If you want to see an example that calls MLlib's FPGrowth, you can
find them under the examples/ folder:
Scala:
https://github.com/apache/spark/blob/master/examples/src/main/scala/org/apache/spark/examples/mllib/FPGrowthExample.scala,
Java:
Correct. Prediction doesn't touch that code path. -Xiangrui
On Mon, Apr 13, 2015 at 9:58 AM, Jianguo Li flyingfromch...@gmail.com
wrote:
Hi,
In the GeneralizedLinearAlgorithm, which Logistic Regression relied on, it
says if userFeatureScaling is enabled, we will standardize the training
This could be empirically verified in spark-perf:
https://github.com/databricks/spark-perf. Theoretically, it would be
2x for k-means and logistic regression, because computation is doubled
but communication cost remains the same. -Xiangrui
On Tue, Apr 7, 2015 at 7:15 AM, Vasyl Harasymiv
tried passing the spark-sql jar using the -jar
spark-sql_2.11-1.3.0.jar
Thanks,
Jay
On Mar 17, 2015, at 12:50 PM, Xiangrui Meng men...@gmail.com wrote:
Please remember to copy the user list next time. I might not be able
to respond quickly. There are many others who can help or who can
Did you try to treat RDD[(Double, Vector)] as RDD[LabeledPoint]? If
that is the case, you need to cast them explicitly:
rdd.map { case (label, features) = LabeledPoint(label, features) }
-Xiangrui
On Mon, Apr 6, 2015 at 11:59 AM, Joanne Contact joannenetw...@gmail.com wrote:
Hello Sparkers,
Before OneHotEncoder or LabelIndexer is merged, you can define an UDF
to do the mapping.
val labelToIndex = udf { ... }
featureDF.withColumn(f3_dummy, labelToIndex(col(f3)))
See instructions here
We support sparse vectors in MLlib, which recognizes MLlib's sparse
vector and SciPy's csc_matrix with a single column. You can create RDD
of sparse vectors for your data and save/load them to/from parquet
format using dataframes. Sparse matrix supported will be added in 1.4.
-Xiangrui
On Mon,
)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:110)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Thanks,
Jay
On Apr 6, 2015, at 12:24 PM, Xiangrui Meng men...@gmail.com wrote:
Please attach the full stack trace. -Xiangrui
On Mon, Apr 6, 2015 at 12:06 PM, Jay
Could you try `sbt package` or `sbt compile` and see whether there are
errors? It seems that you haven't reached the ALS code yet. -Xiangrui
On Sat, Apr 4, 2015 at 5:06 AM, Phani Yadavilli -X (pyadavil)
pyada...@cisco.com wrote:
Hi ,
I am trying to run the following command in the Movie
Sorry, it should be toDF(text, id).
On Sun, Apr 5, 2015 at 9:21 PM, Xiangrui Meng men...@gmail.com wrote:
Try: sc.textFile(path/file).zipWithIndex().toDF(id, text) -Xiangrui
On Sun, Apr 5, 2015 at 7:50 PM, olegshirokikh o...@solver.com wrote:
What would be the most efficient neat method
Try: sc.textFile(path/file).zipWithIndex().toDF(id, text) -Xiangrui
On Sun, Apr 5, 2015 at 7:50 PM, olegshirokikh o...@solver.com wrote:
What would be the most efficient neat method to add a column with row ids to
dataframe?
I can think of something as below, but it completes with errors (at
In 1.3, you can use model.save(sc, hdfs path). You can check the
code examples here:
http://spark.apache.org/docs/latest/mllib-collaborative-filtering.html#examples.
-Xiangrui
On Fri, Apr 3, 2015 at 2:17 PM, Justin Yip yipjus...@prediction.io wrote:
Hello Zhou,
You can look at the
I think before 1.3 you also get stackoverflow problem in ~35
iterations. In 1.3.x, please use setCheckpointInterval to solve this
problem, which is available in the current master and 1.3.1 (to be
released soon). Btw, do you find 80 iterations are needed for
convergence? -Xiangrui
On Wed, Apr 1,
:18 PM, Xiangrui Meng men...@gmail.com wrote:
I cannot reproduce this error on master, but I'm not aware of any
recent bug fixes that are related. Could you build and try the current
master? -Xiangrui
On Tue, Mar 31, 2015 at 4:10 AM, Jaonary Rabarisoa jaon...@gmail.com
wrote:
Hi all
Ravi, we just merged https://issues.apache.org/jira/browse/SPARK-6642
and used the same lambda scaling as in 1.2. The change will be
included in Spark 1.3.1, which will be released soon. Thanks for
reporting this issue! -Xiangrui
On Tue, Mar 31, 2015 at 8:53 PM, Xiangrui Meng men...@gmail.com
as the input grew anyway.
So, basically I don't know anything more than you do, sorry!
On Tue, Mar 31, 2015 at 10:41 PM, Xiangrui Meng men...@gmail.com wrote:
Hey Sean,
That is true for explicit model, but not for implicit. The ALS-WR
paper doesn't cover the implicit model. In implicit formulation
to solve my problem?
Sendong Li
在 2015年3月31日，上午12:11，Xiangrui Meng men...@gmail.com 写道：
setCheckpointInterval was added in the current master and branch-1.3.
Please help check whether it works. It will be included in the 1.3.1 and
1.4.0 release. -Xiangrui
On Mon, Mar 30, 2015 at 7:27 AM
I cannot reproduce this error on master, but I'm not aware of any
recent bug fixes that are related. Could you build and try the current
master? -Xiangrui
On Tue, Mar 31, 2015 at 4:10 AM, Jaonary Rabarisoa jaon...@gmail.com wrote:
Hi all,
DataFrame with an user defined type (here mllib.Vector)
it comes to invariance. But FWIW I had always
understood the regularization to be multiplied by the number of
explicit ratings.
On Mon, Mar 30, 2015 at 5:51 PM, Xiangrui Meng men...@gmail.com wrote:
Okay, I didn't realize that I changed the behavior of lambda in 1.3.
to make it scale
Hi Xi,
Please create a JIRA if it takes longer to locate the issue. Did you
try a smaller k?
Best,
Xiangrui
On Thu, Mar 26, 2015 at 5:45 PM, Xi Shen davidshe...@gmail.com wrote:
Hi Burak,
After I added .repartition(sc.defaultParallelism), I can see from the log
the partition number is set
to get a similar
result in 1.3.
Sean and Shuo, which approach do you prefer? Do you know any existing
work discussing this?
Best,
Xiangrui
On Fri, Mar 27, 2015 at 11:27 AM, Xiangrui Meng men...@gmail.com wrote:
This sounds like a bug ... Did you try a different lambda? It would be
great if you
This PR updated the k-means|| initialization:
https://github.com/apache/spark/commit/ca7910d6dd7693be2a675a0d6a6fcc9eb0aaeb5d,
which was included in 1.3.0. It should fix kmean|| initialization with
large k. Please create a JIRA for this issue and send me the code and the
dataset to produce this
Hey Xi,
Have you tried Spark 1.3.0? The initialization happens on the driver node
and we fixed an issue with the initialization in 1.3.0. Again, please start
with a smaller k, and increase it gradually, Let us know at what k the
problem happens.
Best,
Xiangrui
On Sat, Mar 28, 2015 at 3:11 AM,
You can extend Gradient, e.g.,
https://github.com/apache/spark/blob/master/mllib/src/main/scala/org/apache/spark/mllib/optimization/Gradient.scala#L266,
and use it in GradientDescent:
has
vectors of 200 dimensions.
It is possible people never tested large dimension case.
Thanks,
David
On Tue, Mar 31, 2015 at 4:00 AM Xiangrui Meng men...@gmail.com wrote:
Hi Xi,
Please create a JIRA if it takes longer to locate the issue. Did you
try a smaller k?
Best,
Xiangrui
This is a PR in review to support ORC via the SQL data source API:
https://github.com/apache/spark/pull/3753. You can try pulling that PR
and help test it. -Xiangrui
On Wed, Mar 25, 2015 at 5:03 AM, Zsolt Tóth toth.zsolt@gmail.com wrote:
Hi,
I use sc.hadoopFile(directory,
Hi Martin,
Could you attach the code snippet and the stack trace? The default
implementation of some methods uses reflection, which may be the
cause.
Best,
Xiangrui
On Wed, Mar 25, 2015 at 3:18 PM, zapletal-mar...@email.cz wrote:
Thanks Peter,
I ended up doing something similar. I however
This sounds like a bug ... Did you try a different lambda? It would be
great if you can share your dataset or re-produce this issue on the
public dataset. Thanks! -Xiangrui
On Thu, Mar 26, 2015 at 7:56 AM, Ravi Mody rmody...@gmail.com wrote:
After upgrading to 1.3.0, ALS.trainImplicit() has been
Su, which Spark version did you use? -Xiangrui
On Thu, Mar 19, 2015 at 3:49 AM, Akhil Das ak...@sigmoidanalytics.com wrote:
To get these metrics out, you need to open the driver ui running on port
4040. And in there you will see Stages information and for each stage you
can see how much time
The official guide may help:
http://spark.apache.org/docs/latest/tuning.html#garbage-collection-tuning
-Xiangrui
On Tue, Mar 17, 2015 at 8:27 AM, jatinpreet jatinpr...@gmail.com wrote:
Hi,
I am getting very high GC time in my jobs. For smaller/real-time load, this
becomes a real problem.
!
Thanks,
Jay
On Mar 16, 2015, at 11:35 AM, Xiangrui Meng men...@gmail.com wrote:
Try this:
val ratings = purchase.map { line =
line.split(',') match { case Array(user, item, rate) =
(user.toInt, item.toInt, rate.toFloat)
}.toDF(user, item, rate)
Doc for DataFrames:
http
This is the default value (Double.MinValue) for invalid gain:
https://github.com/apache/spark/blob/master/mllib/src/main/scala/org/apache/spark/mllib/tree/model/InformationGainStats.scala#L67
Please ignore it. Maybe we should update `toString` to use scientific notation.
-Xiangrui
On Mon, Mar
Please check your classpath and make sure you don't have multiple
Spark versions deployed. If the classpath looks correct, please create
a JIRA for this issue. Thanks! -Xiangrui
On Tue, Mar 17, 2015 at 2:03 AM, Jeffrey Jedele
jeffrey.jed...@gmail.com wrote:
Hi all,
I'm trying to use the new LDA
that I needed to bug you :)
Jay
On Mar 17, 2015, at 11:48 AM, Xiangrui Meng men...@gmail.com wrote:
Please check this section in the user guide:
http://spark.apache.org/docs/latest/sql-programming-guide.html#inferring-the-schema-using-reflection
You need `import sqlContext.implicits
17, 2015, at 11:53 AM, Xiangrui Meng men...@gmail.com wrote:
This is the default value (Double.MinValue) for invalid gain:
https://github.com/apache/spark/blob/master/mllib/src/main/scala/org/apache/spark/mllib/tree/model/InformationGainStats.scala#L67
Please ignore it. Maybe we should update
Try increasing the driver memory. We store trees on the driver node.
If maxDepth=20 and numTrees=50, you may need a large driver memory to
store all tree models. You might want to start with a smaller maxDepth
and then increase it and see whether deep trees really help (vs. the
cost). -Xiangrui
https://issues.apache.org/jira/browse/SPARK-5954 is for this issue and
Shuo is working on it. We will first implement topByKey for RDD and
them we could add it to DataFrames. -Xiangrui
On Mon, Mar 9, 2015 at 9:43 PM, Moss rhoud...@gmail.com wrote:
I do have a schemaRDD where I want to group by
You can compute the standard deviations of the training data using
Statistics.colStats and then compare them with model coefficients to
compute feature importance. -Xiangrui
On Fri, Mar 13, 2015 at 11:35 AM, Natalia Connolly
natalia.v.conno...@gmail.com wrote:
Hello,
While running an
Actually, they should be INFO or DEBUG. Line search steps are
expected. You can configure log4j.properties to ignore those. A better
solution would be reporting this at
https://github.com/scalanlp/breeze/issues -Xiangrui
On Thu, Mar 12, 2015 at 5:46 PM, cjwang c...@cjwang.us wrote:
I am running
Try this:
val ratings = purchase.map { line =
line.split(',') match { case Array(user, item, rate) =
(user.toInt, item.toInt, rate.toFloat)
}.toDF(user, item, rate)
Doc for DataFrames:
http://spark.apache.org/docs/latest/sql-programming-guide.html
-Xiangrui
On Mon, Mar 16, 2015 at 9:08 AM,
You need to change `== 1` to `== i`. `println(t)` happens on the
workers, which may not be what you want. Try the following:
noSets.filter(t = model.predict(Utils.featurize(t)) ==
i).collect().foreach(println)
-Xiangrui
On Sat, Mar 7, 2015 at 3:20 PM, Pierce Lamb
richard.pierce.l...@gmail.com
cache() is lazy. The data is stored into memory after the first time
it gets materialized. So the first time you call `predict` after you
load the model back from HDFS, it still takes time to load the actual
data. The second time will be much faster. Or you can call
`userJavaRDD.count()` and
We don't support warm starts or online updates for decision trees. So
if you call train twice, only the second dataset is used for training.
-Xiangrui
On Thu, Mar 5, 2015 at 12:31 PM, drarse drarse.a...@gmail.com wrote:
I am testing the Random Forest in Spark, but I have a question... If I train
+user
On Wed, Mar 4, 2015, 8:21 AM Xiangrui Meng men...@gmail.com wrote:
You can use the save/load implementation in naive Bayes as reference:
https://github.com/apache/spark/blob/master/mllib/src/main/scala/org/apache/spark/mllib/classification/NaiveBayes.scala
Ping me on the JIRA page
Also try 1.3.0-RC1 or the current master. ALS should performance much
better in 1.3. -Xiangrui
On Tue, Mar 3, 2015 at 1:00 AM, Akhil Das ak...@sigmoidanalytics.com wrote:
You need to increase the parallelism/repartition the data to a higher number
to get ride of those.
Thanks
Best Regards
libgfortran.x86_64 4.1.2-52.el5_8.1 comes with libgfortran.so.1 but
not libgfortran.so.3. JBLAS requires the latter. If you have root
access, you can try to install a newer version of libgfortran.
Otherwise, maybe you can try Spark 1.3, which doesn't use JBLAS in
ALS. -Xiangrui
On Tue, Mar 3,
Lisen, did you use all m-by-n pairs during training? Implicit model
penalizes unobserved ratings, while explicit model doesn't. -Xiangrui
On Feb 26, 2015 6:26 AM, Sean Owen so...@cloudera.com wrote:
+user
On Thu, Feb 26, 2015 at 2:26 PM, Sean Owen so...@cloudera.com wrote:
I think I may
It may take some work to do online updates with an
MatrixFactorizationModel because you need to update some rows of the
user/item factors. You may be interested in spark-indexedrdd
(http://spark-packages.org/package/amplab/spark-indexedrdd).
We support save/load in Scala/Java. We are going to add
Try the following:
df.map { case Row(id: Int, num: Int, value: Double, x: Float) = //
replace those with your types
(id, Vectors.dense(num, value, x))
}.toDF(id, features)
-Xiangrui
On Thu, Feb 26, 2015 at 3:08 PM, mobsniuk mobsn...@gmail.com wrote:
I've been searching around and see others
It is not in MLlib. There is a JIRA for it:
https://issues.apache.org/jira/browse/SPARK-2336 and Ashutosh has an
implementation for integer values. -Xiangrui
On Thu, Feb 26, 2015 at 8:18 PM, Deep Pradhan pradhandeep1...@gmail.com wrote:
Has KNN classification algorithm been implemented on MLlib?
Made 3 votes to each of the talks. Looking forward to see them in
Hadoop Summit:) -Xiangrui
On Tue, Feb 24, 2015 at 9:54 PM, Reynold Xin r...@databricks.com wrote:
Hi all,
The Hadoop Summit uses community choice voting to decide which talks to
feature. It would be great if the community could
If you make `Image` a case class, then select(image.data) should work.
On Tue, Feb 24, 2015 at 3:06 PM, Jaonary Rabarisoa jaon...@gmail.com wrote:
Hi all,
I have a DataFrame that contains a user defined type. The type is an image
with the following attribute
class Image(w: Int, h: Int,
Btw, the correct syntax for alias should be
`df.select($image.data.as(features))`.
On Tue, Feb 24, 2015 at 3:35 PM, Xiangrui Meng men...@gmail.com wrote:
If you make `Image` a case class, then select(image.data) should work.
On Tue, Feb 24, 2015 at 3:06 PM, Jaonary Rabarisoa jaon...@gmail.com
You can use rdd.cartesian then find top-k by key to distribute the
work to executors. There is a trick to boost the performance: you need
to blockify user/product features and then use native matrix-matrix
multiplication. There is a relevant PR from Deb:
https://github.com/apache/spark/pull/3098 .
Did you try to use less number of partitions (user/product blocks)?
Did you use implicit feedback? In the current implementation, we only
do checkpointing with implicit feedback. We should adopt the
checkpoint strategy implemented in LDA:
Which Spark version did you use? Btw, there are three datasets from
MovieLens. The tutorial used the medium one (1 million). -Xiangrui
On Mon, Feb 23, 2015 at 8:36 AM, poiuytrez guilla...@databerries.com wrote:
What do you mean?
--
View this message in context:
Yes, we are going to expose the developer API. There was a long
discussion in the PR: https://github.com/apache/spark/pull/3637. So we
marked them package private and look for feedback on how to improve
it. Please implement your classes under `spark.ml` for now and let us
know your feedback.
= 1.0, and numIter = 20)
1.1.1 - RSME = 1.335831 (rank = 8 and lambda = 1.0, and numIter = 10)
Cheers
k/
On Mon, Feb 23, 2015 at 12:37 PM, Xiangrui Meng men...@gmail.com wrote:
Which Spark version did you use? Btw, there are three datasets from
MovieLens. The tutorial used the medium one (1
FYI, in 1.3 we support save/load tree models in Scala and Java. We will add
save/load support to Python soon. -Xiangrui
On Mon, Feb 23, 2015 at 2:57 PM, Sebastián Ramírez
sebastian.rami...@senseta.com wrote:
In your log it says:
pickle.PicklingError: Can't pickle type 'thread.lock': it's not
Hi Antony, Is it easy for you to try Spark 1.3.0 or master? The ALS
performance should be improved in 1.3.0. -Xiangrui
On Fri, Feb 20, 2015 at 1:32 PM, Antony Mayi
antonym...@yahoo.com.invalid wrote:
Hi Ilya,
thanks for your insight, this was the right clue. I had default parallelism
already
huge?
On Wed, Feb 18, 2015 at 5:43 AM, Xiangrui Meng men...@gmail.com wrote:
Did you cache the data? Was it fully cached? The k-means
implementation doesn't create many temporary objects. I guess you need
more RAM to avoid GC triggered frequently. Please monitor the memory
usage using
on this.
Thanks,
Jatin
On Wed, Feb 18, 2015 at 3:07 AM, Xiangrui Meng men...@gmail.com wrote:
If there exists a sample that doesn't not belong to A/B/C, it means
that there exists another class D or Unknown besides A/B/C. You should
have some of these samples in the training set in order to let naive
The best step size depends on the condition number of the problem. You
can try some conditioning heuristics first, e.g., normalizing the
columns, and then try a common step size like 0.01. We should
implement line search for linear regression in the future, as in
LogisticRegressionWithLBFGS. Line
Did you cache the data? Was it fully cached? The k-means
implementation doesn't create many temporary objects. I guess you need
more RAM to avoid GC triggered frequently. Please monitor the memory
usage using YourKit or VisualVM. -Xiangrui
On Wed, Feb 11, 2015 at 1:35 AM, lihu lihu...@gmail.com
Hey Sandy,
The work should be done by a VectorAssembler, which combines multiple
columns (double/int/vector) into a vector column, which becomes the
features column for regression. We can going to create JIRAs for each
of these standard feature transformers. It would be great if you can
help
JavaDStream.foreachRDD
(https://spark.apache.org/docs/1.2.1/api/java/org/apache/spark/streaming/api/java/JavaDStreamLike.html#foreachRDD(org.apache.spark.api.java.function.Function))
and Statistics.corr
The complexity of DIMSUM is independent of the number of rows but
still have quadratic dependency on the number of columns. 1.5M columns
may be too large to use DIMSUM. Try to increase the threshold and see
whether it helps. -Xiangrui
On Tue, Feb 17, 2015 at 6:28 AM, Debasish Das
Thanks! I added Radius to
https://cwiki.apache.org/confluence/display/SPARK/Powered+By+Spark.
-Xiangrui
On Tue, Feb 10, 2015 at 12:02 AM, Alexis Roos alexis.r...@gmail.com wrote:
Also long due given our usage of Spark ..
Radius Intelligence:
URL: radius.com
Description:
Spark, MLLib
Using
If there exists a sample that doesn't not belong to A/B/C, it means
that there exists another class D or Unknown besides A/B/C. You should
have some of these samples in the training set in order to let naive
Bayes learn the priors. -Xiangrui
On Tue, Feb 10, 2015 at 10:44 PM, jatinpreet
Could you share the error log? What do you mean by 500 instead of
200? If this is the number of files, try to use `repartition` before
calling naive Bayes, which works the best when the number of
partitions matches the number of cores, or even less. -Xiangrui
On Tue, Feb 10, 2015 at 10:34 PM,
It may be caused by GC pause. Did you check the GC time in the Spark
UI? -Xiangrui
On Sun, Feb 15, 2015 at 8:10 PM, Debasish Das debasish.da...@gmail.com wrote:
Hi,
I am sometimes getting WARN from running Similarity calculation:
15/02/15 23:07:55 WARN BlockManagerMasterActor: Removing
`mean()` and `variance()` are not defined in `Vector`. You can use the
mean and variance implementation from commons-math3
(http://commons.apache.org/proper/commons-math/javadocs/api-3.4.1/index.html)
if you don't want to implement them. -Xiangrui
On Fri, Feb 6, 2015 at 12:50 PM, SK
Logistic regression outputs probabilities if the data fits the model
assumption. Otherwise, you might need to calibrate its output to
correctly read it. You may be interested in reading this:
http://fastml.com/classifier-calibration-with-platts-scaling-and-isotonic-regression/.
We have isotonic
No particular reason. We didn't add it in the first version. Let's add
it in 1.4. -Xiangrui
On Thu, Feb 5, 2015 at 3:44 PM, jamborta jambo...@gmail.com wrote:
hi all,
just wondering if there is a reason why it is not possible to add intercepts
for streaming regression models? I understand
Could you check the Spark UI and see whether there are RDDs being
kicked out during the computation? We cache the residual RDD after
each iteration. If we don't have enough memory/disk, it gets
recomputed and results something like `t(n) = t(n-1) + const`. We
might cache the features multiple
The C implementation of Word2Vec updates the model using multi-threads
without locking. It is hard to implement it in a distributed way. In
the MLlib implementation, each work holds the entire model in memory
and output the part of model that gets updated. The driver still need
to collect and
The assumption of implicit feedback model is that the unobserved
ratings are more likely to be negative. So you may want to add some
negatives for evaluation. Otherwise, the input ratings are all 1 and
the test ratings are all 1 as well. The baseline predictor, which uses
the average rating (that
You can get a SchemaRDD from the Hive table, map it into a RDD of
Vectors, and then construct a RowMatrix. The transformations are lazy,
so there is no external storage requirement for intermediate data.
-Xiangrui
On Sun, Jan 18, 2015 at 4:07 AM, guxiaobo1982 guxiaobo1...@qq.com wrote:
Hi,
We
You can save the cluster centers as a SchemaRDD of two columns (id:
Int, center: Array[Double]). When you load it back, you can construct
the k-means model from its cluster centers. -Xiangrui
On Tue, Jan 20, 2015 at 11:55 AM, Cheng Lian lian.cs@gmail.com wrote:
This is because KMeanModel is
.
Best,
Xiangrui
On Wed, Jan 14, 2015 at 1:04 PM, Nishanth P S nishant...@gmail.com wrote:
Yes, we are close to having more 2 billion users. In this case what is the
best way to handle this.
Thanks,
Nishanth
On Fri, Jan 9, 2015 at 9:50 PM, Xiangrui Meng men...@gmail.com wrote:
Do you have
Yes, you can only use RowMatrix.multiply() within the driver. We are
working on distributed block matrices and linear algebra operations on
top of it, which would fit your use cases well. It may take several
PRs to finish. You can find the first one here:
https://github.com/apache/spark/pull/3200
values given by Spark and other two.
Thanks,
Upul
On Sat, Jan 10, 2015 at 11:17 AM, Xiangrui Meng men...@gmail.com wrote:
You need to subtract mean values to obtain the covariance matrix
(http://en.wikipedia.org/wiki/Covariance_matrix).
On Fri, Jan 9, 2015 at 6:41 PM, Upul Bandara upulband
):
com.esotericsoftware.kryo.KryoException: Buffer overflow. Available: 5,
required: 8
Just calling colStats doesn't actually compute those statistics, does it? It
looks like the computation is only carried out once you call the .mean()
method.
On Sat, Jan 10, 2015 at 7:04 AM, Xiangrui Meng men...@gmail.com wrote
I don't know the root cause. Could you try including only
libraryDependencies += org.apache.spark %% spark-mllib % 1.1.1
It should be sufficient because mllib depends on core.
-Xiangrui
On Mon, Jan 12, 2015 at 2:27 PM, Jianguo Li flyingfromch...@gmail.com wrote:
Hi,
I am trying to build my
How big is your data? Did you see other error messages from executors?
It seems to me like a shuffle communication error. This thread may be
relevant:
http://mail-archives.apache.org/mod_mbox/spark-user/201402.mbox/%3ccalrnvjuvtgae_ag1rqey_cod1nmrlfpesxgsb7g8r21h0bm...@mail.gmail.com%3E
Do you have more than 2 billion users/products? If not, you can pair
each user/product id with an integer (check RDD.zipWithUniqueId), use
them in ALS, and then join the original bigInt IDs back after
training. -Xiangrui
On Fri, Jan 9, 2015 at 5:12 PM, nishanthps nishant...@gmail.com wrote:
Hi,
;
Thanks,
Upul
On Fri, Jan 9, 2015 at 2:11 AM, Xiangrui Meng men...@gmail.com wrote:
The Julia code is computing the SVD of the Gram matrix. PCA should be
applied to the covariance matrix. -Xiangrui
On Thu, Jan 8, 2015 at 8:27 AM, Upul Bandara upulband...@gmail.com
wrote:
Hi All,
I tried
is there an easy/obvious fix?
On Wed, Jan 7, 2015 at 7:30 PM, Xiangrui Meng men...@gmail.com wrote:
There is some serialization overhead. You can try
https://github.com/apache/spark/blob/master/python/pyspark/mllib/stat.py#L107
. -Xiangrui
On Wed, Jan 7, 2015 at 9:42 AM, rok rokros...@gmail.com wrote
sample 2 * n tuples, split them into two parts, balance the sizes of
these parts by filtering some tuples out
How do you guarantee that the two RDDs have the same size?
-Xiangrui
On Fri, Jan 9, 2015 at 3:40 AM, Niklas Wilcke
1wil...@informatik.uni-hamburg.de wrote:
Hi Spark community,
I have
exception
On Wed, Jan 7, 2015 at 10:51 AM, Xiangrui Meng men...@gmail.com wrote:
Could you attach the executor log? That may help identify the root
cause. -Xiangrui
On Mon, Jan 5, 2015 at 11:12 PM, Priya Ch learnings.chitt...@gmail.com
wrote:
Hi All,
Word2Vec and TF-IDF algorithms
The Julia code is computing the SVD of the Gram matrix. PCA should be
applied to the covariance matrix. -Xiangrui
On Thu, Jan 8, 2015 at 8:27 AM, Upul Bandara upulband...@gmail.com wrote:
Hi All,
I tried to do PCA for the Iris dataset
[https://archive.ics.uci.edu/ml/datasets/Iris] using MLLib
There is some serialization overhead. You can try
https://github.com/apache/spark/blob/master/python/pyspark/mllib/stat.py#L107
. -Xiangrui
On Wed, Jan 7, 2015 at 9:42 AM, rok rokros...@gmail.com wrote:
I have an RDD of SparseVectors and I'd like to calculate the means returning
a dense vector.
script
Am I correct?
On Mon, Jan 5, 2015 at 10:35 PM, Xiangrui Meng men...@gmail.com wrote:
It might be hard to do that with spark-submit, because the executor
JVMs may be already up and running before a user runs spark-submit.
You can try to use `System.setProperty` to change the property
Which Spark version are you using? We made this configurable in 1.1:
https://github.com/apache/spark/blob/master/mllib/src/main/scala/org/apache/spark/mllib/recommendation/ALS.scala#L202
-Xiangrui
On Tue, Jan 6, 2015 at 12:57 PM, Fernando O. fot...@gmail.com wrote:
Hi,
I was doing a tests
This is addressed in https://issues.apache.org/jira/browse/SPARK-4789.
In the new pipeline API, we can simply output two columns, one for the
best predicted class, and the other for probabilities or confidence
scores for each class. -Xiangrui
On Tue, Jan 6, 2015 at 11:43 AM, Jianguo Li
Could you attach the executor log? That may help identify the root
cause. -Xiangrui
On Mon, Jan 5, 2015 at 11:12 PM, Priya Ch learnings.chitt...@gmail.com wrote:
Hi All,
Word2Vec and TF-IDF algorithms in spark mllib-1.1.0 are working only in
local mode and not on distributed mode. Null
It might be hard to do that with spark-submit, because the executor
JVMs may be already up and running before a user runs spark-submit.
You can try to use `System.setProperty` to change the property at
runtime, though it doesn't seem to be a good solution. -Xiangrui
On Fri, Jan 2, 2015 at 6:28
I created a JIRA for it:
https://issues.apache.org/jira/browse/SPARK-5094. Hopefully someone
would work on it and make it available in the 1.3 release. -Xiangrui
On Sun, Jan 4, 2015 at 6:58 PM, Christopher Thom
christopher.t...@quantium.com.au wrote:
Hi,
I wonder if anyone knows when a
How big is your dataset, and what is the vocabulary size? -Xiangrui
On Sun, Jan 4, 2015 at 11:18 PM, Eric Zhen zhpeng...@gmail.com wrote:
Hi,
When we run mllib word2vec(spark-1.1.0), driver get stuck with 100% cup
usage. Here is the jstack output:
main prio=10 tid=0x40112800
Hopefully the new pipeline API addresses this problem. We have a code
example here:
https://github.com/apache/spark/blob/master/examples/src/main/scala/org/apache/spark/examples/ml/SimpleTextClassificationPipeline.scala
-Xiangrui
On Mon, Dec 29, 2014 at 5:22 AM, andy petrella
101 - 200 of 464 matches
Mail list logo
