| > Probably apples and oranges, but Jim Kent wrote a job scheduler for his
| > kilocluster that nicely handled about 1M jobs in six hours.  It's the
| > standard thing for whole genome sequence alignments at ucsc.
| 
| I think that's neat, I would like to learn more. Was this scheduler for 
| an arbitrary job mix, or specialized to that app?
 
Well, it was designed to do what we needed and no more, but it's still
pretty general.  The input is a file of commands, and it runs them all
until they are all done (with a way to retry the ones that failed.)

http://www.cse.ucsc.edu/~kent/
http://www.soe.ucsc.edu/~donnak/eng/parasol.htm

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