Re: [R-pkg-devel] CRAN packages dependency on bioconductor packages

2024-05-14 Thread Lluís Revilla
Hi Junhui, There is a separate log for checking if your package works without suggested packages: in the StepReg results The noSuggests title leads to: https://www.stats.ox.ac.uk/pub/bdr/noSuggests/StepReg.out Where you can see that it fails if a user don't have BiocStyle installed. I don't know

Re: [R-pkg-devel] Package failing reverse dependency checks

2024-02-08 Thread Lluís Revilla
tip. Out of interest, is there a way to make win/Mac > builder run revdep checks? > > Writing: wyclif.substack.com > Book: www.wyclifsdust.com > > > On Thu, 8 Feb 2024 at 10:26, Lluís Revilla > wrote: > >> Hi David, >> >> If you didn't increase the versio

Re: [R-pkg-devel] Package failing reverse dependency checks

2024-02-08 Thread Lluís Revilla
Hi David, If you didn't increase the version number it could happen that the old version of the package was used (as CRAN might not be aware that there is a new version). The CRAN repository policy says: "Increasing the version number at each submission reduces confusion so is preferred even when

Re: [R-pkg-devel] new maintainer for CRAN package XML

2024-01-22 Thread Lluís Revilla
Dear Uwe and the CRAN team, Many thanks for maintaining the package for so long (>10 years!). I see the latest changes are in some internal C code related to updating the libxml2 library. In CRAN's experience, is this the highest time consuming task? I have some questions about how the

Re: [R-pkg-devel] Assistance Needed for Resolving Submission Issues with openaistream Package

2024-01-22 Thread Lluís Revilla
Hi Li Gen, This NOTE is part of the new checks on CRAN to comply with its policy. The error message was introduced in c85587 (2023/11/22), when incorporating this suggestion https://bugs.r-project.org/show_bug.cgi?id=18611. You can see the changes and checks in the browser here:

Re: [R-pkg-devel] Status of adbcpostgresql

2023-10-05 Thread Lluís Revilla
Hi Dewey, Currently there are several packages on a subfolder for human inspection. I don't think you can do anything else: sending this email might help drawing attention from your reviewer to your package. There might be some issues in the package that you'll need to address, try to find them

Re: [R-pkg-devel] What to do when a package is archived from CRAN

2023-08-31 Thread Lluís Revilla
The reasons that CRAN has for this (from: https://cran.r-project.org/src/contrib/PACKAGES.in) are: X-CRAN-History: Archived on 2023-08-19 for policy violation. Downloading on installation from github. Unarchived on 2023-08-30. X-CRAN-Comment: Archived on 2023-08-31 for policy violation. .

Re: [R-pkg-devel] package submissions no auto-processed message

2023-08-27 Thread Lluís Revilla
Hi, Are you referring to your package formods? I see it was released the same Friday 17 and it is already on CRAN. If this is not the package, it might be on the backlog of packages submitted to CRAN. You can check the queue at: https://r-hub.github.io/cransays/articles/dashboard.html Best,

Re: [R-pkg-devel] Missing ggPMX causing failure for nlmixr2rpt

2023-06-02 Thread Lluís Revilla
Dear John, I think the problem is that the package ggPMX is suggested, but nlmixr2rpt isn't prepared for when it isn't available. In such cases, a package shouldn't fail the checks. >From the CRAN policies https://cran.r-project.org/web/packages/policies.html : "A package listed in ‘Suggests’ or

Re: [R-pkg-devel] CRAN Vignette pdfs garbled in Firefox pdf viewer

2023-02-10 Thread Lluís Revilla
Hi, I can't read any vignettes of gcplyr in Firefox 109.0.1 from a Windows 10. But sorry, I don't have any solution. On Thu, 9 Feb 2023 at 21:18, Duncan Murdoch wrote: > On 09/02/2023 10:27 a.m., Mike Blazanin wrote: > > Hi all, my package gcplyr has several vignettes which, from CRAN, appear

Re: [R-pkg-devel] Package ‘wflo’ was removed from the CRAN repository.

2022-09-22 Thread Lluís Revilla
tually, I don’t really agree to have to resubmit, and > my time for doing so is very limited. Maybe in the next few weeks or so. > > > > Best > > > > Carsten > > > > > > Von: Lluís Revilla [mailto:lluis.revi...@gmail.com] > > Gesendet: Donnerstag, 22

Re: [R-pkg-devel] Package ‘wflo’ was removed from the CRAN repository.

2022-09-22 Thread Lluís Revilla
Hi Carsten, This seems to be an unfortunate chain of events between different packages: RcppMLPACK -> emstreeR -> wflo Package RcppMLPACK was archived on 2021-12-20 as issues were not corrected despite reminders. This resulted in the package emstreeR being archived on 2021-12-20 as requires

Re: [R-pkg-devel] Change package maintainer

2021-07-02 Thread Lluís Revilla
I'm ready to take over the package I will ask the CRAN team and give them more details. Many thanks to all. Lluís Revilla On Fri, 2 Jul 2021 at 08:38, Uwe Ligges wrote: > > > > On 01.07.2021 23:52, Duncan Murdoch wrote: > > On 01/07/2021 3:11 p.m., Dirk Eddelbuettel wrote: &

Re: [R-pkg-devel] Change package maintainer

2021-07-01 Thread Lluís Revilla
Thanks Uwe for answering, I have a question related to changing maintainers. What happens when the old/current maintainer does not respond to emails or other methods of contact? Would the new maintainer need to wait until the package is removed from CRAN to submit it again? Best, Lluís PS: Not

[R-pkg-devel] CRAN submissions

2021-01-31 Thread Lluís Revilla
Hi all, Some time ago, there was a question[1] about "how long is the average waiting time when submitting a new package ("newbies") until you get a manual reply or it's on CRAN, submitting an update with all OK before it hits CRAN". I have analyzed the data provided by cransays[2] (Many

Re: [R-pkg-devel] Error during automatic check for vignette re-building - The magick package is required to crop

2020-11-05 Thread Lluís Revilla
bbrev", y="Ref_ID", cex=1,gap=2.5,degree = 60, canvas.xlim = c(-5, 5), canvas.ylim = c(-3, 3), grid.col = color.grid) Hope you can solve it. Cheers, Lluís On Thu, 5 Nov 2020 at 22:00, Pablo Fonseca wrote: > > Dear Lluís Revilla, > > Thank you very much for the com

Re: [R-pkg-devel] Error during automatic check for vignette re-building - The magick package is required to crop

2020-11-05 Thread Lluís Revilla
Hi Pablo, "The magick package is required to crop" is related to using BiocStyle for your vignette. Not sure what causes it, but I reported this error some time ago: https://github.com/Bioconductor/BiocStyle/issues/77. On related issues and on bioc-devel mailing list

Re: [R-pkg-devel] checking PDF version of manual without hyperrefs or index ... ERROR

2020-10-30 Thread Lluís Revilla
Hi Anthony, I stumbled with the same issue for a package I submitted recently, the problem seems to be that LaTex doesn't know how to map this unicode character to a typesetting. My unicode character was \u2229 and I tried several ways to avoid this warning. On the vignette built with knitr I