Date: Saturday, October 31, 2020 @ 14:20:48 Author: archange Revision: 737720
upgpkg: python-h5py 3.0.0-1 Modified: python-h5py/trunk/PKGBUILD ----------+ PKGBUILD | 35 +++++++++++++++++++---------------- 1 file changed, 19 insertions(+), 16 deletions(-) Modified: PKGBUILD =================================================================== --- PKGBUILD 2020-10-31 14:20:11 UTC (rev 737719) +++ PKGBUILD 2020-10-31 14:20:48 UTC (rev 737720) @@ -6,43 +6,46 @@ _pkg=h5py pkgname=python-${_pkg} -pkgver=2.10.0 -pkgrel=3 +pkgver=3.0.0 +pkgrel=1 pkgdesc="General-purpose Python bindings for the HDF5 library" arch=(x86_64) url="https://www.h5py.org/" license=(BSD) -depends=(hdf5 python-numpy python-six) +depends=(hdf5 liblzf python-numpy python-six) makedepends=(cython python-pkgconfig) -checkdepends=(python-pytest) +checkdepends=(python-pytest python-pytest-mpi python-pytables) conflicts=(hdf5-openmpi) source=(https://files.pythonhosted.org/packages/source/h/${_pkg}/${_pkg}-${pkgver}.tar.gz - python-h5py-hd5-1.12.patch - h5py-2.10.0-hdf5-v1.12-h5i.patch) -sha256sums=('84412798925dc870ffd7107f045d7659e60f5d46d1c70c700375248bf6bf512d' - '0533a13f65de73ea9b61220cdb367038b441a61ac7468ebcda549a15c47f879b' - 'b8686225d69b3bb103b5153a4783569eec98ca49be136623bcad18d140427e64') + h5py-system-lzf.patch::https://github.com/h5py/h5py/commit/da96e2b8b9f73fc67c128c9b65787b3527be119c.patch + h5py-py3.8-cached_property.patch::https://github.com/h5py/h5py/commit/a87984f0bc2b2596948880d2ec38196017e275fc.patch) +sha256sums=('7d3803be1b530c68c2955faba726dc0f591079b68941a0c0269b5384a42ab519' + '665c15ffc714788749f4e0d731775cb927593fed496097e4abf2174612d9a747' + '4d5cdf7af4ea5d79ec0ac39f178ef55fe6f571efb76a008e553c4b3030730372') validpgpkeys=(AC47F71DB275ECD0B3DA46E857FA4540DD4EFCF7 # Thomas A Caswell (Brookhaven National Lab) <tcasw...@bnl.gov> 96B7334D7610EE3E68AFFE589E027116943D6A8B) # Thomas A Caswell <tcasw...@bnl.gov> (new key) # See https://github.com/h5py/h5py/issues/1299 about lack of GPG sigs for recent releases prepare() { + cd ${_pkg}-${pkgver} # Remove RPATH - sed -i "s/settings\\['runtime_library_dirs'\\] = settings\\['library_dirs'\\]/pass/" ${_pkg}-${pkgver}/setup_build.py - cd ${_pkg}-${pkgver} - patch -p1 -i ../h5py-2.10.0-hdf5-v1.12-h5i.patch - patch -p1 -i ../python-h5py-hd5-1.12.patch + sed -i "s/settings\\['runtime_library_dirs'\\] = settings\\['library_dirs'\\]/pass/" setup_build.py + # Build against system lzf + patch -Np1 -i ../h5py-system-lzf.patch + # cached_property is included in python 3.8 + patch -Np1 -i ../h5py-py3.8-cached_property.patch } build() { cd ${_pkg}-${pkgver} - python setup.py build + H5PY_SYSTEM_LZF=1 python setup.py build } check() { cd ${_pkg}-${pkgver} - # Ongoing issues with hdf5 1.12 https://github.com/h5py/h5py/pull/1536 - python setup.py test || warning "Tests failed" +# local python_version=$(python -c 'import sys; print(".".join(map(str, sys.version_info[:2])))') +# PYTHONPATH="$PWD/build/lib.linux-$CARCH-${python_version}" python -m pytest --pyargs h5py -rxXs + python setup.py test } package() {