Re: [GraphX]: Prevent recomputation of DAG

2024-03-18 Thread Mich Talebzadeh
Hi, I must admit I don't know much about this Fruchterman-Reingold (call it FR) visualization using GraphX and Kubernetes..But you are suggesting this slowdown issue starts after the second iteration, and caching/persisting the graph after each iteration does not help. FR involves many

[GraphX]: Prevent recomputation of DAG

2024-03-17 Thread Marek Berith
Dear community, for my diploma thesis, we are implementing a distributed version of Fruchterman-Reingold visualization algorithm, using GraphX and Kubernetes. Our solution is a backend that continously computes new positions of vertices in a graph and sends them via RabbitMQ to a consumer

State of GraphX and GraphFrames

2023-04-23 Thread g
Hello, I am currently doing my Master thesis on data provenance on Apache Spark and would like to extend the provenance capabilities to include GraphX/GraphFrames. I am curious what the current status of both GraphX and GraphFrames is. It seems that GraphX is no longer being updated (but still

Re: What is the range of the PageRank value of graphx

2023-03-28 Thread lee
That is, every pagerank value has no relationship to 1, right? As long as we focus on the size of each pagerank value in Graphx, we don't need to focus on the range, is that right? | | 李杰 | | leedd1...@163.com | Replied Message | From | Sean Owen | | Date | 3/28/2023 22:33

Re: What is the range of the PageRank value of graphx

2023-03-28 Thread Sean Owen
e pagerank using HugeGraph, each pagerank value is less > than 1, and the total of pageranks is 1. However, the PageRank value of > graphx is often greater than 1, so what is the range of the PageRank value > of graphx? > > > > > > > 李杰 > leedd1...@163.com >

What is the range of the PageRank value of graphx

2023-03-28 Thread lee
When I calculate pagerank using HugeGraph, each pagerank value is less than 1, and the total of pageranks is 1. However, the PageRank value of graphx is often greater than 1, so what is the range of the PageRank value of graphx? || 李杰 | | leedd1...@163.com |

Re: GraphX Support

2022-03-25 Thread Bjørn Jørgensen
BTW , is MLlib still in active development? > > Thanks > > On Tue, Mar 22, 2022 at 07:11 Sean Owen wrote: > >> GraphX is not active, though still there and does continue to build and >> test with each Spark release. GraphFrames kind of superseded it, but is >>

Re: GraphX Support

2022-03-25 Thread Bitfox
BTW , is MLlib still in active development? Thanks On Tue, Mar 22, 2022 at 07:11 Sean Owen wrote: > GraphX is not active, though still there and does continue to build and > test with each Spark release. GraphFrames kind of superseded it, but is > also not super active FWIW. > >

Re: [EXTERNAL] Re: GraphX Support

2022-03-25 Thread Bjørn Jørgensen
graphs utils and documentation <https://www.arangodb.com/docs/stable/graphs.html> tir. 22. mar. 2022 kl. 00:49 skrev Jacob Marquez : > Awesome, thank you! > > > > *From:* Sean Owen > *Sent:* Monday, March 21, 2022 4:11 PM > *To:* Jacob Marquez > *Cc:* user@spark.apa

Re: GraphX Support

2022-03-22 Thread Enrico Minack
Right, GraphFrames is not very active and maintainers don't even have the capacity to make releases. Enrico Am 22.03.22 um 00:10 schrieb Sean Owen: GraphX is not active, though still there and does continue to build and test with each Spark release. GraphFrames kind of superseded

RE: [EXTERNAL] Re: GraphX Support

2022-03-21 Thread Jacob Marquez
Awesome, thank you! From: Sean Owen Sent: Monday, March 21, 2022 4:11 PM To: Jacob Marquez Cc: user@spark.apache.org Subject: [EXTERNAL] Re: GraphX Support You don't often get email from sro...@gmail.com<mailto:sro...@gmail.com>. Learn why this is important<http

Re: GraphX Support

2022-03-21 Thread Sean Owen
GraphX is not active, though still there and does continue to build and test with each Spark release. GraphFrames kind of superseded it, but is also not super active FWIW. On Mon, Mar 21, 2022 at 6:03 PM Jacob Marquez wrote: > Hello! > > > > My team and I are evaluating Graph

GraphX Support

2022-03-21 Thread Jacob Marquez
Hello! My team and I are evaluating GraphX as a possible solution. Would someone be able to speak to the support of this Spark feature? Is there active development or is GraphX in maintenance mode (e.g. updated to ensure functionality with new Spark releases)? Thanks in advance for your help

GraphX Pregel: Access current iteration i

2021-11-08 Thread Jannik Rau
var i" as an object variable of the Pregel object? Or don't you plan to do this and rather recommend me using a different Graphx utility, which is designed for such a scenario? Thanks for any answer in advance! Kind Regards,

Is there a good way for Spark GraphX to pull JanusGraph data?

2020-10-26 Thread Lucien
Hi all. As the title,Is there any good plan? Or other suggestions, thanks for all answers. -- Best regards Lucien

Connected components using GraphFrames is significantly slower than GraphX?

2020-02-16 Thread kant kodali
Hi All, Trying to understand why connected components algorithms runs much slower than the graphX equivalent? Graphx code creates 16 stages. GraphFrame graphFrame = GraphFrame.fromEdges(edges); Dataset connectedComponents = graphFrame.connectedComponents().setAlgorithm("graphx&

Re: GraphX performance feedback

2019-11-28 Thread mahzad kalantari
Ok thanks! Le jeu. 28 nov. 2019 à 11:27, Phillip Henry a écrit : > I saw a large improvement in my GraphX processing by: > > - using fewer partitions > - using fewer executors but with much more memory. > > YMMV. > > Phillip > > On Mon, 25 Nov 2019, 19:14 mahzad ka

Re: GraphX performance feedback

2019-11-28 Thread Phillip Henry
I saw a large improvement in my GraphX processing by: - using fewer partitions - using fewer executors but with much more memory. YMMV. Phillip On Mon, 25 Nov 2019, 19:14 mahzad kalantari, wrote: > Thanks for your answer, my use case is friend recommandation for 200 > million profils.

Re: GraphX performance feedback

2019-11-25 Thread mahzad kalantari
(once-off) can be still fine in graphx - you have though > to carefully design the process. > > Am 25.11.2019 um 20:04 schrieb mahzad kalantari < > mahzad.kalant...@gmail.com>: > >  > Hi all > > My question is about GraphX, I 'm looking for user feedbacks on the &g

Re: GraphX performance feedback

2019-11-25 Thread Jörn Franke
I think it depends what you want do. Interactive big data graph analytics are probably better of in Janusgraph or similar. Batch processing (once-off) can be still fine in graphx - you have though to carefully design the process. > Am 25.11.2019 um 20:04 schrieb mahzad kalantari : > &g

GraphX performance feedback

2019-11-25 Thread mahzad kalantari
Hi all My question is about GraphX, I 'm looking for user feedbacks on the performance. I read this paper written by Facebook team that says Graphx has very poor performance. https://engineering.fb.com/core-data/a-comparison-of-state-of-the-art-graph-processing-systems/ Has anyone already

Re: graphx vs graphframes

2019-10-17 Thread Nicolas Paris
h, including Cypher support, > > http://apache-spark-developers-list.1001551.n3.nabble.com/ > Add-spark-dependency-on-on-org-opencypher-okapi-shade-okapi-td28118.html > > and I remembered your post. > > Actually, GraphX and GraphFrames are both not being developed

Re: graphx vs graphframes

2019-10-17 Thread Alastair Green
.nabble.com/Add-spark-dependency-on-on-org-opencypher-okapi-shade-okapi-td28118.html] and I remembered your post. Actually, GraphX and GraphFrames are both not being developed actively, so far as I can tell. The only activity on GraphX in the last two years was a fix for Scala 2.13 functionality

graphx vs graphframes

2019-09-22 Thread Nicolas Paris
hi all graphframes was intended to replace graphx. however the former looks not maintained anymore while the latter is still active. any thought ? -- nicolas - To unsubscribe e-mail: user-unsubscr...@spark.apache.org

How to Load a Graphx Graph from a parquet file?

2019-08-29 Thread Alexander Czech
Hey all, I want to load a parquet containing my edges into an Graph my code so far looks like this: val edgesDF = spark.read.parquet("/path/to/edges/parquet/") val edgesRDD = edgesDF.rdd val graph = Graph.fromEdgeTuples(edgesRDD, 1) But simply this produces an error: [error] found :

GraphX parameters tuning

2019-05-16 Thread muaz-32
Hi everyone. I am doing my master thesis in the topic of Automatic parameter tuning of graph processing frameworks. Now, we are aiming to optimize GraphX jobs. I have an initial list of parameters which we would like to tune: spark.memory.fraction spark.executor.memory spark.shuffle.compress

Request for a working example of using Pregel API in GraphX using Spark Scala

2019-05-05 Thread Basavaraj
Hello All I am a beginner in Spark, trying to use GraphX for an iterative processing by connecting to Kafka Stream Processing Looking for any git reference to real application example, in Scala Please revert with any reference to it, or if someone is trying to build, I could join them

Re: [GraphX] Preserving Partitions when reading from HDFS

2019-04-25 Thread M Bilal
quot;33554432")` to tune the partition size when reading from HDFS. > > Thanks, > Manu Zhang > > On Mon, Apr 15, 2019 at 11:28 PM M Bilal wrote: > >> Hi, >> >> I have implemented a custom partitioning algorithm to partition graphs in >> GraphX. Savi

Re: [GraphX] Preserving Partitions when reading from HDFS

2019-04-15 Thread Manu Zhang
algorithm to partition graphs in > GraphX. Saving the partitioning graph (the edges) to HDFS creates separate > files in the output folder with the number of files equal to the number of > Partitions. > > However, reading back the edges creates number of partitions that are > e

[GraphX] Preserving Partitions when reading from HDFS

2019-04-15 Thread M Bilal
Hi, I have implemented a custom partitioning algorithm to partition graphs in GraphX. Saving the partitioning graph (the edges) to HDFS creates separate files in the output folder with the number of files equal to the number of Partitions. However, reading back the edges creates number

[GraphX] - OOM Java Heap Space

2018-10-28 Thread Thodoris Zois
Hello, I have the edges of a graph stored as parquet files (about 3GB). I am loading the graph and trying to compute the total number of triplets and triangles. Here is my code: val edges_parq = sqlContext.read.option("header","true").parquet(args(0) + "/year=" + year) val edges:

[Spark-GraphX] Conductance, Bridge Ratio & Diameter

2018-10-18 Thread Thodoris Zois
Hello, I am trying to compute conductance, bridge ratio and diameter on a given graph but I face some problems. - For the conductance my problem is how to compute the cuts so that they are kinda semi-clustered. Is the partitioningBy from GraphX related to dividing a graph into multiple

what is the query language used for graphX?

2018-05-02 Thread kant kodali
Hi All, what is the query language used for graphX? are there any plans to introduce gremlin or is that idea being dropped and go with Spark SQL? Thanks!

Depth First Search in GraphX

2018-04-22 Thread abagavat
Has anyone come across involving Depth First Search in Spark GraphX? Just wondering if that could be possible with Spark GraphX. I searched a lot. But found just results of BFS. If someone have an idea about it, please share with me. I would love to learn about it's possibility in Spark GraphX

Re: Log analysis with GraphX

2018-02-22 Thread JB Data
gt; Then another critical element is how to visualize the results of your > graph analysis (does not have to be a graph to visualize, but it could be > also a table with if/then rules , eg if product placed at top right then > 50% more people buy it). > > > &

Re: Log analysis with GraphX

2018-02-21 Thread JB Data
n rules , eg if product placed at top right then > 50% more people buy it). > > > > However if you want to do some other analysis such as random forests or > Markov chains then graphx alone will not help you much. > > > >> On 10. Feb 2018, at 15:49, Philippe de Rochambeau &

Re: Does Pyspark Support Graphx?

2018-02-19 Thread xiaobo
icholas.hakob...@rallyhealth.com> Date: Tue,Feb 20,2018 3:37 AM To: xiaobo <guxiaobo1...@qq.com> Cc: Denny Lee <denny.g@gmail.com>, user@spark.apache.org <user@spark.apache.org> Subject: Re: Does Pyspark Support Graphx? If you copy the Jar file and all of the dependencies to the ma

Re: Does Pyspark Support Graphx?

2018-02-19 Thread Nicholas Hakobian
not connect to the internet. > > > > -- Original -- > *From:* Denny Lee <denny.g@gmail.com> > *Date:* Mon,Feb 19,2018 10:23 AM > *To:* xiaobo <guxiaobo1...@qq.com> > *Cc:* user@spark.apache.org <user@spark.apache.org>

Re: Does Pyspark Support Graphx?

2018-02-18 Thread xiaobo
k.apache.org <user@spark.apache.org> Subject: Re: Does Pyspark Support Graphx? Note the --packages option works for both PySpark and Spark (Scala). For the SparkLauncher class, you should be able to include packages ala: spark.addSparkArg("--packages", "graphframes:0.5.0-s

Re: Does Pyspark Support Graphx?

2018-02-18 Thread Denny Lee
1:07 AM > *To:* 94035420 <guxiaobo1...@qq.com> > *Cc:* user@spark.apache.org <user@spark.apache.org> > *Subject:* Re: Does Pyspark Support Graphx? > That’s correct - you can use GraphFrames though as it does support > PySpark. > On Sat, Feb 17, 2018 at 17:36 94035420 <

Re: Does Pyspark Support Graphx?

2018-02-18 Thread xiaobo
gt; Cc: user@spark.apache.org <user@spark.apache.org> Subject: Re: Does Pyspark Support Graphx? That??s correct - you can use GraphFrames though as it does support PySpark. On Sat, Feb 17, 2018 at 17:36 94035420 <guxiaobo1...@qq.com> wrote: I can not find anything for graphx module in the p

Re: Does Pyspark Support Graphx?

2018-02-18 Thread Felix Cheung
. From: Nicolas Paris <nipari...@gmail.com> Sent: Sunday, February 18, 2018 12:31:27 AM To: Denny Lee Cc: xiaobo; user@spark.apache.org Subject: Re: Does Pyspark Support Graphx? > Most likely not as most of the effort is currently on GraphFrames - a great > blog post on the what GraphF

Re: Does Pyspark Support Graphx?

2018-02-18 Thread Nicolas Paris
> Most likely not as most of the effort is currently on GraphFrames  - a great > blog post on the what GraphFrames offers can be found at: https:// Is the graphframes package still active ? The github repository indicates it's not extremelly active. Right now, there is no available package for

Re: Does Pyspark Support Graphx?

2018-02-17 Thread Denny Lee
Most likely not as most of the effort is currently on GraphFrames - a great blog post on the what GraphFrames offers can be found at: https://databricks.com/blog/2016/03/03/introducing-graphframes.html. Is there a particular scenario or situation that you're addressing that requires GraphX vs

Re: Does Pyspark Support Graphx?

2018-02-17 Thread xiaobo
es Pyspark Support Graphx? That??s correct - you can use GraphFrames though as it does support PySpark. On Sat, Feb 17, 2018 at 17:36 94035420 <guxiaobo1...@qq.com> wrote: I can not find anything for graphx module in the python API document, does it mean it is not supported yet?

Re: Does Pyspark Support Graphx?

2018-02-17 Thread Denny Lee
That’s correct - you can use GraphFrames though as it does support PySpark. On Sat, Feb 17, 2018 at 17:36 94035420 <guxiaobo1...@qq.com> wrote: > I can not find anything for graphx module in the python API document, does > it mean it is not supported yet? >

Does Pyspark Support Graphx?

2018-02-17 Thread 94035420
I can not find anything for graphx module in the python API document, does it mean it is not supported yet?

[Spark GraphX pregel] default value for EdgeDirection not consistent between programming guide and API documentation

2018-02-13 Thread Ramon Bejar Torres
Hi, I just wanted to notice that in the API doc page for the pregel operator (graphX API for spark 2.2.1): http://spark.apache.org/docs/latest/api/scala/index.html#org.apache.spark.graphx.GraphOps@pregel[A](A,Int,EdgeDirection)((VertexId,VD,A)%E2%87%92VD,(EdgeTriplet[VD,ED])%E2%87%92Iterator

Re: Log analysis with GraphX

2018-02-10 Thread Philippe de Rochambeau
ther analysis such as random forests or > Markov chains then graphx alone will not help you much. > >> On 10. Feb 2018, at 15:49, Philippe de Rochambeau <phi...@free.fr> wrote: >> >> Hello, >> >> Let’s say a website log is structured as follows: >&g

Re: Log analysis with GraphX

2018-02-10 Thread Jörn Franke
with if/then rules , eg if product placed at top right then 50% more people buy it). However if you want to do some other analysis such as random forests or Markov chains then graphx alone will not help you much. > On 10. Feb 2018, at 15:49, Philippe de Rochambeau <phi...@free.fr> wrote: &

Log analysis with GraphX

2018-02-10 Thread Philippe de Rochambeau
, … Is GraphX the appropriate tool to analyse the website users’ paths and clicking trends, Many thanks. Philippe - To unsubscribe e-mail: user-unsubscr...@spark.apache.org

Apache Spark GraphX: java.lang.ArrayIndexOutOfBoundsException: -1

2017-10-16 Thread Andy Long
We have hit a bug with GraphX when calling the connectedComponents function, where it errors with the following error java.lang.ArrayIndexOutOfBoundsException: -1 I've found this bug report: https://issues.apache.org/jira/browse/SPARK-5480 Has anyone else hit this issue and if so did how did you

Re: Spark 2.1.1 Graphx graph loader GC overhead error

2017-07-11 Thread Aritra Mandal
s message in context: http://apache-spark-user-list.1001560.n3.nabble.com/Spark-2-1-1-Graphx-graph-loader-GC-overhead-error-tp28841p28851.html Sent from the Apache Spark User List mailing list archive at Nabble.com. - To unsubs

Re: Spark 2.1.1 Graphx graph loader GC overhead error

2017-07-10 Thread Aritra Mandal
el framework. I will try constructing the graph with storagelevel:MEMORY_AND_DISK and post the outcome here The GC overhead error is happening even before the algorithm starts its pregel iterations it failing in the GraphLoader.fromEdgeList stage. Aritra -- View this message in context: http://apache-spark-user-lis

Re: Is GraphX really deprecated?

2017-05-16 Thread Sergey Zhemzhitsky
GraphFrames seems promising but it still has a lot of algorithms, which involve in one way or another GraphX, or run on top of GraphX according to github repo ( https://github.com/graphframes/graphframes/tree/master/src/main/scala/org/graphframes/lib), and in case of RDDs and semistructured data

Re: Is GraphX really deprecated?

2017-05-13 Thread Jacek Laskowski
Hi, I'd like to hear the official statement too. My take on GraphX and Spark Streaming is that they are long dead projects with GraphFrames and Structured Streaming taking their place, respectively. Jacek On 13 May 2017 3:00 p.m., "Sergey Zhemzhitsky" <szh.s...@gmail.com> wrote

Is GraphX really deprecated?

2017-05-13 Thread Sergey Zhemzhitsky
Hello Spark users, I just would like to know whether the GraphX component should be considered deprecated and no longer actively maintained and should not be considered when starting new graph-processing projects on top of Spark in favour of other graph-processing frameworks? I'm asking

Re: GraphX subgraph from list of VertexIds

2017-05-12 Thread Robineast
it would be listVertices.contains(vid) wouldn't it? - Robin East Spark GraphX in Action Michael Malak and Robin East Manning Publications Co. http://www.manning.com/books/spark-graphx-in-action -- View this message in context: http://apache-spark-user-list.1001560.n3.nabble.com/GraphX

Research paper used in GraphX

2017-03-31 Thread Md. Rezaul Karim
Hi All, Could anyone please tell me which research paper(s) was/were used to implement the metrics like strongly connected components, page rank, triangle count, closeness centrality, clustering coefficient etc. in Spark GrpahX? Regards, _ *Md. Rezaul Karim*,

Re: GraphX Pregel API: add vertices and edges

2017-03-23 Thread Robineast
>From the section on Pregel API in the GraphX programming guide: '... the Pregel operator in GraphX is a bulk-synchronous parallel messaging abstraction /constrained to the topology of the graph/.'. Does that answer your question? Did you read the programming guide? - Robin East Sp

Re: GraphX Pregel API: add vertices and edges

2017-03-23 Thread Robineast
GraphX is not synonymous with Pregel. To quote the GraphX programming guide <http://spark.apache.org/docs/latest/graphx-programming-guide.html#pregel-api> 'GraphX exposes a variant of the Pregel API.'. There is no compute() function in GraphX - see the Pregel API section of the progr

Re: GraphX Pregel API: add vertices and edges

2017-03-23 Thread Robineast
Not that I'm aware of. Where did you read that? - Robin East Spark GraphX in Action Michael Malak and Robin East Manning Publications Co. http://www.manning.com/books/spark-graphx-in-action -- View this message in context: http://apache-spark-user-list.1001560.n3.nabble.com/GraphX

Re: Graphx Examples for ALS

2017-02-17 Thread Irving Duran
Not sure I follow your question. Do you want to use ALS or GraphX? Thank You, Irving Duran On Fri, Feb 17, 2017 at 7:07 AM, balaji9058 <kssb...@gmail.com> wrote: > Hi, > > Where can i find the the ALS recommendation algorithm for large data set? > > Please feel to share

Graphx Examples for ALS

2017-02-17 Thread balaji9058
Hi, Where can i find the the ALS recommendation algorithm for large data set? Please feel to share your ideas/algorithms/logic to build recommendation engine by using spark graphx Thanks in advance. Thanks, Balaji -- View this message in context: http://apache-spark-user-list.1001560.n3

Bipartite projection with Graphx

2017-02-03 Thread balaji9058
Hi, Is possible Bipartite projection with Graphx Rdd1 #id name 1 x1 2 x2 3 x3 4 x4 5 x5 6 x6 7 x7 8 x8 Rdd2 #id name 10001 y1 10002 y2 10003 y3 10004 y4 10005 y5 10006 y6 EdgeList #src id Dest id 1 10001 1 10002 2

Re: Examples in graphx

2017-01-30 Thread Ankur Srivastava
ConnectedComponent on your Graph in GrpahX of GraphFrames. But GraphX or GraphFrame expect the data in to Dataframes (RDD) vertices and edges and it really relies on the relational nature of these entities to run any algorithm. AFAIK same is the case with Giraph too so if you want to use GraphFrames

Re: Examples in graphx

2017-01-29 Thread Felix Cheung
Which graph do you are thinking about? Here's one for neo4j https://neo4j.com/blog/neo4j-3-0-apache-spark-connector/ From: Deepak Sharma <deepakmc...@gmail.com> Sent: Sunday, January 29, 2017 4:28:19 AM To: spark users Subject: Examples in grap

nvitation to speak about GraphX at London Opensource Graph Technologies Meetup

2017-01-29 Thread haikal
hoping to continue growing the community with the series of talks that we'll be holding. The first meetup we're planning to host is during the week of the 6th of March, in Central London. We would like to include GraphX as one of the technologies being introduced to the London developer community

Examples in graphx

2017-01-29 Thread Deepak Sharma
Hi There, Are there any examples of using GraphX along with any graph DB? I am looking to persist the graph in graph based DB and then read it back in spark , process using graphx. -- Thanks Deepak www.bigdatabig.com www.keosha.net

Re: Shortest path performance in Graphx with Spark

2017-01-11 Thread Irving Duran
iles in a dropbox folder [here][1] > > I load and map these `json` records to create the `vertices` and `edge` > types required by `graphx` like this: > > val vertices_raw = sqlContext.read.json("path/vertices.json.gz") > val vertices = vertices_raw.rdd.map(ro

Shortest path performance in Graphx with Spark

2017-01-10 Thread Gerard Casey
Hello everyone, I am creating a graph from a `gz` compressed `json` file of `edge` and `vertices` type. I have put the files in a dropbox folder [here][1] I load and map these `json` records to create the `vertices` and `edge` types required by `graphx` like this: val vertices_raw

[Spark GraphX] Graph Aggregation

2017-01-04 Thread Will Swank
Hi All - I'm new to Spark and GraphX and I'm trying to perform a simple sum operation for a graph. I have posted this question to StackOverflow and also on the gitter channel to no avail. I'm wondering if someone can help me out. The StackOverflow link is here: http://stackoverflow.com

Re: Spark Graphx with Database

2016-12-30 Thread Felix Cheung
2016 9:27 PM Subject: Spark Graphx with Database To: <user@spark.apache.org<mailto:user@spark.apache.org>> Hi All, I would like to know about spark graphx execution/processing with database.Yes, i understand spark graphx is in-memory processing but some extent we can manage querying but wo

Spark Graphx with Database

2016-12-26 Thread balaji9058
Hi All, I would like to know about spark graphx execution/processing with database.Yes, i understand spark graphx is in-memory processing but some extent we can manage querying but would like to do much more complex query or processing.Please suggest me the usecase or steps for the same

Re: How to load edge with properties file useing GraphX

2016-12-15 Thread Felix Cheung
useing GraphX Hi, I want to load a edge file and vertex attriInfos file as follow ,how can i use these two files create Graph ? edge file -> "SrcId,DestId,propertis... " vertex attriInfos file-> "VID, properties..." I learned about there have a GraphLoader

How to load edge with properties file useing GraphX

2016-12-15 Thread zjp_j...@163.com
Hi, I want to load a edge file and vertex attriInfos file as follow ,how can i use these two files create Graph ? edge file -> "SrcId,DestId,propertis... " vertex attriInfos file-> "VID, properties..." I learned about there have a GraphLoader object that can load edge file

Re: Graphx triplet comparison

2016-12-14 Thread Robineast
. In essence you are doing a cartesian join followed by a filter - that doesn't scale. You might want to consider joining one triplet RDD to another and then evaluating the condition. - Robin East Spark GraphX in Action Michael Malak and Robin East Manning Publications Co. http

Re: Graphx triplet comparison

2016-12-13 Thread balaji9058
101,104,5,BS 101,105,5,BS 1,101,4,R -- View this message in context: http://apache-spark-user-list.1001560.n3.nabble.com/Graphx-triplet-comparison-tp28198p28205.html Sent from the Apache Spark User List mailing list archive at Nabble.com. - To unsubscribe e-mail: user-unsubscr...@spark.apache.org

Re: Graphx triplet comparison

2016-12-13 Thread Robineast
No sure what you are asking. What's wrong with: triplet1.filter(condition3) triplet2.filter(condition3) - Robin East Spark GraphX in Action Michael Malak and Robin East Manning Publications Co. http://www.manning.com/books/spark-graphx-in-action -- View this message in context: http

Graphx triplet comparison

2016-12-12 Thread balaji9058
Hi, I would like to know how to do graphx triplet comparison in scala. Example there are two triplets; val triplet1 = mainGraph.triplet.filter(condition1) val triplet2 = mainGraph.triplet.filter(condition2) now i want to do compare triplet1 & triplet2 with condition3 -- View this mes

Graphx triplet loops causing null pointer exception

2016-12-12 Thread balaji9058
mpl.scala:50) at org.apache.spark.graphx.impl.GraphImpl.triplets(GraphImpl.scala:49) Please help and let me know if anything required in my explanation -- View this message in context: http://apache-spark-user-list.1001560.n3.nabble.com/Graphx-triplet-loops-causing-null-pointer-exception-tp281

Re: [GraphX] Extreme scheduler delay

2016-12-06 Thread Sean Owen
(For what it is worth, I happened to look into this with Anton earlier and am also pretty convinced it's related to GraphX rather than the app. It's somewhat difficult to debug what gets sent in the closure AFAICT.) On Tue, Dec 6, 2016 at 7:49 PM AntonIpp <an...@simudyne.com> wrote:

[GraphX] Extreme scheduler delay

2016-12-06 Thread AntonIpp
Hi everyone, I have a small Scala test project which uses GraphX and for some reason has extreme scheduler delay when executed on the cluster. The problem is not related to the cluster configuration, as other GraphX applications run without any issue. I have attached the source code

Re: GraphX Pregel not update vertex state properly, cause messages loss

2016-11-28 Thread rohit13k
lpa.vertices.collect().map(println) } } -- View this message in context: http://apache-spark-user-list.1001560.n3.nabble.com/GraphX-Pregel-not-update-vertex-state-properly-cause-messages-loss-tp28100p28139.html Sent from the Apache Spark User List mailing list archive at Nabble.com.

Re: GraphX Pregel not update vertex state properly, cause messages loss

2016-11-24 Thread 吴 郎
-- From: "Dale Wang"<w.zhaok...@gmail.com>; Date: 2016年11月24日(星期四) 中午11:10 To: "吴 郎"<fuz@qq.com>; Cc: "user"<user@spark.apache.org>; Subject: Re: GraphX Pregel not update vertex state properly, cause messages loss The prob

Re: GraphX Pregel not update vertex state properly, cause messages loss

2016-11-23 Thread Dale Wang
vertex view. The GraphX Pregel API heavily relies on mapReduceTriplets(old)/aggregateMessages(new) API who heavily relies on the correct behavior of the triplet view of a graph. Thus this bug influences on behavior of Pregel API. Though I cannot figure out why the bug appears either, but I s

Re: GraphX Pregel not update vertex state properly, cause messages loss

2016-11-23 Thread rohit13k
Created a JIRA for the same https://issues.apache.org/jira/browse/SPARK-18568 -- View this message in context: http://apache-spark-user-list.1001560.n3.nabble.com/GraphX-Pregel-not-update-vertex-state-properly-cause-messages-loss-tp28100p28124.html Sent from the Apache Spark User List mailing

Re: GraphX Pregel not update vertex state properly, cause messages loss

2016-11-23 Thread rohit13k
solution for it except for recreating the graph after every superstep to reinforce edge triplets to have the latest value of the vertex. but this is not a good solution performance wise. -- View this message in context: http://apache-spark-user-list.1001560.n3.nabble.com/GraphX-Pregel-not-update

GraphX Pregel not update vertex state properly, cause messages loss

2016-11-17 Thread fuz_woo
hi,everyone, I encountered a strange problem these days when i'm attempting to use the GraphX Pregel interface to implement a simple single-source-shortest-path algorithm. below is my code: import com.alibaba.fastjson.JSONObject import org.apache.spark.graphx._ import org.apache.spark.{SparkConf

GraphX updating vertex property

2016-11-15 Thread Saliya Ekanayake
Hi, I have created a property graph using GraphX. Each vertex has an integer array as a property. I'd like to update the values of theses arrays without creating new graph objects. Is this possible in Spark? Thank you, Saliya -- Saliya Ekanayake, Ph.D Applied Computer Scientist Network

GraphX and Public Transport Shortest Paths

2016-11-08 Thread Gerard Casey
Hi all, I’m doing a quick lit review. Consider I have a graph that has link weights dependent on time. I.e., a bus on this road gives a journey time (link weight) of x at time y. This is a classic public transport shortest path problem. This is a weighted directed graph that is time

Re: GraphX Connected Components

2016-11-08 Thread Robineast
Have you tried this? https://spark.apache.org/docs/2.0.1/api/scala/index.html#org.apache.spark.graphx.GraphLoader$ - Robin East Spark GraphX in Action Michael Malak and Robin East Manning Publications Co. http://www.manning.com/books/spark-graphx-in-action -- View this message

Need to know about GraphX and Streaming

2016-11-02 Thread Md. Mahedi Kaysar
Hi All, I am new in Spark GraphX. I am trying to understand it for analysing graph streaming data. I know Spark has streaming modules that works on both Tabular and DStream mechanism. I am wondering if it is possible to leverage streaming APIs in GraphX for analysing the real-time graph streams

Re: java.lang.NoSuchMethodError - GraphX

2016-10-25 Thread Brian Wilson
shortest path algorithm from your `Spark > GraphX in Action` book. The part in question is Listing 6.4 "Executing the > shortest path algorithm that uses breadcrumbs" from Chapter 6 [here][1]. > > I have my own graph that I create from two RDDs. There are `344436`

Re: java.lang.NoSuchMethodError - GraphX

2016-10-25 Thread Brian Wilson
Thank you Michael! This looks perfect but I have a `NoSuchMethodError` that I cannot understand. I am trying to implement a weighted shortest path algorithm from your `Spark GraphX in Action` book. The part in question is Listing 6.4 "Executing the shortest path algorithm that

Re: GraphX drawing algorithm

2016-09-11 Thread Michael Malak
In chapter 10 of Spark GraphX In Action, we describe how to use Zeppelin with d3.js to render graphs using d3's force-directed rendering algorithm. The source code can be downloaded for free from  https://www.manning.com/books/spark-graphx-in-action From: agc studio <agron.dev

GraphX drawing algorithm

2016-09-11 Thread agc studio
Hi all, I was wondering if a force-directed graph drawing algorithm has been implemented for graphX? Thanks

Problem with Graphx and number of partitions

2016-08-31 Thread alvarobrandon
Helo everyone: I have a problem when setting the number of partitions inside Graphx with the ConnectedComponents function. When I launch the application with the default number of partition everything runs smoothly. However when I increase the number of partitions to 150 for example ( it happens

Future of GraphX

2016-08-24 Thread mas
Hi, I am wondering if there is any current work going on optimizations of GraphX? I am aware of GraphFrames that is built on Data frame. However, is there any plane to build GraphX's version on newer Spark APIs, i.e., Datasets or Spark 2.0? Furthermore, Is there any plan to incorporate Graph

GraphX VerticesRDD issue - java.lang.ArrayStoreException: java.lang.Long

2016-08-18 Thread Gerard Casey
Dear all, I am building a graph from two JSON files. Spark version 1.6.1 Creating Edge and Vertex RDDs from JSON files. The vertex JSON files looks like this: {"toid": "osgb400031043205", "index": 1, "point": [508180.748, 195333.973]} {"toid": "osgb400031043206",

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