Re: Should singularity-container make it to next release?

Le mer. 12 oct. 2022 à 18:08, Nilesh Patra a écrit : > Hi, > > src:singularity-container was lying around in a bad shape for several years > and had missed 2 debian releases until me and Andreas picked it up again. > It is currently in a reasonably good condition. I was excited to have it in >

Re: Free open-source ONLYOFFICE Desktop Editors: Compile from source code for Debian repository

Le mar. 19 mai 2020 à 16:48, Kseniya Fedoruk a écrit : > Hi team, > > I'm Kseniya from ONLYOFFICE. We are developing open-source office > applications, including the absolutely free ONLYOFFICE Desktop Editors that > provide alternatives to MS Office Word, Excel, and PowerPoint distributed >

Accepted libchado-perl 1.31-6 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 05 Dec 2019 08:35:16 + Source: libchado-perl Architecture: source Version: 1.31-6 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou Closes: 939832 Changes: libchado

Accepted biomaj3-download 3.1.0-1 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 12 Nov 2019 10:18:15 + Source: biomaj3-download Architecture: source Version: 3.1.0-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou Changes: biomaj3-download

Accepted biomaj3 3.1.14-1 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 12 Nov 2019 10:29:09 + Source: biomaj3 Architecture: source Version: 3.1.14-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou Changes: biomaj3 (3.1.14-1) unstable

Accepted biomaj3-process 3.0.15-1 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 12 Nov 2019 10:32:06 + Source: biomaj3-process Architecture: source Version: 3.0.15-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou Changes: biomaj3-process

Accepted biomaj3-user 3.0.10-1 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 12 Nov 2019 10:30:39 + Source: biomaj3-user Architecture: source Version: 3.0.10-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou Changes: biomaj3-user (3.0.10-1

Accepted biomaj3-cli 3.1.11-1 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 12 Nov 2019 10:37:31 + Source: biomaj3-cli Architecture: source Version: 3.1.11-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou Changes: biomaj3-cli (3.1.11-1

Accepted biomaj3-core 3.0.19-1 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Wed, 16 Oct 2019 13:14:38 + Source: biomaj3-core Architecture: source Version: 3.0.19-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou Changes: biomaj3-core (3.0.19-1

Accepted biomaj3-daemon 3.0.20-1 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 12 Nov 2019 10:34:19 + Source: biomaj3-daemon Architecture: source Version: 3.0.20-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou Changes: biomaj3-daemon

Accepted python-ftputil 3.4-1 (source all) into unstable, unstable

-By: Olivier Sallou Description: python-ftputil - high-level FTP client library for Python python3-ftputil - high-level FTP client library for Python Closes: 933390 Changes: python-ftputil (3.4-1) unstable; urgency=medium . [ Olivier Sallou ] * Debian package, Closes: #933390 Keep python2

Accepted python-easydev 0.9.38-2 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 04 Nov 2019 10:22:25 + Source: python-easydev Architecture: source Version: 0.9.38-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou Closes: 943912 Changes

Accepted python-easydev 0.9.38-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 28 Oct 2019 15:56:52 + Source: python-easydev Binary: python3-easydev Architecture: source all Version: 0.9.38-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou

Accepted ncbi-blast+ 2.9.0-1 (source all amd64) into unstable

Packaging Team Changed-By: Olivier Sallou Description: blast2 - transitional dummy package to ncbi-blast+-legacy ncbi-blast+ - next generation suite of BLAST sequence search tools ncbi-blast+-legacy - NCBI Blast legacy call script Changes: ncbi-blast+ (2.9.0-1) unstable; urgency=medium

Accepted ngs-sdk 2.10.0-1 (source amd64) into unstable

Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou Description: libngs-java - Next Generation Sequencing language Bindings (Java bindings) libngs-sdk-dev - Next Generation Sequencing language Bindings (development) libngs-sdk2 - Next Generation Sequencing language Bindings python-ngs

Accepted gkl 0.8.6+dfsg-1 (source amd64) into unstable

-By: Olivier Sallou Description: libgkl-java - Java library to manipulate SAM and BAM files libgkl-jni - native libraries of Java library to manipulate SAM and BAM files Changes: gkl (0.8.6+dfsg-1) unstable; urgency=medium . * New upstream release Checksums-Sha1

Bug#933390: ITP: python-ftputil -- high level library for python ftp

Package: wnpp Severity: wishlist Owner: Olivier Sallou X-Debbugs-Cc: debian-devel@lists.debian.org, python-modules-t...@lists.alioth.debian.org * Package name: python-ftputil Version : 3.4 Upstream Author : Stefan Schwarzer * URL : https://ftputil.sschwarzer.net/trac

Re: buster backports question/status

Le mer. 10 juil. 2019 à 11:35, Andrey Rahmatullin a écrit : > On Wed, Jul 10, 2019 at 11:29:01AM +0200, olivier sallou wrote: > > I tried a package that is not in backports, it was just for test (for an > > automation tool I use) > > It should fail with a *package no

Re: buster backports question/status

Le mer. 10 juil. 2019 à 11:08, Andrey Rahmatullin a écrit : > On Wed, Jul 10, 2019 at 10:54:21AM +0200, olivier sallou wrote: > > So, am I doing something wrong? > You tried to install a package (what package? they don't exist) from a > repo that doesn't exist. >

buster backports question/status

Hi, it may be a silly question, but doing some tests on a Debian buster, I got errors trying to install a package from buster-backports. I added to sources.list.d info to set buster-backports but i get this error: E: The value 'buster-backports' is invalid for APT::Default-Release as such a

Re: Please help me to create Debian package

Le ven. 5 juil. 2019 à 22:24, himanshu Singh a écrit : > Thanks, > There is a small problem I'm facing is how to handle the installer bash > script? > how can I run it during installation? Its function is to install python > dependencies, > You can't. In packages you specify other debian

Re: Please help me to create Debian package

Le jeu. 4 juil. 2019 à 18:31, Mindaugas Celiesius a écrit : > > > > Hi, I am working on a project named Osdag. It is open-source software > for the design of steel structures. I'm trying to create a Debian package > for it and planning to add to Debian package repository. It would be a > great

Accepted python-irodsclient 0.8.1-1 (source all) into unstable, unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sat, 09 Mar 2019 10:13:09 + Source: python-irodsclient Binary: python3-irodsclient Architecture: source all Version: 0.8.1-1 Distribution: unstable Urgency: medium Maintainer: Debian Python Modules Team Changed-By: Olivier

Accepted cnvkit 0.9.5-3 (source amd64) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Wed, 27 Mar 2019 08:00:39 + Source: cnvkit Binary: cnvkit Architecture: source amd64 Version: 0.9.5-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou Description

Accepted biomaj3-daemon 3.0.19-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sat, 09 Mar 2019 10:23:28 + Source: biomaj3-daemon Binary: python3-biomaj3-daemon Architecture: source all Version: 3.0.19-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier

Accepted biomaj3 3.1.8-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sat, 09 Mar 2019 10:18:52 + Source: biomaj3 Binary: python3-biomaj3 Architecture: source all Version: 3.1.8-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou

Accepted biomaj3-process 3.0.13-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sat, 09 Mar 2019 10:13:09 + Source: biomaj3-process Binary: python3-biomaj3-process Architecture: source all Version: 3.0.13-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier

Accepted biomaj3-download 3.0.21-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sat, 09 Mar 2019 09:48:16 + Source: biomaj3-download Binary: python3-biomaj3-download Architecture: source all Version: 3.0.21-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier

Accepted biomaj3-user 3.0.8-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sat, 09 Mar 2019 08:14:41 + Source: biomaj3-user Binary: python3-biomaj3-user Architecture: source all Version: 3.0.8-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou

Accepted biomaj3-core 3.0.16-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sat, 09 Mar 2019 07:56:51 + Source: biomaj3-core Binary: python3-biomaj3-core Architecture: source all Version: 3.0.16-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou

Accepted biomaj3-core 3.0.15-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 19 Feb 2019 15:28:26 + Source: biomaj3-core Binary: python3-biomaj3-core Architecture: source all Version: 3.0.15-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou

Accepted picard-tools 2.18.25+dfsg-1 (source all) into unstable

Team Changed-By: Olivier Sallou Description: libpicard-java - Java library to manipulate SAM and BAM files libpicard-java-doc - Documentation for the java picard library picard-tools - Command line tools to manipulate SAM and BAM files Changes: picard-tools (2.18.25+dfsg-1) unstable; urgency

Accepted picard-tools 2.18.23+dfsg-2 (source all) into unstable

Team Changed-By: Olivier Sallou Description: libpicard-java - Java library to manipulate SAM and BAM files libpicard-java-doc - Documentation for the java picard library picard-tools - Command line tools to manipulate SAM and BAM files Closes: 919559 Changes: picard-tools (2.18.23+dfsg-2

Accepted gkl 0.8.5+dfsg-2 (source amd64) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 17 Jan 2019 11:12:57 + Source: gkl Binary: libgkl-java libgkl-jni Architecture: source amd64 Version: 0.8.5+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Java Maintainers Changed-By: Olivier Sallou

Accepted barclay 2.1.0-3 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 17 Jan 2019 09:37:52 + Source: barclay Binary: libbarclay-java Architecture: source all Version: 2.1.0-3 Distribution: unstable Urgency: medium Maintainer: Debian Java Maintainers Changed-By: Olivier Sallou Description

Accepted htsjdk 2.16.1+dfsg-3 (source all) into unstable

-By: Olivier Sallou Description: libhtsjdk-java - Java API for high-throughput sequencing data (HTS) formats libhtsjdk-java-doc - Documentation for the java HTSJDK library Closes: 913839 Changes: htsjdk (2.16.1+dfsg-3) unstable; urgency=medium . * Fix FTBS on debian test servers due to ip/name

Accepted htsjdk 2.16.1+dfsg-2 (source all) into unstable

-By: Olivier Sallou Description: libhtsjdk-java - Java API for high-throughput sequencing data (HTS) formats libhtsjdk-java-doc - Documentation for the java HTSJDK library Closes: 913566 Changes: htsjdk (2.16.1+dfsg-2) unstable; urgency=medium . * Fix FTBS with OpenJDK 11 (Closes: #913566) Checksums

Accepted igv 2.4.14+dfsg-2 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 23 Oct 2018 14:55:18 +0200 Source: igv Binary: igv Architecture: source all Version: 2.4.14+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou Description: igv

Accepted rdp-readseq 2.0.2-6 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 08 Nov 2018 11:00:18 + Source: rdp-readseq Binary: rdp-readseq Architecture: source all Version: 2.0.2-6 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou

Accepted rdp-classifier 2.10.2-4 (source all) into unstable

-By: Olivier Sallou Description: rdp-classifier - extensible sequence classifier for fungal lsu, bacterial and arch rdp-classifier-doc - documentation and examples for rdp-classifier Changes: rdp-classifier (2.10.2-4) unstable; urgency=medium . * Fix openjdk 11 FTBS (java.se.ee deprecated in jdk

Accepted rdp-readseq 2.0.2-5 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 05 Nov 2018 09:05:50 + Source: rdp-readseq Binary: rdp-readseq Architecture: source all Version: 2.0.2-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou

Accepted rdp-alignment 1.2.0-5 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 05 Nov 2018 08:46:01 + Source: rdp-alignment Binary: rdp-alignment Architecture: source all Version: 1.2.0-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou

Accepted python-py-zipkin 0.15.0-1 (source all) into unstable

Sallou Description: python3-py-zipkin - Library for using Zipkin in Python Changes: python-py-zipkin (0.15.0-1) unstable; urgency=medium . [ Ondřej Nový ] * d/control: Set Vcs-* to salsa.debian.org * d/copyright: Use https protocol in Format field . [ Olivier Sallou ] * New upstream

Accepted biomaj3-daemon 3.0.17-1 (source all) into unstable

Sallou Description: python3-biomaj3-daemon - BioMAJ daemon library Changes: biomaj3-daemon (3.0.17-1) unstable; urgency=medium . [ Jelmer Vernooij ] * Use secure copyright file specification URI. * Trim trailing whitespace. . [ Olivier Sallou ] * New upstream release Checksums-Sha1

Accepted biomaj3-cli 3.1.10-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 25 Oct 2018 09:26:51 + Source: biomaj3-cli Binary: python3-biomaj3-cli Architecture: source all Version: 3.1.10-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou

Accepted biomaj3-process 3.0.11-1 (source all) into unstable

Sallou Description: python3-biomaj3-process - BioMAJ process management library Changes: biomaj3-process (3.0.11-1) unstable; urgency=medium . [ Jelmer Vernooij ] * Use secure copyright file specification URI. * Trim trailing whitespace. . [ Olivier Sallou ] * New upstream release

Accepted biomaj3-core 3.0.14-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 25 Oct 2018 09:13:09 + Source: biomaj3-core Binary: python3-biomaj3-core Architecture: source all Version: 3.0.14-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou

Accepted biomaj3 3.1.6-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 25 Oct 2018 09:18:06 + Source: biomaj3 Binary: python3-biomaj3 Architecture: source all Version: 3.1.6-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou

Accepted biomaj3-download 3.0.18-1 (source all) into unstable

Sallou Description: python3-biomaj3-download - BioMAJ download management library Changes: biomaj3-download (3.0.18-1) unstable; urgency=medium . [ Jelmer Vernooij ] * Use secure copyright file specification URI. * Trim trailing whitespace. . [ Olivier Sallou ] * New upstream

Accepted cassiopee 1.0.9-1 (source amd64 all) into unstable

Team Changed-By: Olivier Sallou Description: cassiopee - index and search tool in genomic sequences libcassie-dev - library and headers for development libcassie-doc - documentation for cassiopee library libcassie1v5 - library implementating search algorithms Changes: cassiopee (1.0.9-1

Accepted cassiopee 1.0.8-2 (source amd64 all) into unstable

Team Changed-By: Olivier Sallou Description: cassiopee - index and search tool in genomic sequences libcassie-dev - library and headers for development libcassie-doc - documentation for cassiopee library libcassie1v5 - library implementating search algorithms Changes: cassiopee (1.0.8-2

Accepted gatk-native-bindings 1.0.0-2 (source all) into unstable

-By: Olivier Sallou Description: libgatk-native-bindings-java - library for gatk and picard-tools Changes: gatk-native-bindings (1.0.0-2) unstable; urgency=medium . * Upload to unstable * Enable unit tests after jcommander fix Checksums-Sha1: ecbc1aa8770a833269733fb1cc7ff33040baf394 2165 gatk

Accepted barclay 2.1.0-2 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 06 Aug 2018 07:57:44 + Source: barclay Binary: libbarclay-java Architecture: source all Version: 2.1.0-2 Distribution: unstable Urgency: medium Maintainer: Debian Java Maintainers Changed-By: Olivier Sallou Description

Accepted htsjdk 2.14.3+dfsg-3 (source all) into unstable

-By: Olivier Sallou Description: libhtsjdk-java - Java API for high-throughput sequencing data (HTS) formats libhtsjdk-java-doc - Documentation for the java HTSJDK library Changes: htsjdk (2.14.3+dfsg-3) unstable; urgency=medium . * Reintroduce unit tests after jcommander fix Checksums-Sha1

Accepted gkl 0.8.5+dfsg-1 (source all amd64) into unstable, unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 03 May 2018 15:06:19 + Source: gkl Binary: libgkl-java libgkl-jni Architecture: source all amd64 Version: 0.8.5+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Java Maintainers Changed-By: Olivier Sallou

Accepted logol 1.7.8-2 (source amd64 all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Fri, 01 Jun 2018 09:23:38 + Source: logol Binary: logol logol-bin Architecture: source amd64 all Version: 1.7.8-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou

Accepted barclay 2.1.0-1 (source all) into experimental, experimental

ain...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: libbarclay-java - Java library to parse command line Closes: 873847 Changes: barclay (2.1.0-1) experimental; urgency=medium . * New package for barclay (Closes: #873847) Ch

Accepted gatk-native-bindings 1.0.0-1 (source all) into experimental, experimental

ava-maintain...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: libgatk-native-bindings-java - library for gatk and picard-tools Closes: 897610 Changes: gatk-native-bindings (1.0.0-1) experimental; urgency=medium . [ Olivier Sallou ] * New pac

Re: Please do not drop Python 2 modules

Le mer. 25 avr. 2018 01:54, Nicholas D Steeves a écrit : > On Tue, Apr 24, 2018 at 12:29:54AM +0200, Thomas Goirand wrote: > > On 04/21/2018 11:19 PM, Scott Kitterman wrote: > > > Since we are supporting Python2 in the next release, there is no > value> in dumping python-*

Re: Please do not drop Python 2 modules

Le sam. 21 avr. 2018 20:04, Chris Lamb a écrit : > Adrian Bunk wrote: > > > The tip of the iceberg are some recent cases where Python 2 modules > > were dropped that still had reverse dependencies in unstable > > I suspect developers may be reading too much into Lintian output,

Accepted cassiopee 1.0.8-1 (source amd64 all) into unstable

Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: cassiopee - index and search tool in genomic sequences libcassie-dev - library and headers for development libcassie-doc - documentation for cassiopee library libcassie1

Accepted logol 1.7.8-1 (source amd64 all) into unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: logol - Pattern matching tool using Logol language logol-bin - Pattern matching tool using Logol language Changes: logol (1.7.8-1) unstable; urgency=medium . * New upstream release (bug fixes) Ch

Accepted ncbi-blast+ 2.7.1-1 (source all amd64) into unstable

ian-med-packag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: blast2 - transitional dummy package to ncbi-blast+-legacy ncbi-blast+ - next generation suite of BLAST sequence search tools ncbi-blast+-legacy - NCBI Blast legacy call script Ch

Accepted biomaj3-core 3.0.11-2 (source all) into unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: python3-biomaj3-core - BioMAJ core library - Python 3.X Closes: 890123 Changes: biomaj3-core (3.0.11-2) unstable; urgency=medium . * Add missing build-dep (Closes: #890123). Ch

Accepted biojava4-live 4.2.11+dfsg-1 (source all) into unstable

Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: libbiojava4-java - Java API to biological data and applications (default version) libbiojava4-java-doc - [Biology] Documentation for BioJava libbiojava4.0-jav

Accepted biomaj3-cli 3.1.9-1 (source all) into unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: python3-biomaj3-cli - BioMAJ client Changes: biomaj3-cli (3.1.9-1) unstable; urgency=medium . * New upstream release d/control: switch to 4.1.3 Checksums-Sha1: e12a0fed70e40d5059644cf95fe1290c7

Accepted biomaj3-daemon 3.0.14-1 (source all) into unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: python3-biomaj3-daemon - BioMAJ daemon library Changes: biomaj3-daemon (3.0.14-1) unstable; urgency=medium . * New upstream release d/control: move to standards 4.1.3 Ch

Accepted biomaj3-download 3.0.14-1 (source all) into unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: python3-biomaj3-download - BioMAJ download management library Changes: biomaj3-download (3.0.14-1) unstable; urgency=medium . * New upstream release d/control: switch to standards 4.1.3 Ch

Accepted biomaj3-core 3.0.11-1 (source all) into unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: python3-biomaj3-core - BioMAJ core library - Python 3.X Changes: biomaj3-core (3.0.11-1) unstable; urgency=medium . * New upstream release d/control: switch to standards 4.1.3 Ch

Accepted biomaj3-process 3.0.10-1 (source all) into unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: python3-biomaj3-process - BioMAJ process management library Changes: biomaj3-process (3.0.10-1) unstable; urgency=medium . * New upstream release d/control: switch to 4.1.3 Ch

Accepted cassiopee 1.0.7-1 (source amd64 all) into unstable

Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: cassiopee - index and search tool in genomic sequences libcassie-dev - library and headers for development libcassie-doc - documentation for cassiopee library libcassie1

Accepted logol 1.7.7-1 (source amd64 all) into unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: logol - Pattern matching tool using Logol language logol-bin - Pattern matching tool using Logol language Changes: logol (1.7.7-1) unstable; urgency=medium . * New upstream release (bug fixes) Ch

Accepted logol 1.7.6-1 (source amd64 all) into unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: logol - Pattern matching tool using Logol language logol-bin - Pattern matching tool using Logol language Changes: logol (1.7.6-1) unstable; urgency=medium . * New upstream release Ch

Accepted visp-images 3.1.0-1 (source all) into unstable

ain...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: visp-images-data - visual servoing library - dataset reference files Changes: visp-images (3.1.0-1) unstable; urgency=medium . * Update debian policy to the latest 4.1.1 * Set priority as optiona

Accepted biomaj3-daemon 3.0.12-1 (source all) into unstable, unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: python3-biomaj3-daemon - BioMAJ daemon library Closes: 872449 Changes: biomaj3-daemon (3.0.12-1) unstable; urgency=low . * First packaging of biomaj-daemon (Closes: #872449). Ch

Accepted biomaj3-user 3.0.6-1 (source all) into unstable, unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: python3-biomaj3-user - BioMAJ user management library Closes: 872445 Changes: biomaj3-user (3.0.6-1) unstable; urgency=low . * First packaging of biomaj-user (Closes: #872445). Ch

Accepted biomaj3-download 3.0.13-1 (source all) into unstable, unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: python3-biomaj3-download - BioMAJ download management library Closes: 872446 Changes: biomaj3-download (3.0.13-1) unstable; urgency=low . * First packaging of biomaj-download (Closes: #872446). Ch

Accepted biomaj3-process 3.0.8-1 (source all) into unstable, unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: python3-biomaj3-process - BioMAJ process management library Closes: 872447 Changes: biomaj3-process (3.0.8-1) unstable; urgency=low . * First packaging of biomaj-process (Closes: #872447) Ch

Accepted biomaj3-core 3.0.9-1 (source all) into unstable, unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: python3-biomaj3-core - BioMAJ core library - Python 3.X Closes: 872409 Changes: biomaj3-core (3.0.9-1) unstable; urgency=low . * First packaging of biomaj-core (Closes: #872409). Ch

Accepted biomaj3 3.1.3-1 (source all) into unstable, unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: python3-biomaj3 - BioMAJ workflow management library Closes: 872451 Changes: biomaj3 (3.1.3-1) unstable; urgency=low . * First packaging of biomaj (Closes: #872451). Checksums-Sha1: a62c5f84fca6ade608a7973ee2fb021cd

Accepted biomaj3-cli 3.1.7-1 (source all) into unstable, unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: python3-biomaj3-cli - BioMAJ client Closes: 872450 Changes: biomaj3-cli (3.1.7-1) unstable; urgency=low . * First packaging of biomaj-cli (Closes: #872450). Checksums-Sha1: 40f0471d670ee4886c71375418dd35f91

Accepted biomaj3-zipkin 0.2.2-1 (source all) into unstable, unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: python3-biomaj3-zipkin - BioMAJ zipkin log tracing library Closes: 872444 Changes: biomaj3-zipkin (0.2.2-1) unstable; urgency=low . * First packaging of biomaj-zipkin (Closes: #872444). Ch

Accepted htsjdk 2.8.1+dfsg-2 (source all) into unstable

med-packag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: libhtsjdk-java - Java API for high-throughput sequencing data (HTS) formats libhtsjdk-java-doc - Documentation for the java HTSJDK library Changes: htsjdk (2.8.1+dfsg-2) unstable; urgency=medi

Accepted rdp-classifier 2.10.2-2 (source all) into unstable

med-packag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: rdp-classifier - extensible sequence classifier for fungal lsu, bacterial and arch rdp-classifier-doc - documentation and examples for rdp-classifier Closes: 875789 Changes: rdp-classifi

Accepted biojava4-live 4.2.7+dfsg-2 (source all) into unstable

Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: libbiojava4-java - Java API to biological data and applications (default version) libbiojava4-java-doc - [Biology] Documentation for BioJava libbiojava4.0-jav

Accepted python-py-zipkin 0.9.0-2 (source all) into unstable

s-t...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: python3-py-zipkin - Library for using Zipkin in Python Closes: 873654 Changes: python-py-zipkin (0.9.0-2) unstable; urgency=medium . * d/control: fix maintainers to set python module team

Accepted python-thriftpy 0.3.9-1 (source amd64) into unstable, unstable

s-t...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: python3-thriftpy - Pure Python implementation of Apache Thrift Closes: 872343 Changes: python-thriftpy (0.3.9-1) unstable; urgency=low . * First packaging of thriftpy module (Closes: #872343). Ch

Accepted python-py-zipkin 0.9.0-1 (source all) into unstable, unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Wed, 16 Aug 2017 12:51:25 + Source: python-py-zipkin Binary: python3-py-zipkin Architecture: source all Version: 0.9.0-1 Distribution: unstable Urgency: low Maintainer: Olivier Sallou <osal...@debian.org> Changed-By: O

Accepted python-consul 0.7.1-1 (source all) into unstable, unstable

s-t...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: python3-consul - Python client for Consul.io - Python 3.X Closes: 826550 Changes: python-consul (0.7.1-1) unstable; urgency=low . * First packaging of python-consul (Closes: #826550). Ch

Accepted biomaj-watcher 1.2.2-5 (source all) into unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: biomaj-watcher - biological data-bank updater - web interface Closes: 866066 Changes: biomaj-watcher (1.2.2-5) unstable; urgency=medium . * Team upload. * Add slf4j libraries required by libquartz-java t

Accepted bedops 2.4.26+dfsg-1 (source amd64) into unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: bedops - high-performance genomic feature operations Changes: bedops (2.4.26+dfsg-1) unstable; urgency=medium . * New upstream release Checksums-Sha1: 7cda96eac1978648734f3a403abe4bdf65cfa7fe 2014 bedops_2.4.2

Accepted python-cutadapt 1.13-1 (source all amd64) into unstable

<debian-med-packag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: cutadapt - Clean biological sequences from high-throughput sequencing reads python-cutadapt - Clean biological sequences from high-throughput sequencing reads python3-cuta

Accepted biojava4-live 4.2.7+dfsg-1 (source all) into unstable

Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: libbiojava4-java - Java API to biological data and applications (default version) libbiojava4-java-doc - [Biology] Documentation for BioJava libbiojava4.0-jav

Accepted libzstd 1.2.0-1 (source amd64) into unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: libzstd-dev - fast lossless compression algorithm -- development files libzstd1 - fast lossless compression algorithm zstd - fast lossless compression algorithm -- CLI tool Closes: 863159 Changes: libz

Accepted python-biomaj3 3.0.20-1 (source all) into unstable, unstable

<debian-med-packag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: biomaj3-commons - biological data-bank updater python-biomaj3 - biological data-bank updater (Python 2) python3-biomaj3 - biological data-bank updater (Python 3) Closes: 85

Accepted bedops 2.4.20+dfsg-2 (source amd64) into unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: bedops - high-performance genomic feature operations Closes: 853892 854003 Changes: bedops (2.4.20+dfsg-2) unstable; urgency=medium . * avoid underlinking when linking with --as-needed (Closes: #854003)

Accepted bedops 2.4.20+dfsg-1 (source amd64) into unstable, unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Fri, 13 Jan 2017 10:27:13 + Source: bedops Binary: bedops Architecture: source amd64 Version: 2.4.20+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Olivier Sallou <osal...@debian.org> Changed-By: Olivier Sallou

Accepted baitfisher 1.0+dfsg-1 (source amd64) into unstable, unstable

kag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: baitfisher - software package for designing hybrid enrichment probes Closes: 851342 Changes: baitfisher (1.0+dfsg-1) unstable; urgency=medium . * Initial release (Closes: #851342) Ch

Accepted ncbi-blast+ 2.6.0-1 (source all amd64) into unstable

ian-med-packag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: blast2 - transitional dummy package to ncbi-blast+-legacy ncbi-blast+ - next generation suite of BLAST sequence search tools ncbi-blast+-legacy - NCBI Blast legacy call script Ch

Accepted biojava4-live 4.2.4+dfsg-2 (source all) into unstable

Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: libbiojava4-java - Java API to biological data and applications (default version) libbiojava4-java-doc - [Biology] Documentation for BioJava libbiojava4.0-jav

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