Re: [Freesurfer] AD cortical thickness signature

2017-08-16 Thread Yi, Hyon-Ah
Dear Doug ,, thanks for your suggestion .. I have more questions. 1. If then, I can get merged label using mir_mergelabels, As it is ' . label file', so I should run mris_label2annot and mis_anatomical_stats ? 2. is it possible to get the merged value of rh & lh ? Regards, Hyon-Ah ..

Re: [Freesurfer] AD cortical thickness signature

2017-08-16 Thread Douglas N Greve
not that I know of. You can merge the desired labels into one (mri_merge_labels) and then compute the mean in the merged label On 08/15/2017 11:56 PM, Yi, Hyon-Ah wrote: > Dear FS experts > > > I’m wondering whether there are ways of getting the single value of ROIs. > > I mean to get the value

Re: [Freesurfer] AD cortical thickness signature

2017-08-16 Thread Bruce Fischl
HI Hyon-Ah if your question is how to you compute the mean thickness for an ROI, if you have it in .label format you can simply call mris_anatomical_stats -l cheers Bruce On Wed, 16 Aug 2017, Yi, Hyon-Ah wrote: Dear FS experts I’m wondering whether there are ways of getting the

[Freesurfer] AD cortical thickness signature

2017-08-15 Thread Yi, Hyon-Ah
Dear FS experts I’m wondering whether there are ways of getting the single value of ROIs. I mean to get the value of cortical thickness of AD signature areas, such as supra marginal gyrus, inferior frontal cortex.. and so on .. the values of some areas can be get using aparcstats2table (in