Re: Tool to build Debian packages not requiring root in containers ?

t from the Release team. (And to rebuild all of them if in the meantime the contents of Unstable have changed significantly). Have a nice day, Charles -- Charles Plessy Nagahama, Yomitan, Okinawa, Japan Debian Med packaging team http://www.debian.org/devel/debia

Tool to build Debian packages not requiring root in containers ?

the package ? Have a nice day, Charles -- Charles Plessy Nagahama, Yomitan, Okinawa, Japan Debian Med packaging team http://www.debian.org/devel/debian-med Tooting from work, https://fediscience.org/@charles_plessy Tooting from home, https

Re: Can we distribute pre-built locales to speed up image generation?

Le Tue, Aug 01, 2023 at 03:18:18PM +0530, Nilesh Patra a écrit : > > https://micronews.debian.org/2023/1686751737.html Thanks ! I was using sid but just switched to fasttrack thanks to your message. Cheers, -- Charles

Re: Can we distribute pre-built locales to speed up image generation?

Le Tue, Aug 01, 2023 at 11:56:28AM +0200, PICCA Frederic-Emmanuel a écrit : > > I sthere a maliling list where we can speak about these singuarity/apptainer > applications ? I wouln't mind debian-hpc@l.d.o, but I do not know about the opinion of the other subscribers? Cheers, --

[solved] Re: Can we distribute pre-built locales to speed up image generation?

t; locales-all has Installed-Size: 227M, I don't know why that differs so > much from your estimate. I was reporting the size of the Singularity image, which must be compressed in some way. A minimal image containing the hello package and locales-all is ~90M. Cheers, Charle

Can we distribute pre-built locales to speed up image generation?

to provide pre-built locales again, either in a separate package or in one of the system images that we distribute, in the interest of embracing language diversity. It has been a long time I have not posted here, and I am not subscribed at the moment. Please CC me! Have a nice day, Charles -- Charles

Re: Firmware GR result - what happens next?

-firmware' at the same time for a release or two ? Cheers, -- Charles Plessy Nagahama, Yomitan, Okinawa, Japan Tooting from work, https://mastodon.technology/@charles_plessy Tooting from home, https://framapiaf.org/@charles_plessy

Re: faciliter la contribution ?

> > > on peut envoyer le rapport directement par email en utilisant des > > pseudo en-têtes. Le Sat, Apr 02, 2022 at 03:38:09PM +0200, Marc Chantreux a écrit : > > c'est ok de faire des tests? y'a quelqu'un a prévenir ? Je je connais pas de moyen de faire de tests. Mais tu peux ouvrir un bug

Re: faciliter la contribution ?

itement. C'est pour ça que j'utilise reportbug, qui permet d'envoyer le rapport via le serveur SMTP dédié de Debian (reportbug.debian.org, ouvert à tous les utilisateurs). Bon week-end, Charles -- Charles Plessy Nagahama, Yomitan, Okinawa, Japan Debian Med

text/javascript to replace application/javascript

-- Charles Plessy Nagahama, Yomitan, Okinawa, Japan Tooting from work, https://mastodon.technology/@charles_plessy Tooting from home, https://framapiaf.org/@charles_plessy signature.asc Description: PGP signature

Is /etc/mime.types used for anything else than associating file suffixes and media types ?

that half of its contents, and the updates to it, may be not useful. I am curious if some of you know other uses of this file. Have a nice day, Charles (maintainer of the `media-types` and `mailcap` packages) -- Charles Plessy Nagahama, Yomitan, Okinawa, Japan Tooting

Alternative aliases for print, see, edit and compose ?

their own alternatives ? - Are there objections ? - What would be the interface ? For the `open` command, the interface is minimal: the file to open as argument, and the rest is unspecified. Have a nice day, Charles -- Charles Plessy Nagahama, Yomitan

Another big update of /etc/mime.types

ded model/vnd.pytha.pyox with only pyox file extensio because pyo is used by Python. -- Charles Plessy Sun, 23 Jan 2022 18:34:58 +0900 -- Charles Plessy Nagahama, Yomitan, Okinawa, Japan Debian Med packaging team http://www.debian.org/devel/debian-

mime.types vs mime/globs (was Re: Shall we serve scripts as application or as text?)

ypes. If you write an application for a system where you can be sure that this information is available, use it ! Cheers, Charles -- Charles Plessy Nagahama, Yomitan, Okinawa, Japan Tooting from work, https://mastodon.technology/@charles_plessy Tooti

Shall we serve scripts as application or as text?

to hear if some of you see a potential problem with that. Have a nice Sunday! Charles -- Charles Plessy Nagahama, Yomitan, Okinawa, Japan Tooting from work, https://mastodon.technology/@charles_plessy Tooting from home, https://framapiaf.org

Re: Added hundreds of media types to /etc/mime.types

file with upper-case file extension, so I think that their presence is not a regression, although I agree that it might be a problem. I propose to resolve that in the next release. Have a nice day, Charles -- Charles Plessy Nagahama, Yomitan, Okinawa, Japan Debian Med

Re: Added hundreds of media types to /etc/mime.types

at the best solution is to implement a choice in this script. If this is too close to the freeze, I can temporarly remove `sdf` for `application/vnd.stardivision.math` and re-add it later. Have a nice day, Charles -- Charles Plessy Nagahama, Yomitan, Okinawa, Japan Tooting from

Added hundreds of media types to /etc/mime.types

deprecated mime types in favor of the IANA-registered version. In case of problems, please feel free to ask me to comment some lines or NMU if you feel some urgency. Have a nice day, Charles -- Charles Plessy Nagahama, Yomitan, Okinawa, Japan Debian Med packaging team

/usr/bin/open now in use through the alternatives system.

a specific one. Given the lack of answer to my previous email (quoted below), I have not implemented URL support in /usr/bin/run-mailcap. > Le Sat, Oct 10, 2020 at 04:27:17AM +0900, Charles Plessy a écrit : > > > > May I ask you for extra information on how important is it to s

Please test the split of mime-support into media-types and mailcap, in Experimental now.

by testing the packages in Experimental before I upload them to Unstable in a week or two. Have a nice day, -- Charles Plessy Nagahama, Yomitan, Okinawa, Japan Tooting from work, https://mastodon.technology/@charles_plessy Tooting from home, https

Re: Proposal: use /usr/bin/open as an alternative for run-mailcap and others.

Le Sat, Oct 10, 2020 at 04:27:17AM +0900, Charles Plessy a écrit : > > May I ask you for extra information on how important is it to support > URLs, and if anything beyond file:/, http:// and https:// would need > to be supported ? ... > Also, can you give me a pointer to an expl

Re: Proposal: use /usr/bin/open as an alternative for run-mailcap and others.

Thanks you Simon, Jérémie and everybody for your feedback. > On Thu, 08 Oct 2020 at 05:54:27 +0900, Charles Plessy wrote: > > /bin/open has been kindly freed a couple years ago (#732796) and I would > > like to propose to repurpose it as a standard command for opening files, >

Proposal: use /usr/bin/open as an alternative for run-mailcap and others.

t; of /usr/bin/open as having a single argument only, which is a path to a file or a directory. This would give the opportunity for other packages such as xdg-utils to provide /usr/bin/open if they wish so. I welcome your comments; please CC me as I am not subscribed. Have a nice day, Charles -

Splitting mime-support into mailcap and media-types (Re: Bug#964850: ITP: mailcap -- Debian's mailcap system, and support programs)

Le Sat, Jul 11, 2020 at 01:48:55PM +0900, Charles Plessy a écrit : > > I plan to split the mime-support package into "mailcap" (this WNPP bug) > that will provide the mailcap system, optionally, and "media-types" > (ITP later), which will provide /etc/mime.types (P

Bug#964850: ITP: mailcap -- Debian's mailcap system, and support programs

Package: wnpp Severity: wishlist Owner: Charles Plessy * Package name: mailcap Version : 3.65 Upstream Author : the authors of the current mime-support package * URL : Will be hosted on Salsa * License : Public domain Programming Lang: Perl Description

Accepted r-bioc-iranges 2.20.1-2 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Fri, 17 Jan 2020 04:14:04 +0900 Source: r-bioc-iranges Architecture: source Version: 2.20.1-2 Distribution: unstable Urgency: medium Maintainer: Debian R Packages Maintainers Changed-By: Charles Plessy Changes: r-bioc-iranges

Accepted mime-support 3.64 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sun, 06 Oct 2019 22:11:08 +0900 Source: mime-support Architecture: source Version: 3.64 Distribution: unstable Urgency: medium Maintainer: Mime-Support Packagers Changed-By: Charles Plessy Closes: 939226 939587 Changes: mime

Making mailcap optional ?

a day or two to let your thoughts mature). Have a nice day, Charles -- Charles Plessy Akano, Uruma, Okinawa, Japan

Accepted mime-support 3.63 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sun, 11 Aug 2019 08:53:20 +0900 Source: mime-support Architecture: source Version: 3.63 Distribution: unstable Urgency: medium Maintainer: Mime-Support Packagers Changed-By: Charles Plessy Closes: 783195 803729 927300 931300

Re: tag2upload (git-debpush) service architecture - draft

? Have a nice day, Charles -- Charles Plessy Akano, Uruma, Okinawa, Japan Debian Med packaging team http://www.debian.org/devel/debian-med Tooting from work, https://mastodon.technology/@charles_plessy Tooting from home, https

Accepted bedtools 2.27.1+dfsg-4 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Thu, 14 Feb 2019 22:11:21 +0900 Source: bedtools Binary: bedtools bedtools-test Architecture: source Version: 2.27.1+dfsg-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Charles Plessy

Accepted perlprimer 1.2.4-1 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Wed, 13 Feb 2019 21:28:09 +0900 Source: perlprimer Binary: perlprimer perlprimer-doc Architecture: source Version: 1.2.4-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Charles Plessy

Accepted mime-support 3.62 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sat, 09 Feb 2019 21:32:33 +0900 Source: mime-support Binary: mime-support Architecture: source Version: 3.62 Distribution: unstable Urgency: medium Maintainer: Mime-Support Packagers Changed-By: Charles Plessy Description: mime

Re: Proposal: Repository for fast-paced package backports

sheds") for solving your own problem :) Have a nice day, Charles -- Charles Plessy Tsurumi, Kanagawa, Japan Debian Med packaging team http://www.debian.org/devel/debian-med Tooting from work, https://mastodon.technology/@charles_plessy Tootin

Accepted euca2ools 3.3.1-2 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Mon, 02 Jul 2018 07:35:23 +0900 Source: euca2ools Binary: euca2ools Architecture: source all Version: 3.3.1-2 Distribution: unstable Urgency: medium Maintainer: Debian Cloud team Changed-By: Charles Plessy Description: euca2ools

Accepted mime-support 3.61 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sat, 16 Jun 2018 17:55:26 +0900 Source: mime-support Binary: mime-support Architecture: source all Version: 3.61 Distribution: unstable Urgency: medium Maintainer: Mime-Support Packagers Changed-By: Charles Plessy Description

Accepted solvate 1.0-2 (source amd64 all) into unstable, unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sat, 22 Mar 2008 11:32:31 +0900 Source: solvate Binary: solvate solvate-doc Architecture: source amd64 all Version: 1.0-2 Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team Changed-By: Charles Plessy

Accepted libtfbs-perl 0.7.1-1 (source amd64) into unstable

kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: libtfbs-perl - scanning DNA sequence with a position weight matrix Changes: libtfbs-perl (0.7.1-1) unstable; urgency=medium . * New upstream version 0.7.1 * d/copyright, d/watch: Stop repacking upstream sou

Accepted last-align 885-1 (source) into unstable

org> Changed-By: Charles Plessy <ple...@debian.org> Description: last-align - genome-scale comparison of biological sequences Changes: last-align (885-1) unstable; urgency=medium . * New upstream version 885 * debian/rules: re-enable multi-threading. * debian/control: build-depe

Accepted r-cran-pheatmap 1.0.8-2 (source) into unstable

kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: r-cran-pheatmap - GNU R package to create pretty heatmaps Changes: r-cran-pheatmap (1.0.8-2) unstable; urgency=medium . * Team upload. * Rebuild for the r-base-3.4 transition. * Moved packaging fro

Accepted bedtools 2.26.0+dfsg-5 (source) into unstable

kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: bedtools - suite of utilities for comparing genomic features bedtools-test - test data for the bedtools package Closes: 876802 Changes: bedtools (2.26.0+dfsg-5) unstable; urgency=medium

Accepted bedtools 2.26.0+dfsg-4 (source) into unstable

kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: bedtools - suite of utilities for comparing genomic features bedtools-test - test data for the bedtools package Changes: bedtools (2.26.0+dfsg-4) unstable; urgency=medium . [ Andreas Tille ] * Fix

Accepted pvclust 2.0-0-2 (source) into unstable

kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: r-cran-pvclust - Hierarchical Clustering with P-Values via Multiscale Bootstrap Changes: pvclust (2.0-0-2) unstable; urgency=medium . * Team upload * Rebuild for r-api-3.4. * cme fix dpkg-control (VCS fi

Accepted perlprimer 1.2.3-1 (source all) into unstable

kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: perlprimer - Graphical design of primers for PCR perlprimer-doc - Tutorial to perlprimer Closes: 708477 Changes: perlprimer (1.2.3-1) unstable; urgency=medium . 00b28ba New upstream version 1.2.3, clo

Accepted bedtools 2.26.0+dfsg-3 (source) into unstable

kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: bedtools - suite of utilities for comparing genomic features bedtools-test - test data for the bedtools package Closes: 831833 Changes: bedtools (2.26.0+dfsg-3) unstable; urgency=medium .

Accepted euca2ools 3.3.1-1 (source all) into unstable

ain...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: euca2ools - tools for interacting with AWS API-compatible services Closes: 841480 Changes: euca2ools (3.3.1-1) unstable; urgency=medium . d271cb9 Merge tag 'v3.3.1'. Closes: #841480. LP: #1527341. 3f4

Accepted bedtools 2.26.0+dfsg-1 (source amd64 all) into unstable

kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: bedtools - suite of utilities for comparing genomic features bedtools-test - test data for the bedtools package Closes: 805998 Changes: bedtools (2.26.0+dfsg-1) unstable; urgency=medium .

Accepted last-align 746-1 (source amd64) into unstable

kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: last-align - genome-scale comparison of biological sequences Changes: last-align (746-1) unstable; urgency=medium . * New upstream version Checksums-Sha1: e0146cea3fb7c184c7be6abb17630a12d88713e8 1967 last-ali

Accepted samtools 1.3.1-2 (source) into unstable

kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: samtools - processing sequence alignments in SAM and BAM formats samtools-test - test files for the samtools package Closes: 822701 Changes: samtools (1.3.1-2) unstable; urgency=medium . 952da10 Build-depen

Accepted mime-support 3.60 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sun, 01 May 2016 20:20:22 +0900 Source: mime-support Binary: mime-support Architecture: source Version: 3.60 Distribution: unstable Urgency: medium Maintainer: Mime-Support Maintainers <mime-supp...@plessy.org> Changed-By: C

Accepted samtools 1.3.1-1 (source) into unstable

kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: samtools - processing sequence alignments in SAM and BAM formats samtools-test - test files for the samtools package Changes: samtools (1.3.1-1) unstable; urgency=medium . 0c961b2 Merge tag '1.3.1' into deb

Accepted htslib 1.3.1-1 (source) into unstable

kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: htslib-test - Test data for HTSlib libhts-dev - Development files for the HTSlib libhts1- C library for high-throughput sequencing data formats tabix - generic indexer for TAB-delimited gen

Accepted libbio-samtools-perl 1.43-1 (source amd64) into unstable

ain...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: libbio-samtools-perl - Perl interface to SamTools library for DNA sequencing Changes: libbio-samtools-perl (1.43-1) unstable; urgency=medium . [ Charles Plessy ] dd47de5 Imported Upstream

Re: Debian, les versions et le noyau

i386 linux-image-amd64 | 4.3+70~bpo8+1 | jessie-backports | amd64 linux-image-amd64 | 4.3+70 | stretch | amd64 linux-image-amd64 | 4.3+70 | sid | amd64 Regarde-voir du côté de backports.debian.org. Amicalement, Charles -- Charles Plessy Tsurumi, Kanagawa, Japan

Re: AppStream / DEP-11 support now available in the Debian archive

Hi Matthias, congratulation for this release ! In the upstream-metadata project (https://wiki.debian.org/UpstreamMetadata) we document some information, some of which is redundant with what is now found in AppStream, and some of which is not. For example, we document bibliographic reference to

Re: tracker.debian.org replaces packages.qa.debian.org for email subscriptions

(Please Cc me; I am not subscribed to -devel currently.) Charles -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan

Accepted staden-io-lib 1.14.3-1 (source amd64 all) into unstable

Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: libstaden-read-dev - development files for libstaden-read libstaden-read11 - Staden library for reading and writing DNA sequencing result

Accepted transrate-tools 1.0.0-1 (source amd64) into unstable, unstable

kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: transrate-tools - helper for transrate Closes: 800412 Changes: transrate-tools (1.0.0-1) unstable; urgency=low . * Team upload. . [ Michael R. Crusoe ] * Initial release (Closes: #800412) Ch

Accepted libmath-random-perl 0.72-1 (source amd64) into unstable

ain...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: libmath-random-perl - Perl collection of random number generators Changes: libmath-random-perl (0.72-1) unstable; urgency=medium . * New upstream release. . [ Salvatore Bonaccorso ] * Update Vcs

Accepted samtools 1.2-2 (source all amd64) into unstable

kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: samtools - processing sequence alignments in SAM and BAM formats samtools-test - test files for the samtools package. Changes: samtools (1.2-2) unstable; urgency=medium . [ Afif Elghraoui ] eb569

Accepted bedtools 2.25.0-1 (source all amd64) into unstable

kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: bedtools - suite of utilities for comparing genomic features bedtools-test - test data for the bedtools package Changes: bedtools (2.25.0-1) unstable; urgency=medium . e37865 Merge tag 'v2.25.0'

Accepted mime-support 3.59 (source all) into unstable

-By: Charles Plessy ple...@debian.org Description: mime-support - MIME files 'mime.types' 'mailcap', and support programs Closes: 774303 776939 787459 793705 Changes: mime-support (3.59) unstable; urgency=medium . * Media types bdfd714 Add media types and extensions to support ClickOnce apps

Accepted bwa 0.7.12-2 (source amd64) into unstable

-By: Charles Plessy ple...@debian.org Description: bwa- Burrows-Wheeler Aligner Changes: bwa (0.7.12-2) unstable; urgency=medium . * Upload to Unstable. * Install bash completion script in /usr/share/bash-completion/completions. * Also distribute README-alt.md. * Watch GitHub

Accepted bioperl-run 1.6.9-3 (source all) into unstable

...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: bioperl-run - BioPerl wrappers: scripts libbio-perl-run-perl - BioPerl wrappers: modules Closes: 78 Changes: bioperl-run (1.6.9-3) unstable; urgency=medium . [ Charles Plessy ] * Build-depend

Accepted libbio-samtools-perl 1.41-1 (source amd64) into unstable

...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: libbio-samtools-perl - Perl interface to SamTools library for DNA sequencing Changes: libbio-samtools-perl (1.41-1) unstable; urgency=medium . 0b7140a Imported Upstream version 1.41 Checksums-Sha1

Accepted samtools 1.2-1 (source all amd64) into unstable

...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: samtools - processing sequence alignments in SAM and BAM formats samtools-test - test files for the samtools package. Changes: samtools (1.2-1) unstable; urgency=medium . a5f28a0 Merge tag '1.2' into debian/unstable

Re: Bug#787571: How about transferring /etc/mime.types from mime-support to base-files.

Le Wed, Jun 03, 2015 at 01:04:26AM +0200, Santiago Vila a écrit : To summarize: Because this would imply a change in the essentialness of the file, I don't think it would be a good idea. Thanks for the quick and precise answer. I agree. Have a nice day, Charles -- Charles Plessy Tsurumi

Bug#787571: How about transferring /etc/mime.types from mime-support to base-files.

://bugs.debian.org/786889. Alternatively, we could ship this file in base-files, since it is among these traditional Unix files that one always expects to be available. But it has frequent updates, to it may be extra work for you. What do you think about this ? Have a nice day, -- Charles Plessy

Accepted r-cran-rcurl 1.95-4.3-2 (source amd64) into unstable

...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: r-cran-rcurl - GNU R General network (HTTP/FTP/...) client interface Closes: 786473 Changes: r-cran-rcurl (1.95-4.3-2) unstable; urgency=medium . * Team upload. * Build-Depend on libcurl4-openssl-dev only (Closes

Accepted odt2txt 0.5-1 (source amd64) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sun, 31 May 2015 09:52:44 +0900 Source: odt2txt Binary: odt2txt Architecture: source amd64 Version: 0.5-1 Distribution: unstable Urgency: medium Maintainer: Nelson A. de Oliveira nao...@debian.org Changed-By: Charles Plessy ple

Bug#786889: ITP: media-types -- List of media types associated to file suffixes

Package: wnpp Severity: wishlist Owner: Charles Plessy ple...@debian.org Package name: media-types Version : 2.1.44 Upstream Author : Mostly Ville Skyttä ville.sky...@iki.fi, for Fedora URL : https://git.fedorahosted.org/cgit/mailcap.git/tree/mime.types License

Accepted htslib 1.2.1-1 (source all amd64) into unstable

-packag...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: htslib-test - Test data for HTSlib libhts-dev - Development files for the HTSlib libhts1- C library for high-throughput sequencing data formats tabix - generic indexer for TAB-delimited genome

Accepted bowtie 1.1.1-2 (source amd64 all) into unstable

...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: bowtie - Ultrafast memory-efficient short read aligner bowtie-examples - Examples for bowtie, the ultrafast memory-efficient short read al Closes: 776881 Changes: bowtie (1.1.1-2) unstable; urgency=high . * Team

Accepted mime-support 3.58 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sun, 28 Dec 2014 14:45:59 +0900 Source: mime-support Binary: mime-support Architecture: source all Version: 3.58 Distribution: unstable Urgency: high Maintainer: Mime-Support Maintainers mime-supp...@plessy.org Changed-By: Charles

Let's abandon debian-devel.

they have when feasting on debian-devel or debian-vote. Let's make our project stronger by reducing thr attack surface for troublemakers. Cheers, -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-devel

Is it harmless to associate more file extensions to application/octet-stream ?

. With search engines I have not found evidence of a problem, but if you know one, please let me know. Have a nice Sunday, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas

Re: so long and thanks for all the fish

Hi Joey, among all the Debian developers you have been one of the most inspiring to me. I hope that you will keep your blog syndicated on planet.debian.org ! Cheers, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject

Re: dgit and git-dpm

to. Cheers, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org Archive: https://lists.debian.org/20141030032519.gh5...@falafel.plessy.net

Accepted seaview 1:4.5.3.1-2 (source amd64) into unstable

...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: seaview- Multiplatform interface for sequence alignment and phylogeny Closes: 765824 Changes: seaview (1:4.5.3.1-2) unstable; urgency=medium . * Remove unneeded build-dependance on libjpeg8-dev (Closes: #765824). Checksums-Sha1

Re: piece of mind (Re: Moderated posts?)

Le Mon, Oct 13, 2014 at 02:21:45PM +0200, Thorsten Glaser a écrit : … but even then, am drowned by the masses. No, you are drowning the masses under your emails, that is different. -- Charles -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of unsubscribe.

Accepted euca2ools 3.1.0-1 (source all) into unstable

...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: euca2ools - tools for interacting with AWS API-compatible services Closes: 734616 758910 Changes: euca2ools (3.1.0-1) unstable; urgency=medium . 5d9d911 Merge tag 'v3.1.0' into debian/unstable Closes: #734616

Accepted euca2ools 3.2.0~pre1-1 (source all) into experimental

...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: euca2ools - tools for interacting with AWS API-compatible services Changes: euca2ools (3.2.0~pre1-1) experimental; urgency=medium . 493e785 Merged upstream tag v3.2.0-pre1. 3f4b6a5 Depends on python

Re: Fwd: bash exorcism experiment ('bug' 762923 763012)

time to get over. On this mailing list, you went as far as calling for murder, and regularly insulting others. I hope that next time you will get at the very least banned from posting on this list for a few weeks. Cheers, -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel

Accepted odt2txt 0.4+git20140608-1 (source amd64) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sat, 04 Oct 2014 17:21:42 +0900 Source: odt2txt Binary: odt2txt Architecture: source amd64 Version: 0.4+git20140608-1 Distribution: unstable Urgency: medium Maintainer: Nelson A. de Oliveira nao...@debian.org Changed-By: Charles

Accepted mime-support 3.57 (source all) into unstable

-By: Charles Plessy ple...@debian.org Description: mime-support - MIME files 'mime.types' 'mailcap', and support programs Closes: 749771 756754 759746 Changes: mime-support (3.57) unstable; urgency=medium . * Media types added: ef09adf application/x-xz Closes: #756754

Accepted mafft 7.187-1 (source amd64) into unstable

Changed-By: Charles Plessy ple...@debian.org Description: mafft - Multiple alignment program for amino acid or nucleotide sequences Changes: mafft (7.187-1) unstable; urgency=medium . * New upstream release. * Conforms to Policy 3.9.6. Checksums-Sha1

Re: versions / suffixes in experimental

Le Thu, Sep 25, 2014 at 11:15:46AM +0200, Daniel Pocock a écrit : On 25/09/14 10:00, Neil Williams wrote: On Thu, 25 Sep 2014 09:42:42 +0200 Jonas Smedegaard d...@jones.dk wrote: Quoting Daniel Pocock (2014-09-25 09:16:46) I have a package, version 2.2.5-5 in unstable and testing I

Accepted htslib 1.1-1 (source amd64 all) into unstable

-packag...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: htslib-test - Test data for HTSlib libhts-dev - Development files for the HTSlib libhts1- C library for high-throughput sequencing data formats tabix - generic indexer for TAB-delimited genome

Accepted samtools 1.1-1 (source amd64 all) into unstable

...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: samtools - processing sequence alignments in SAM and BAM formats samtools-test - test files for the samtools package. Changes: samtools (1.1-1) unstable; urgency=medium . c448d48 Merge tag '1.1' into debian/unstable

Re: Trimming priority:standard

installed systems where I am sure that I never used hdparm). Anyway, the point I want to make is that we should trust Ralf when he reports that full disk load slows his machine despite cron jobs using ionice, although this is probably a corner case. Have a nice day, -- Charles Plessy Tsurumi

Accepted bedtools 2.21.0-1 (source amd64 all) into unstable

...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: bedtools - suite of utilities for comparing genomic features bedtools-test - test data for the bedtools package Changes: bedtools (2.21.0-1) unstable; urgency=medium . 856a5fd Merge tag 'v2.21.0' into debian

Accepted paraclu 9-1 (source amd64) into unstable, unstable

-By: Charles Plessy ple...@debian.org Description: paraclu- Parametric clustering of genomic and transcriptomic features Closes: 762412 Changes: paraclu (9-1) unstable; urgency=low . * First upload to the Debian archive, closes: #762412. Checksums-Sha1

Accepted wise 2.4.1-17 (source amd64 all) into unstable

...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: wise - comparison of biopolymers, like DNA and protein sequences wise-data - data files for the wise package wise-doc - documentation for the wise package Changes: wise (2.4.1-17) unstable; urgency=medium

Accepted samtools 1.0-1 (source amd64 all) into unstable

...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: samtools - processing sequence alignments in SAM and BAM formats samtools-test - test files for the samtools package. Closes: 544976 Changes: samtools (1.0-1) unstable; urgency=low . [ Charles Plessy ] 54ca0c1 Merge

Bug#762412: ITP: paraclu -- Parametric clustering of genomic and transcriptomic features

Package: wnpp Severity: wishlist Owner: Charles Plessy ple...@debian.org * Package name: paraclu Version : 9 Upstream Author : Martin C. Frith * URL : http://www.cbrc.jp/paraclu/ * License : GPL-3+ Programming Lang: C++ Description : Parametric

Accepted seaview 1:4.5.2-1 (source amd64) into unstable

...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: seaview- Multiplatform interface for sequence alignment and phylogeny Changes: seaview (1:4.5.2-1) unstable; urgency=medium . * New upstream version. * New homepage. Checksums-Sha1: b9e006bc1677bcb30ea9af5efc0efe28541eb001

Accepted samtools-legacy 0.1.19-2 (source amd64) into unstable, unstable

...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: libbam-dev - manipulates nucleotide sequence alignments in BAM or SAM format Changes: samtools-legacy (0.1.19-2) unstable; urgency=medium . 1bb181e Build libbam-dev from version 0.1.19 in a “legacy” source package. Checksums

Accepted htslib 1.0-2 (source amd64 all) into unstable

-packag...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: htslib-test - Test data for HTSlib libhts-dev - Development files for the HTSlib libhts1- C library for high-throughput sequencing data formats tabix - generic indexer for TAB-delimited genome

Re: 2 months and no upload for pkg

licenses to the queue, and transferring the checks for DFSG compliance (missing source files, non-free licenses, ...) and quality in general to another stage of package production. Have a nice week-end, -- Charles Plessy -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org

Re: Possible abuse of dpkg-deb -z9 for xz compressed binary packages

Le Fri, Sep 05, 2014 at 11:13:40AM +0200, Thorsten Glaser a écrit : So please, do not outright dismiss scenarios you personally cannot imagine. Please consider that your comments on the limited imagination of others can be felt as deliberately offensive. Cheers, -- Charles Plessy

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