Re: Spark, Scala, and DNA sequencing

Thanks Ofir and Sean, I'm aware of AMPLab's ADAM. Spark is bringing down the cost of genome analysis to consumer level. The potential for the future of medicine is exciting indeed. I normally do Scala consulting which keeps me too busy, but recently I finally got some spare time to look

Re: Spark, Scala, and DNA sequencing

Also also, you may be interested in GATK, built on Spark, for genomics: https://github.com/broadinstitute/gatk On Sun, Jul 24, 2016 at 7:56 AM, Ofir Manor wrote: > Hi James, > BTW - if you are into analyzing DNA with Spark, you may also be interested > in ADAM: >

Re: Spark, Scala, and DNA sequencing

Hi James, BTW - if you are into analyzing DNA with Spark, you may also be interested in ADAM: https://github.com/bigdatagenomics/adam http://bdgenomics.org/ Ofir Manor Co-Founder & CTO | Equalum Mobile: +972-54-7801286 | Email: ofir.ma...@equalum.io On Fri, Jul 22, 2016 at 10:31 PM,

Spark, Scala, and DNA sequencing

Hi! I hope this may be of use/interest to someone: Spark, a Worked Example: Speeding Up DNA Sequencing http://scala-bility.blogspot.nl/2016/07/spark-worked-example-speeding-up-dna.html James - To unsubscribe e-mail: