stdin is a >

Bug#867017: src:python-pysam: FTBFS during rebuild for python3.6 transition

2017-07-28 Thread Steve Langasek
One additional patch required: the previous version built fine locally in a terminal, but when dispatched to a builder, the build failed because the test suite is testing functions that only output anything when stdin is a tty. Since this is clearly deliberate behavior in the code, I'm updating

Bug#867017: src:python-pysam: FTBFS during rebuild for python3.6 transition

2017-07-28 Thread Steve Langasek
Package: python-pysam Version: 0.10.0+ds-2 Followup-For: Bug #867017 User: ubuntu-de...@lists.ubuntu.com Usertags: origin-ubuntu artful ubuntu-patch Hi folks, I've looked into updating python-pysam to the new upstream version to correct the issue with htslib 1.4 compatibility. The existing

Bug#867017: src:python-pysam: FTBFS during rebuild for python3.6 transition

2017-07-03 Thread Scott Kitterman
Package: src:python-pysam Version: 0.10.0+ds-2 Severity: serious Justification: fails to build from source (but built successfully in the past) Although unrelated to the transition (the build failed in the python2.7 part), see below, python-pysam is now failing to build on all archs tried so far.