Re: [Paraview] Send an array from client to server

John, That looks too convoluted. I haven't done this in a while so I'll need to refresh my memory a bit. I'll make an example today and then get back to you. Utkarsh On Sun, Sep 20, 2015 at 4:43 AM, Biddiscombe, John A. wrote: > Just following up so that when I’ve forgotten

[Paraview] 400GB dataset out of memory on 1k cores?

I get OOM on a ~400GB raw dataset that I process with a script below. I use 24 core nodes with 64GB per node. I tried using up to 1008 nodes. My question: Will increasing the number of cores/nodes help? Or is there some serial operation involved that will not be helped this way? Thank you Anton

[Paraview] (no subject)

I would be grateful for some advice on volume and surface rendering in Paraview. I am trying to generate 3D skull models from CT data. The reason for using Paraview is to take advantage of the detailed fly-through/movie capability. I can generate an acceptable 3D model that I can interact

Re: [Paraview] Plot Area over Time

As far as I can see, the information needed sits in Information -> Bounds -> X range Y range. Just don't know how I could extract it. On 21.09.2015 15:37, Marco Kokic wrote: Hey there, I simulate 2D tissue growth and use ParaView to visualize the data. I would like to plot the time

Re: [Paraview] 400GB dataset out of memory on 1k cores?

Hi Anton, Let's debug this a big. I suspect that the thresholds are the issue here. Does this script work? ext1= 4640 # data extent along 1 ext2= 4650 # data extent along 2 ext3= 4650 # data extent along 3 ffile = "./large/1000/zf5.raw" # fracture file imsize1 =

Re: [Paraview] Plot Area over Time

Marco, Excellent, thanks for sharing! Cory On Mon, Sep 21, 2015 at 11:30 AM, Marco Kokic wrote: > Found it: Filters -> Integrate Variables, then select Area, Filters -> > Plot Selection Over Time > > > On 21.09.2015 16:52, Marco Kokic wrote: > >> Rephrase: I'd like to

[Paraview] Multi-tiled Distributed Display

Hey everyone, I'm trying to run Paraview using the vrpn plugin so that I can show off Paraview on a distributed multi-tiled display, and I'm stuck on getting it set up. The head machine is named stallion and there are 20 different nodes that control 4 different screens horizontally that make

Re: [Paraview] Plot Area over Time

Found it: Filters -> Integrate Variables, then select Area, Filters -> Plot Selection Over Time On 21.09.2015 16:52, Marco Kokic wrote: Rephrase: I'd like to plot spatial bounds over time. On 21.09.2015 15:47, Marco Kokic wrote: As far as I can see, the information needed sits in Information

Re: [Paraview] Multi-tiled Distributed Display

Sorry, I also probably should of mentioned that I am running CentOS on all of the systems. Thanks Andrew Solis On Mon, Sep 21, 2015 at 11:02 AM, andrew solis wrote: > Hey everyone, > > I'm trying to run Paraview using the vrpn plugin so that I can show > off

Re: [Paraview] Multi-tiled Distributed Display

On Mon, Sep 21, 2015 at 1:05 PM, andrew solis wrote: > Sorry, I also probably should of mentioned that I am running CentOS on all > of the systems. > > Thanks > Andrew Solis > > On Mon, Sep 21, 2015 at 11:02 AM, andrew solis > wrote: > >> Hey

Re: [Paraview] Multi-tiled Distributed Display

typo in that last message: mpiexec -hosts 2 s01 4 s02 4 pvserver -tdx=4 -tdy=1 tile.pvx or any other syntax that starts up the right number of jobs on the right nodes David E DeMarle Kitware, Inc. R Engineer 21 Corporate Drive Clifton Park, NY 12065-8662 Phone: 518-881-4909 On Mon, Sep 21,

Re: [Paraview] [EXTERNAL] How to run pvbatch without any output?

Ruggiero, I believe you have to make a custom build with OSMesa. That way you are using a software framebuffer, rather than the one attached to your monitor. Then, you run with the offscreen-rendering flag. Alan From: ParaView [mailto:paraview-boun...@paraview.org] On Behalf Of Ruggiero

Re: [Paraview] (no subject)

> When I apply a threshold filter and view as a ‘Surface’ the image is a lot > more ‘blocky’ than in the other two applications. The image is dominated by > the artifactual lines due to the original data being acquired as axial > slices; whereas in OsiriX and 3D Slicer this gets smoothed out

Re: [Paraview] Isosurfaces with Hex elements

John, I commonly have unstructured finite element meshes that have been described to ParaView via an EnSight format as distinct 'Parts' based on material type. In deed, the isosurfaces have discontinuities, In my case, the discontinuities are desirable.

Re: [Paraview] Plot Area over Time

Rephrase: I'd like to plot spatial bounds over time. On 21.09.2015 15:47, Marco Kokic wrote: As far as I can see, the information needed sits in Information -> Bounds -> X range Y range. Just don't know how I could extract it. On 21.09.2015 15:37, Marco Kokic wrote: Hey there, I simulate

Re: [Paraview] 400GB dataset out of memory on 1k cores?

>From mexas Mon Sep 21 14:29:16 2015 >To: paraview@paraview.org >Subject: 400GB dataset out of memory on 1k cores? >Reply-To: me...@bris.ac.uk > >I get OOM on a ~400GB raw dataset >that I process with a script below. >I use 24 core nodes with 64GB per node. >I tried using up to 1008 nodes.

[Paraview] Saving with Solid Color information

Hi, My question is simple, but I can't figure it out an easy way to do it ! I want to save a SourceBox with the Solid Color that I've picked from the Select Colors dialog box. After picking a color and saving the dataset, the Solid Color info is not saved. Is there a way of doing what I want

[Paraview] Plot Area over Time

Hey there, I simulate 2D tissue growth and use ParaView to visualize the data. I would like to plot the time dependence of the area of a polygonal mesh. But I can't find a way to do that. Any suggestions would be much appreciated. Thanks in advance, Marco