Hi there! Today, I'm have some doubts concerning Apollo's performance. Here my problem: still using Apollo1.10.0 connected to a Chado DB
I've been testing the time Apollo needs to open a genomic region, and here the result:
when trying on a region with no much stuff (some repeats and abInitio results, always on the results side), Apollo is taking more less 30 seconds to open a 5kb region. But! when trying on a region where all the resources are present (results of proteins alignements, ESTs, and mostly 454 reads!) opening 10kb is taking me 5 minutes.
I know that the more results you have in the database, the longer the time Apollo takers to open your genomic region, is the performance I'm getting "normal"? What about your experiences? We'll be starting a manual curation projet soon, and I'm pretty worried about the time that'll take for our colleaugues to open Apollo!!!!
Any suggesstions? Thanks a lot!!!! Betina _______________________________________________ apollo mailing list [email protected] http://mail.fruitfly.org/mailman/listinfo/apollo
