Hey Malcolm, Seems to be only manifesting itself with the EnsJ adapter...I'm forwarding this message to Steve Searle, who wrote the EnsJ adapter. Although I do find it a bit weird that it would only manifest itself with the EnsJ adapter...
-Ed On Thu, 2008-06-05 at 15:55 -0500, Cook, Malcolm wrote: > Ed, > > Hi. > > Dobule clicking does serve to select all the exons. THis works. > > Dragging picks up the whole transcript... it looks like it is going to work. > > Dropping though leaves only the 5'-most exon in the anotation tier. > > Not the whole transcript. > > Boo hoo. > > Any ideas? > > Malcolm Cook > > -----Original Message----- > From: Ed Lee [mailto:[EMAIL PROTECTED] > Sent: Thursday, June 05, 2008 3:43 PM > To: Cook, Malcolm > Cc: '[email protected]' > Subject: Re: [apollo] annotation of new mult-exon transcript impossible > > Hi Malcolm, > > If you double click on an exon in the results panel, it should select all > exons, which then you can drag into the annotation panel. > Alternatively you can select multiple exons by holding down shift and > clicking each exon you want to bring into the annotation panel (useful if you > don't want all exons to become annotations). > > -Ed > > On Thu, 2008-06-05 at 12:30 -0500, Cook, Malcolm wrote: > > Apolloers (?), > > > > I am unable to add a joined feature into my annotation tier as a new > > transcript. > > > > I read in > > http://apollo.berkeleybop.org/current/userguide.html#MouseFunctions > > > > Left drag If you drag a feature into the annotation tier, it > > will be added as a new transcript (if editing is enabled) Shift-Left > > drag If you shift-drag a feature onto an annotation, it will be added > > as a new exon (if editing is enabled) > > > > It appears that left-drag works like shift-left drag - both just copy > > the individual exon. > > > > I do see a "ghost image" of the entire selected transcript when I drag > > and drop, but only the 5'-most exon gets an annotation feature > > > > I am using > > Apollo Genome Annotation and Curation Tool, version 1.9.2, > > last updated May 23 2008 > > windows xp > > > > looking at EnsJ loaded mouse data from local ensemble mysql database. > > > > > > I tried dragging the exons individually and then merging them, but the > > merge option was dim. > > > > I reported this as a bug, but, perhaps the bug is in the operator.... > > > > Any help appreciated! > > > > Malcolm Cook > > Stowers Institute for Medical Research - Kansas City, Missouri > > > > > > _______________________________________________ > > apollo mailing list > > [email protected] > > http://mail.fruitfly.org/mailman/listinfo/apollo > > _______________________________________________ apollo mailing list [email protected] http://mail.fruitfly.org/mailman/listinfo/apollo
