Date: Tuesday, March 2, 2021 @ 21:42:17 Author: arojas Revision: 878512
archrelease: copy trunk to community-x86_64 Added: gap/repos/community-x86_64/PKGBUILD (from rev 878511, gap/trunk/PKGBUILD) gap/repos/community-x86_64/gap-libsemigroups-1.3.4.patch (from rev 878511, gap/trunk/gap-libsemigroups-1.3.4.patch) gap/repos/community-x86_64/gap.sh (from rev 878511, gap/trunk/gap.sh) Deleted: gap/repos/community-x86_64/PKGBUILD gap/repos/community-x86_64/gap-cddlib-0.94k.patch gap/repos/community-x86_64/gap-libsemigroups-1.3.4.patch gap/repos/community-x86_64/gap-libsemigroups-1.3.patch gap/repos/community-x86_64/gap-normaliz-3.8.8.patch gap/repos/community-x86_64/gap-polymake-4.0.patch gap/repos/community-x86_64/gap.sh -------------------------------+ PKGBUILD | 295 ++++++++++++-------------- gap-cddlib-0.94k.patch | 15 - gap-libsemigroups-1.3.4.patch | 294 +++++++++++++------------- gap-libsemigroups-1.3.patch | 12 - gap-normaliz-3.8.8.patch | 13 - gap-polymake-4.0.patch | 450 ---------------------------------------- gap.sh | 14 - 7 files changed, 297 insertions(+), 796 deletions(-) Deleted: PKGBUILD =================================================================== --- PKGBUILD 2021-03-02 21:41:55 UTC (rev 878511) +++ PKGBUILD 2021-03-02 21:42:17 UTC (rev 878512) @@ -1,158 +0,0 @@ -# Maintainer: Antonio Rojas <aro...@archlinux.org> -# Contributor: TDY <t...@archlinux.info> -# Contributor: Rémy Oudompheng <oudom...@clipper.ens.fr> - -pkgbase=gap -pkgname=(gap gap-doc gap-packages) -pkgver=4.11.0 -pkgrel=9 -pkgdesc="Groups, Algorithms, Programming: a system for computational discrete algebra" -arch=(x86_64) -url="https://www.gap-system.org/" -license=(GPL) -source=("https://files.gap-system.org/gap-${pkgver%.*}/tar.gz/gap-$pkgver.tar.gz" gap.sh - git+https://github.com/gap-packages/NormalizInterface#commit=cd69a42 - gap-polymake-4.0.patch - gap-cddlib-0.94k.patch - gap-normaliz-3.8.8.patch - gap-libsemigroups-1.3.patch - gap-libsemigroups-1.3.4.patch) -sha256sums=('6fda7af23394708aeb3b4bca8885f5fdcb7c3ae4419639dfb2d9f67d3f590abb' - '143fb8a79a52c007903cce13407850df309ef803a9b00398d05169355917de46' - 'SKIP' - 'e3f6d671c8df9acb6143a7c279391957967cd44f0a00b949323401d5b54ed685' - '151ddbd7cf234158c8bd79153ac0ded3076f103859a65b238dd5c86084be3d98' - '4023aaf1617d653f84d711d5642485984395a01464d64ded0a7e884c48b2a332' - 'c69c35293c194528a0beeeea533d3bae93208cc6a6bed9ffab2c2ebdb1c6d444' - 'e4024342332fd583967b2797627dfae61eb6ebcb5b73baced1e2a464be4d679b') -makedepends=(libxaw givaro mpfi normaliz polymake boost libsemigroups c-xsc zeromq fplll wget chrpath fmt git) - -prepare() { - cd gap-$pkgver - -# Use system normaliz - sed -e '/build-normaliz.sh/d' -i bin/BuildPackages.sh -# Use system libsemigroups - sed -e 's|test "$with_external_libsemigroups" = yes|true|' -i pkg/semigroups-*/configure -# Fix https://bugs.archlinux.org/task/55174 - sed -e '/xgap/d' -i pkg/sonata-*/PackageInfo.g - sed -e '/XGAP/d' -i pkg/cryst/PackageInfo.g - -# Update NormalizInterface to support recent normaliz - rm -r pkg/NormalizInterface-1.1.0 - cp -r ../NormalizInterface pkg - - cd pkg/semigroups-* - patch -p1 -i "$srcdir"/gap-libsemigroups-1.3.patch # Fix build with libsemigroups 1.3 - patch -p1 -i "$srcdir"/gap-libsemigroups-1.3.4.patch # Fix build with libsemigroups 1.3.4 - - cd ../PolymakeInterface-* - patch -p2 -i "$srcdir"/gap-polymake-4.0.patch # Fix build with polymake 4.0 - - cd ../CddInterface-* - patch -p1 -i "$srcdir"/gap-cddlib-0.94k.patch # Fix build with cddlib 0.94k - - cd ../NormalizInterface - patch -p1 -i "$srcdir"/gap-normaliz-3.8.8.patch # Fix build with normaliz 3.8.8 -} - -build() { - cd gap-$pkgver - ./configure --prefix=/usr --with-gmp=system - - # https://bugzilla.gnome.org/show_bug.cgi?id=655517 - sed -i -e 's/ -shared / -Wl,-O1,--as-needed\0/g' libtool - - make - make libgap.la - - # Install libgap so we can link packages against it - mkdir -p tmp-install - libtool --mode=install install libgap.la "$srcdir"/gap-$pkgver/tmp-install - - cd pkg - export CFLAGS+=" -fcommon" # Fix anupq and cohomolo build with GCC 10 - export CXXFLAGS+=" -I/usr/include/cxsc" # Find c-xsc headers - export LDFLAGS+=" -L$srcdir/gap-$pkgver/tmp-install -lgap" # See https://trac.sagemath.org/ticket/27372 - export LD_LIBRARY_PATH="$srcdir"/gap-$pkgver/tmp-install - export MAKEFLAGS="-j1" - ../bin/BuildPackages.sh -} - -_standardpkgs=(GAPDoc-* primgrp-* SmallGrp-* transgrp atlasrep autpgrp-* alnuth-* crisp-* ctbllib FactInt-* fga irredsol-* laguna-* - polenta-* polycyclic-* resclasses-* sophus-* tomlib-*) - -package_gap() { - depends=(gmp zlib) - optdepends=('gap-packages: extra packages' 'gap-doc: documentation') - conflicts=(libgap) - replaces=(gap-data libgap gap-4.8 gap-4.8-data) - cd gap-$pkgver - - install -Dm644 src/*.h -t "$pkgdir"/usr/include/gap - install -Dm644 gen/config.h -t "$pkgdir"/usr/include/gap - install -Dm644 src/hpc/*.h -t "$pkgdir"/usr/include/gap/hpc - - install -d "$pkgdir"/usr/lib - libtool --mode=install install libgap.la "$pkgdir"/usr/lib - - mkdir -p "$pkgdir"/usr/{bin,lib/gap/pkg} - cp -r grp lib "$pkgdir"/usr/lib/gap - for _pkg in ${_standardpkgs[@]}; do - cp -r pkg/$_pkg "$pkgdir"/usr/lib/gap/pkg - done - install -Dm755 gap -t "$pkgdir"/usr/lib/gap -# Install launcher script - install -Dm755 "$srcdir"/gap.sh "$pkgdir"/usr/bin/gap - - mkdir -p "$pkgdir"/usr/share - ln -s /usr/lib/gap -t "$pkgdir"/usr/share # expected by sagemath -} - -package_gap-doc() { - depends=(gap) - replaces=(gap-4.8-doc) - pkgdesc="Documentation for GAP" - cd gap-$pkgver - - mkdir -p "$pkgdir"/usr/lib/gap - cp -r doc "$pkgdir"/usr/lib/gap -} - -package_gap-packages() { - depends=(gap) - replaces=(gap-4.8-packages) - optdepends=('normaliz: Normaliz interface package' 'libxaw: xgap package' 'c-xsc: float package' 'mpfi: float package' - 'libmpc: float package' 'fplll: float package' 'zeromq: ZeroMQ interface package' 'planarity: digraph package' - 'curl: curl interface package' 'libsemigroups: semigroups package' 'polymake: Polymake interface package') - pkgdesc="Extra packages for GAP" - cd gap-$pkgver - - mkdir -p "$pkgdir"/usr/{bin,lib/gap} - cp -r pkg "$pkgdir"/usr/lib/gap - -# fix xgap launch script - sed -e "s|/build/gap/src/gap-$pkgver|/usr/lib/gap|g" -e 's|^GAP=.*|GAP=/usr/lib/gap/gap|g' \ - "$pkgdir"/usr/lib/gap/pkg/xgap-*/xgap.sh > "$pkgdir"/usr/bin/xgap - chmod 755 "$pkgdir"/usr/bin/xgap - rm "$pkgdir"/usr/lib/gap/pkg/xgap-*/xgap.sh* - -# provided by main gap package - for _pkg in ${_standardpkgs[@]}; do - rm -r "$pkgdir"/usr/lib/gap/pkg/$_pkg - done - -# fix RPATH - find "$pkgdir"/usr/lib/gap/pkg/ -name '*.so' | xargs chrpath -d - -# remove bundled planarity - rm -r "$pkgdir"/usr/lib/gap/pkg/digraphs-*/bin/lib/ - -# remove leftover binaries and source files - find "$pkgdir"/usr/lib/gap/pkg -name .libs -o -name '*.o' | xargs rm -fr - find "$pkgdir"/usr/lib/gap/pkg -type d -name src | xargs rm -fr - rm -r "$pkgdir"/usr/lib/gap/pkg/digraphs*/extern - rm -r "$pkgdir"/usr/lib/gap/pkg/semigroups*/libsemigroups - rm -r "$pkgdir"/usr/lib/gap/pkg/NormalizInterface/{.git*,.release,.c*,.t*,autom4te.cache} - rm -r "$pkgdir"/usr/lib/gap/pkg/log -} Copied: gap/repos/community-x86_64/PKGBUILD (from rev 878511, gap/trunk/PKGBUILD) =================================================================== --- PKGBUILD (rev 0) +++ PKGBUILD 2021-03-02 21:42:17 UTC (rev 878512) @@ -0,0 +1,137 @@ +# Maintainer: Antonio Rojas <aro...@archlinux.org> +# Contributor: TDY <t...@archlinux.info> +# Contributor: Rémy Oudompheng <oudom...@clipper.ens.fr> + +pkgbase=gap +pkgname=(gap gap-doc gap-packages) +pkgver=4.11.1 +pkgrel=1 +pkgdesc="Groups, Algorithms, Programming: a system for computational discrete algebra" +arch=(x86_64) +url="https://www.gap-system.org/" +license=(GPL) +source=(https://github.com/gap-system/gap/releases/download/v$pkgver/$pkgbase-$pkgver.tar.gz + gap.sh + gap-libsemigroups-1.3.4.patch) +sha256sums=('6635c5da7d82755f8339486b9cac33766f58712f297e8234fba40818902ea304' + '143fb8a79a52c007903cce13407850df309ef803a9b00398d05169355917de46' + 'b24cda7763bbdf249f4693c22231c17a682aacdc4bc5754e88e0ace9700af7e7') +makedepends=(libxaw givaro mpfi cddlib boost libsemigroups c-xsc zeromq fplll wget chrpath fmt) +# TODO: unbundle normaliz + +prepare() { + cd gap-$pkgver + +# Use system libsemigroups + sed -e 's|test "$with_external_libsemigroups" = yes|true|' -i pkg/semigroups-*/configure +# Fix https://bugs.archlinux.org/task/55174 + sed -e '/xgap/d' -i pkg/sonata-*/PackageInfo.g + sed -e '/XGAP/d' -i pkg/cryst/PackageInfo.g + + cd pkg/semigroups-* + patch -p1 -i "$srcdir"/gap-libsemigroups-1.3.4.patch # Fix build with libsemigroups 1.3.4 + + cd ../CddInterface-* + sed -e 's|/usr/include/cdd|/usr/include/cddlib|' -i configure.ac # Fix build with cddlib 0.94k + rm configure +} + +build() { + cd gap-$pkgver + ./configure --prefix=/usr --with-gmp=system + + # https://bugzilla.gnome.org/show_bug.cgi?id=655517 + sed -i -e 's/ -shared / -Wl,-O1,--as-needed\0/g' libtool + + make + make libgap.la + + # Install libgap so we can link packages against it + mkdir -p tmp-install + libtool --mode=install install libgap.la "$srcdir"/gap-$pkgver/tmp-install + rm "$srcdir"/gap-$pkgver/tmp-install/libgap.la + + cd pkg + export CFLAGS+=" -fcommon" # Fix anupq and cohomolo build with GCC 10 + export CXXFLAGS+=" -I/usr/include/cxsc" # Find c-xsc headers + export LDFLAGS+=" -L$srcdir/gap-$pkgver/tmp-install -lgap" # See https://trac.sagemath.org/ticket/27372 + export LD_LIBRARY_PATH="$srcdir"/gap-$pkgver/tmp-install + ../bin/BuildPackages.sh +} + +_standardpkgs=(GAPDoc-* primgrp-* SmallGrp-* transgrp atlasrep autpgrp-* alnuth-* crisp-* ctbllib-* FactInt-* fga irredsol-* laguna-* + polenta-* polycyclic-* resclasses-* sophus-* tomlib-*) + +package_gap() { + depends=(gmp zlib) + optdepends=('gap-packages: extra packages' 'gap-doc: documentation') + conflicts=(libgap) + replaces=(gap-data libgap gap-4.8 gap-4.8-data) + cd gap-$pkgver + + install -Dm644 src/*.h -t "$pkgdir"/usr/include/gap + install -Dm644 gen/config.h -t "$pkgdir"/usr/include/gap + install -Dm644 src/hpc/*.h -t "$pkgdir"/usr/include/gap/hpc + + install -d "$pkgdir"/usr/lib + libtool --mode=install install libgap.la "$pkgdir"/usr/lib + + mkdir -p "$pkgdir"/usr/{bin,lib/gap/pkg} + cp -r grp lib "$pkgdir"/usr/lib/gap + for _pkg in ${_standardpkgs[@]}; do + cp -r pkg/$_pkg "$pkgdir"/usr/lib/gap/pkg + done + install -Dm755 gap -t "$pkgdir"/usr/lib/gap +# Install launcher script + install -Dm755 "$srcdir"/gap.sh "$pkgdir"/usr/bin/gap + + mkdir -p "$pkgdir"/usr/share + ln -s /usr/lib/gap -t "$pkgdir"/usr/share # expected by sagemath +} + +package_gap-doc() { + depends=(gap) + replaces=(gap-4.8-doc) + pkgdesc="Documentation for GAP" + cd gap-$pkgver + + mkdir -p "$pkgdir"/usr/lib/gap + cp -r doc "$pkgdir"/usr/lib/gap +} + +package_gap-packages() { + depends=(gap) + replaces=(gap-4.8-packages) + optdepends=('libxaw: xgap package' 'c-xsc: float package' 'mpfi: float package' + 'libmpc: float package' 'fplll: float package' 'zeromq: ZeroMQ interface package' 'planarity: digraph package' + 'curl: curl interface package' 'libsemigroups: semigroups package' 'cddlib: CddLib interface package') + pkgdesc="Extra packages for GAP" + cd gap-$pkgver + + mkdir -p "$pkgdir"/usr/{bin,lib/gap} + cp -r pkg "$pkgdir"/usr/lib/gap + +# fix xgap launch script + sed -e "s|/build/gap/src/gap-$pkgver|/usr/lib/gap|g" -e 's|^GAP=.*|GAP=/usr/lib/gap/gap|g' \ + "$pkgdir"/usr/lib/gap/pkg/xgap-*/xgap.sh > "$pkgdir"/usr/bin/xgap + chmod 755 "$pkgdir"/usr/bin/xgap + rm "$pkgdir"/usr/lib/gap/pkg/xgap-*/xgap.sh* + +# provided by main gap package + for _pkg in ${_standardpkgs[@]}; do + rm -r "$pkgdir"/usr/lib/gap/pkg/$_pkg + done + +# fix RPATH + find "$pkgdir"/usr/lib/gap/pkg/ -name '*.so' | xargs chrpath -d + +# remove bundled planarity + rm -r "$pkgdir"/usr/lib/gap/pkg/digraphs-*/bin/lib/ + +# remove leftover binaries and source files + find "$pkgdir"/usr/lib/gap/pkg -name .libs -o -name '*.o' | xargs rm -fr + find "$pkgdir"/usr/lib/gap/pkg -type d -name src | xargs rm -fr + rm -r "$pkgdir"/usr/lib/gap/pkg/digraphs*/extern + rm -r "$pkgdir"/usr/lib/gap/pkg/semigroups*/libsemigroups + rm -r "$pkgdir"/usr/lib/gap/pkg/log +} Deleted: gap-cddlib-0.94k.patch =================================================================== --- gap-cddlib-0.94k.patch 2021-03-02 21:41:55 UTC (rev 878511) +++ gap-cddlib-0.94k.patch 2021-03-02 21:42:17 UTC (rev 878512) @@ -1,15 +0,0 @@ -diff --git a/src/CddInterface.c b/src/CddInterface.c -index da948e0..e025492 100644 ---- a/src/CddInterface.c -+++ b/src/CddInterface.c -@@ -4,8 +4,8 @@ - - #include "src/compiled.h" /* GAP headers */ - --#include "setoper.h" --#include "cdd.h" -+#include "cddlib/setoper.h" -+#include "cddlib/cdd.h" - - #include "gmp.h" - Deleted: gap-libsemigroups-1.3.4.patch =================================================================== --- gap-libsemigroups-1.3.4.patch 2021-03-02 21:41:55 UTC (rev 878511) +++ gap-libsemigroups-1.3.4.patch 2021-03-02 21:42:17 UTC (rev 878512) @@ -1,141 +0,0 @@ -diff --git a/src/pkg.cc b/src/pkg.cc -index 31987a1c..cd94e0d9 100644 ---- a/src/pkg.cc -+++ b/src/pkg.cc -@@ -35,10 +35,10 @@ - #include "libsemigroups/blocks.hpp" - #include "libsemigroups/cong.hpp" - #include "libsemigroups/froidure-pin.hpp" --#include "libsemigroups/uf.hpp" -+#include "libsemigroups/uf-old.hpp" - - using libsemigroups::Congruence; --using libsemigroups::detail::UF; -+using libsemigroups::detail::UFOld; - - #if !defined(SIZEOF_VOID_P) - #error Something is wrong with this GAP installation: SIZEOF_VOID_P not defined -@@ -102,7 +102,7 @@ void TSemiObjFreeFunc(Obj o) { - SEMIGROUPS_ASSERT(TNUM_OBJ(o) == T_SEMI); - switch (SUBTYPE_OF_T_SEMI(o)) { - case T_SEMI_SUBTYPE_UF: { -- delete CLASS_OBJ<UF*>(o); -+ delete CLASS_OBJ<UFOld*>(o); - break; - } - case T_SEMI_SUBTYPE_CONG: { -@@ -157,7 +157,7 @@ void TSemiObjSaveFunc(Obj o) { - - switch (SUBTYPE_OF_T_SEMI(o)) { - case T_SEMI_SUBTYPE_UF: { -- UF* uf = CLASS_OBJ<UF*>(o); -+ UFOld* uf = CLASS_OBJ<UFOld*>(o); - SaveUInt(uf->get_size()); - for (size_t i = 0; i < uf->get_size(); i++) { - SaveUInt(uf->find(i)); -@@ -196,7 +196,7 @@ void TSemiObjLoadFunc(Obj o) { - for (size_t i = 0; i < size; i++) { - table->push_back(LoadUInt()); - } -- ADDR_OBJ(o)[1] = reinterpret_cast<Obj>(new UF(*table)); -+ ADDR_OBJ(o)[1] = reinterpret_cast<Obj>(new UFOld(*table)); - break; - } - case T_SEMI_SUBTYPE_CONG: { -diff --git a/src/uf.cc b/src/uf.cc -index b7fd7c96..7fa34162 100644 ---- a/src/uf.cc -+++ b/src/uf.cc -@@ -26,28 +26,28 @@ - #include "semigroups-debug.h" - #include "src/compiled.h" - --#include "libsemigroups/uf.hpp" -+#include "libsemigroups/uf-old.hpp" - --using libsemigroups::detail::UF; -+using libsemigroups::detail::UFOld; - - // GAP level functions - - Obj UF_NEW(Obj self, Obj size) { - SEMIGROUPS_ASSERT(IS_INTOBJ(size) && INT_INTOBJ(size) > 0); -- return OBJ_CLASS(new UF(INT_INTOBJ(size)), T_SEMI_SUBTYPE_UF); -+ return OBJ_CLASS(new UFOld(INT_INTOBJ(size)), T_SEMI_SUBTYPE_UF); - } - - Obj UF_COPY(Obj self, Obj uf) { -- return OBJ_CLASS(new UF(*CLASS_OBJ<UF*>(uf)), T_SEMI_SUBTYPE_UF); -+ return OBJ_CLASS(new UFOld(*CLASS_OBJ<UFOld*>(uf)), T_SEMI_SUBTYPE_UF); - } - - Obj UF_SIZE(Obj self, Obj uf) { -- return INTOBJ_INT(CLASS_OBJ<UF*>(uf)->get_size()); -+ return INTOBJ_INT(CLASS_OBJ<UFOld*>(uf)->get_size()); - } - - Obj UF_FIND(Obj self, Obj uf, Obj i) { - SEMIGROUPS_ASSERT(IS_INTOBJ(i) && INT_INTOBJ(i) > 0); -- return INTOBJ_INT(CLASS_OBJ<UF*>(uf)->find(INT_INTOBJ(i) - 1) + 1); -+ return INTOBJ_INT(CLASS_OBJ<UFOld*>(uf)->find(INT_INTOBJ(i) - 1) + 1); - } - - Obj UF_UNION(Obj self, Obj uf, Obj pair) { -@@ -56,18 +56,18 @@ Obj UF_UNION(Obj self, Obj uf, Obj pair) { - && INT_INTOBJ(ELM_PLIST(pair, 1)) > 0); - SEMIGROUPS_ASSERT(IS_INTOBJ(ELM_PLIST(pair, 2)) - && INT_INTOBJ(ELM_PLIST(pair, 2)) > 0); -- CLASS_OBJ<UF*>(uf)->unite(INT_INTOBJ(ELM_PLIST(pair, 1)) - 1, -+ CLASS_OBJ<UFOld*>(uf)->unite(INT_INTOBJ(ELM_PLIST(pair, 1)) - 1, - INT_INTOBJ(ELM_PLIST(pair, 2)) - 1); - return 0L; - } - - Obj UF_FLATTEN(Obj self, Obj uf) { -- CLASS_OBJ<UF*>(uf)->flatten(); -+ CLASS_OBJ<UFOld*>(uf)->flatten(); - return 0L; - } - - Obj UF_TABLE(Obj self, Obj uf) { -- UF::table_type* table = CLASS_OBJ<UF*>(uf)->get_table(); -+ UFOld::table_type* table = CLASS_OBJ<UFOld*>(uf)->get_table(); - size_t size = table->size(); - Obj gap_table = NEW_PLIST_IMM(T_PLIST_CYC, size); - // IMMUTABLE since it should not be altered on the GAP level -@@ -79,7 +79,7 @@ Obj UF_TABLE(Obj self, Obj uf) { - } - - Obj UF_BLOCKS(Obj self, Obj uf) { -- UF::blocks_type const* blocks = CLASS_OBJ<UF*>(uf)->get_blocks(); -+ UFOld::blocks_type const* blocks = CLASS_OBJ<UFOld*>(uf)->get_blocks(); - size_t size = blocks->size(); - size_t i, j; - -@@ -105,13 +105,13 @@ Obj UF_BLOCKS(Obj self, Obj uf) { - gap_int_t UF_NR_BLOCKS(Obj self, Obj uf) { - SEMIGROUPS_ASSERT(TNUM_OBJ(uf) == T_SEMI - && SUBTYPE_OF_T_SEMI(uf) == T_SEMI_SUBTYPE_UF); -- return INTOBJ_INT(CLASS_OBJ<UF*>(uf)->nr_blocks()); -+ return INTOBJ_INT(CLASS_OBJ<UFOld*>(uf)->nr_blocks()); - } - - gap_list_t UF_BLOCK_REPS(Obj self, Obj uf) { - SEMIGROUPS_ASSERT(TNUM_OBJ(uf) == T_SEMI - && SUBTYPE_OF_T_SEMI(uf) == T_SEMI_SUBTYPE_UF); -- UF* uf_cpp = CLASS_OBJ<UF*>(uf); -+ UFOld* uf_cpp = CLASS_OBJ<UFOld*>(uf); - uf_cpp->reset_next_rep(); - size_t next_rep = uf_cpp->next_rep(); - -@@ -132,8 +132,8 @@ Obj UF_JOIN(Obj self, Obj uf1, Obj uf2) { - SEMIGROUPS_ASSERT(TNUM_OBJ(uf2) == T_SEMI - && SUBTYPE_OF_T_SEMI(uf2) == T_SEMI_SUBTYPE_UF); - SEMIGROUPS_ASSERT(CLASS_OBJ<UF*>(uf1)->get_size() -- == CLASS_OBJ<UF*>(uf2)->get_size()); -+ == CLASS_OBJ<UFOld*>(uf2)->get_size()); - Obj uf_join = UF_COPY(self, uf1); -- CLASS_OBJ<UF*>(uf_join)->join(CLASS_OBJ<UF*>(uf2)); -+ CLASS_OBJ<UFOld*>(uf_join)->join(CLASS_OBJ<UFOld*>(uf2)); - return uf_join; - } Copied: gap/repos/community-x86_64/gap-libsemigroups-1.3.4.patch (from rev 878511, gap/trunk/gap-libsemigroups-1.3.4.patch) =================================================================== --- gap-libsemigroups-1.3.4.patch (rev 0) +++ gap-libsemigroups-1.3.4.patch 2021-03-02 21:42:17 UTC (rev 878512) @@ -0,0 +1,153 @@ +diff --git a/src/semigrp.h b/src/semigrp.h +index f2d5463a..327a7f14 100644 +--- a/src/semigrp.h ++++ b/src/semigrp.h +@@ -23,6 +23,7 @@ + + #include "compiled.h" // GAP headers + ++#include "libsemigroups/element-adapters.hpp" + #include "libsemigroups/froidure-pin.hpp" + + #include "converter.h" +diff --git a/src/pkg.cc b/src/pkg.cc +index 31987a1c..cd94e0d9 100644 +--- a/src/pkg.cc ++++ b/src/pkg.cc +@@ -35,10 +35,10 @@ + #include "libsemigroups/blocks.hpp" + #include "libsemigroups/cong.hpp" + #include "libsemigroups/froidure-pin.hpp" +-#include "libsemigroups/uf.hpp" ++#include "libsemigroups/uf-old.hpp" + + using libsemigroups::Congruence; +-using libsemigroups::detail::UF; ++using libsemigroups::detail::UFOld; + + #if !defined(SIZEOF_VOID_P) + #error Something is wrong with this GAP installation: SIZEOF_VOID_P not defined +@@ -102,7 +102,7 @@ void TSemiObjFreeFunc(Obj o) { + SEMIGROUPS_ASSERT(TNUM_OBJ(o) == T_SEMI); + switch (SUBTYPE_OF_T_SEMI(o)) { + case T_SEMI_SUBTYPE_UF: { +- delete CLASS_OBJ<UF*>(o); ++ delete CLASS_OBJ<UFOld*>(o); + break; + } + case T_SEMI_SUBTYPE_CONG: { +@@ -157,7 +157,7 @@ void TSemiObjSaveFunc(Obj o) { + + switch (SUBTYPE_OF_T_SEMI(o)) { + case T_SEMI_SUBTYPE_UF: { +- UF* uf = CLASS_OBJ<UF*>(o); ++ UFOld* uf = CLASS_OBJ<UFOld*>(o); + SaveUInt(uf->get_size()); + for (size_t i = 0; i < uf->get_size(); i++) { + SaveUInt(uf->find(i)); +@@ -196,7 +196,7 @@ void TSemiObjLoadFunc(Obj o) { + for (size_t i = 0; i < size; i++) { + table->push_back(LoadUInt()); + } +- ADDR_OBJ(o)[1] = reinterpret_cast<Obj>(new UF(*table)); ++ ADDR_OBJ(o)[1] = reinterpret_cast<Obj>(new UFOld(*table)); + break; + } + case T_SEMI_SUBTYPE_CONG: { +diff --git a/src/uf.cc b/src/uf.cc +index b7fd7c96..7fa34162 100644 +--- a/src/uf.cc ++++ b/src/uf.cc +@@ -26,28 +26,28 @@ + #include "semigroups-debug.h" + #include "src/compiled.h" + +-#include "libsemigroups/uf.hpp" ++#include "libsemigroups/uf-old.hpp" + +-using libsemigroups::detail::UF; ++using libsemigroups::detail::UFOld; + + // GAP level functions + + Obj UF_NEW(Obj self, Obj size) { + SEMIGROUPS_ASSERT(IS_INTOBJ(size) && INT_INTOBJ(size) > 0); +- return OBJ_CLASS(new UF(INT_INTOBJ(size)), T_SEMI_SUBTYPE_UF); ++ return OBJ_CLASS(new UFOld(INT_INTOBJ(size)), T_SEMI_SUBTYPE_UF); + } + + Obj UF_COPY(Obj self, Obj uf) { +- return OBJ_CLASS(new UF(*CLASS_OBJ<UF*>(uf)), T_SEMI_SUBTYPE_UF); ++ return OBJ_CLASS(new UFOld(*CLASS_OBJ<UFOld*>(uf)), T_SEMI_SUBTYPE_UF); + } + + Obj UF_SIZE(Obj self, Obj uf) { +- return INTOBJ_INT(CLASS_OBJ<UF*>(uf)->get_size()); ++ return INTOBJ_INT(CLASS_OBJ<UFOld*>(uf)->get_size()); + } + + Obj UF_FIND(Obj self, Obj uf, Obj i) { + SEMIGROUPS_ASSERT(IS_INTOBJ(i) && INT_INTOBJ(i) > 0); +- return INTOBJ_INT(CLASS_OBJ<UF*>(uf)->find(INT_INTOBJ(i) - 1) + 1); ++ return INTOBJ_INT(CLASS_OBJ<UFOld*>(uf)->find(INT_INTOBJ(i) - 1) + 1); + } + + Obj UF_UNION(Obj self, Obj uf, Obj pair) { +@@ -56,18 +56,18 @@ Obj UF_UNION(Obj self, Obj uf, Obj pair) { + && INT_INTOBJ(ELM_PLIST(pair, 1)) > 0); + SEMIGROUPS_ASSERT(IS_INTOBJ(ELM_PLIST(pair, 2)) + && INT_INTOBJ(ELM_PLIST(pair, 2)) > 0); +- CLASS_OBJ<UF*>(uf)->unite(INT_INTOBJ(ELM_PLIST(pair, 1)) - 1, ++ CLASS_OBJ<UFOld*>(uf)->unite(INT_INTOBJ(ELM_PLIST(pair, 1)) - 1, + INT_INTOBJ(ELM_PLIST(pair, 2)) - 1); + return 0L; + } + + Obj UF_FLATTEN(Obj self, Obj uf) { +- CLASS_OBJ<UF*>(uf)->flatten(); ++ CLASS_OBJ<UFOld*>(uf)->flatten(); + return 0L; + } + + Obj UF_TABLE(Obj self, Obj uf) { +- UF::table_type* table = CLASS_OBJ<UF*>(uf)->get_table(); ++ UFOld::table_type* table = CLASS_OBJ<UFOld*>(uf)->get_table(); + size_t size = table->size(); + Obj gap_table = NEW_PLIST_IMM(T_PLIST_CYC, size); + // IMMUTABLE since it should not be altered on the GAP level +@@ -79,7 +79,7 @@ Obj UF_TABLE(Obj self, Obj uf) { + } + + Obj UF_BLOCKS(Obj self, Obj uf) { +- UF::blocks_type const* blocks = CLASS_OBJ<UF*>(uf)->get_blocks(); ++ UFOld::blocks_type const* blocks = CLASS_OBJ<UFOld*>(uf)->get_blocks(); + size_t size = blocks->size(); + size_t i, j; + +@@ -105,13 +105,13 @@ Obj UF_BLOCKS(Obj self, Obj uf) { + gap_int_t UF_NR_BLOCKS(Obj self, Obj uf) { + SEMIGROUPS_ASSERT(TNUM_OBJ(uf) == T_SEMI + && SUBTYPE_OF_T_SEMI(uf) == T_SEMI_SUBTYPE_UF); +- return INTOBJ_INT(CLASS_OBJ<UF*>(uf)->nr_blocks()); ++ return INTOBJ_INT(CLASS_OBJ<UFOld*>(uf)->nr_blocks()); + } + + gap_list_t UF_BLOCK_REPS(Obj self, Obj uf) { + SEMIGROUPS_ASSERT(TNUM_OBJ(uf) == T_SEMI + && SUBTYPE_OF_T_SEMI(uf) == T_SEMI_SUBTYPE_UF); +- UF* uf_cpp = CLASS_OBJ<UF*>(uf); ++ UFOld* uf_cpp = CLASS_OBJ<UFOld*>(uf); + uf_cpp->reset_next_rep(); + size_t next_rep = uf_cpp->next_rep(); + +@@ -132,8 +132,8 @@ Obj UF_JOIN(Obj self, Obj uf1, Obj uf2) { + SEMIGROUPS_ASSERT(TNUM_OBJ(uf2) == T_SEMI + && SUBTYPE_OF_T_SEMI(uf2) == T_SEMI_SUBTYPE_UF); + SEMIGROUPS_ASSERT(CLASS_OBJ<UF*>(uf1)->get_size() +- == CLASS_OBJ<UF*>(uf2)->get_size()); ++ == CLASS_OBJ<UFOld*>(uf2)->get_size()); + Obj uf_join = UF_COPY(self, uf1); +- CLASS_OBJ<UF*>(uf_join)->join(CLASS_OBJ<UF*>(uf2)); ++ CLASS_OBJ<UFOld*>(uf_join)->join(CLASS_OBJ<UFOld*>(uf2)); + return uf_join; + } Deleted: gap-libsemigroups-1.3.patch =================================================================== --- gap-libsemigroups-1.3.patch 2021-03-02 21:41:55 UTC (rev 878511) +++ gap-libsemigroups-1.3.patch 2021-03-02 21:42:17 UTC (rev 878512) @@ -1,12 +0,0 @@ -diff --git a/src/semigrp.h b/src/semigrp.h -index f2d5463a..327a7f14 100644 ---- a/src/semigrp.h -+++ b/src/semigrp.h -@@ -23,6 +23,7 @@ - - #include "compiled.h" // GAP headers - -+#include "libsemigroups/element-adapters.hpp" - #include "libsemigroups/froidure-pin.hpp" - - #include "converter.h" Deleted: gap-normaliz-3.8.8.patch =================================================================== --- gap-normaliz-3.8.8.patch 2021-03-02 21:41:55 UTC (rev 878511) +++ gap-normaliz-3.8.8.patch 2021-03-02 21:42:17 UTC (rev 878512) @@ -1,13 +0,0 @@ -diff --git a/src/normaliz.cc b/src/normaliz.cc -index 979152d..f4a5748 100644 ---- a/src/normaliz.cc -+++ b/src/normaliz.cc -@@ -26,7 +26,7 @@ - #include "compiled.h" // GAP headers - - #include "libnormaliz/cone.h" --#include "libnormaliz/map_operations.h" -+#include "libnormaliz/list_and_map_operations.h" - - #include <vector> - Deleted: gap-polymake-4.0.patch =================================================================== --- gap-polymake-4.0.patch 2021-03-02 21:41:55 UTC (rev 878511) +++ gap-polymake-4.0.patch 2021-03-02 21:42:17 UTC (rev 878512) @@ -1,450 +0,0 @@ -diff --git a/PolymakeInterface/src/polymake_cone.cpp b/PolymakeInterface/src/polymake_cone.cpp -index 6c17f49d..637266a0 100644 ---- a/PolymakeInterface/src/polymake_cone.cpp -+++ b/PolymakeInterface/src/polymake_cone.cpp -@@ -110,16 +110,16 @@ Obj REAL_GENERATING_RAYS_OF_CONE( Polymake_Data* data, Obj cone){ - matr2 = -matr2; - Obj RETLI3 = GAP_MATRIX_POLYMAKE_INTEGER_MATRIX( &matr2 ); - -- int len1 = LEN_PLIST( RETLI1 ); -- int len2 = LEN_PLIST( RETLI2 ); -+ Int len1 = LEN_PLIST( RETLI1 ); -+ Int len2 = LEN_PLIST( RETLI2 ); - - Obj RETLI = NEW_PLIST( T_PLIST, len1 + 2*len2 ); - SET_LEN_PLIST( RETLI, len1 + 2*len2 ); - -- for( int i = 1; i <= len1; i++ ) -+ for( Int i = 1; i <= len1; i++ ) - SET_ELM_PLIST( RETLI, i, ELM_PLIST( RETLI1, i ) ); - -- for( int i = 1; i <= len2; i++ ){ -+ for( Int i = 1; i <= len2; i++ ){ - SET_ELM_PLIST( RETLI, len1 + i, ELM_PLIST( RETLI2, i ) ); - SET_ELM_PLIST( RETLI, len1 + len2 + i, ELM_PLIST( RETLI3, i ) ); - } -@@ -168,7 +168,7 @@ Obj REAL_HILBERT_BASIS_OF_CONE( Polymake_Data* data, Obj cone){ - polymake::Array<polymake::Matrix<polymake::Integer>> arr; - try - { -- arr = coneobj->give("HILBERT_BASIS_GENERATORS"); -+ coneobj->give("HILBERT_BASIS_GENERATORS") >> arr; - } - - POLYMAKE_GAP_CATCH -@@ -232,16 +232,16 @@ Obj REAL_DEFINING_INEQUALITIES_OF_CONE( Polymake_Data* data, Obj cone){ - matr2 = -matr2; - Obj RETLI3 = GAP_MATRIX_POLYMAKE_INTEGER_MATRIX( &matr2 ); - -- int len1 = LEN_PLIST( RETLI1 ); -- int len2 = LEN_PLIST( RETLI2 ); -+ Int len1 = LEN_PLIST( RETLI1 ); -+ Int len2 = LEN_PLIST( RETLI2 ); - - Obj RETLI = NEW_PLIST( T_PLIST, len1 + 2*len2 ); - SET_LEN_PLIST( RETLI, len1 + 2*len2 ); - -- for( int i = 1; i <= len1; i++ ) -+ for( Int i = 1; i <= len1; i++ ) - SET_ELM_PLIST( RETLI, i, ELM_PLIST( RETLI1, i ) ); - -- for( int i = 1; i <= len2; i++ ){ -+ for( Int i = 1; i <= len2; i++ ){ - SET_ELM_PLIST( RETLI, len1 + i, ELM_PLIST( RETLI2, i ) ); - SET_ELM_PLIST( RETLI, len1 + len2 + i, ELM_PLIST( RETLI3, i ) ); - } -diff --git a/PolymakeInterface/src/polymake_data.cpp b/PolymakeInterface/src/polymake_data.cpp -index 3fc25241..ea3a4ed7 100644 ---- a/PolymakeInterface/src/polymake_data.cpp -+++ b/PolymakeInterface/src/polymake_data.cpp -@@ -50,7 +50,7 @@ Obj ExternalPolymakeObjectTypeFunc(Obj o) { - void polymake_start( Polymake_Data* data ){ - if( ! data->initialized ){ - data->main_polymake_session = new polymake::Main; -- data->main_polymake_scope = new polymake::perl::Scope(data->main_polymake_session->newScope()); -+ data->main_polymake_scope = new pm::perl::Scope(data->main_polymake_session->newScope()); - data->initialized = true; - } - return; -diff --git a/PolymakeInterface/src/polymake_data.h b/PolymakeInterface/src/polymake_data.h -index b7d678ed..fcc3543c 100644 ---- a/PolymakeInterface/src/polymake_data.h -+++ b/PolymakeInterface/src/polymake_data.h -@@ -30,15 +30,15 @@ extern Obj TheTypeExternalPolymakeTropicalHypersurface; - extern Obj TheTypeExternalPolymakeTropicalPolytope; - extern Obj TheTypeExternalPolymakeMatroid; - --typedef pair<int, polymake::perl::Object*> object_pair; --typedef polymake::perl::Object perlobj; --typedef map<int, polymake::perl::Object*>::iterator iterator; -+typedef pair<int, pm::perl::BigObject*> object_pair; -+typedef pm::perl::BigObject perlobj; -+typedef map<int, pm::perl::BigObject*>::iterator iterator; - - struct Polymake_Data { - bool initialized; - polymake::Main *main_polymake_session; -- polymake::perl::Scope *main_polymake_scope; -- map<int, polymake::perl::Object*> *polymake_objects; -+ pm::perl::Scope *main_polymake_scope; -+ map<int, pm::perl::BigObject*> *polymake_objects; - int new_polymake_object_number; - }; - -diff --git a/PolymakeInterface/src/polymake_fan.cpp b/PolymakeInterface/src/polymake_fan.cpp -index 6ea650c8..43c2e982 100644 ---- a/PolymakeInterface/src/polymake_fan.cpp -+++ b/PolymakeInterface/src/polymake_fan.cpp -@@ -8,14 +8,14 @@ Obj REAL_FAN_BY_CONES( Polymake_Data* data, Obj cones ){ - return NULL; - } - -- int numberofcones = LEN_PLIST( cones ); -+ Int numberofcones = LEN_PLIST( cones ); - Obj akt; - Obj elem; - Obj numb; -- int numberofrays = 0; -+ Int numberofrays = 0; - data->main_polymake_session->set_application("fan"); - -- for(int i=1;i<=numberofcones;i++){ -+ for(Int i=1;i<=numberofcones;i++){ - akt = ELM_PLIST( cones, i ); - #ifdef MORE_TESTS - if( !IS_PLIST( akt ) ){ -@@ -27,15 +27,15 @@ Obj REAL_FAN_BY_CONES( Polymake_Data* data, Obj cones ){ - - } - -- int dimension = LEN_PLIST( ELM_PLIST( ELM_PLIST( cones, 1 ), 1 ) ); -- polymake::Array<polymake::Set<int>> incMatr(numberofcones); -+ Int dimension = LEN_PLIST( ELM_PLIST( ELM_PLIST( cones, 1 ), 1 ) ); -+ polymake::Array<polymake::Set<Int>> incMatr(numberofcones); - polymake::Matrix<polymake::Rational> matr(numberofrays+1,dimension); -- int raycounter = 1; -- for(int i = 1; i <= numberofcones; i++){ -+ Int raycounter = 1; -+ for(Int i = 1; i <= numberofcones; i++){ - akt = ELM_PLIST( cones, i ); -- for( int j = 1; j <= LEN_PLIST( akt ); j++){ -+ for( Int j = 1; j <= LEN_PLIST( akt ); j++){ - elem = ELM_PLIST( akt, j ); -- for( int k = 1; k <= LEN_PLIST( elem ); k++){ -+ for( Int k = 1; k <= LEN_PLIST( elem ); k++){ - numb = ELM_PLIST( elem, k ); - - #ifdef MORE_TESTS -@@ -75,9 +75,9 @@ Obj REAL_FAN_BY_RAYS_AND_CONES( Polymake_Data* data, Obj rays, Obj cones ){ - - POLYMAKE_RATIONAL_MATRIX_GAP_MATRIX( &matr, rays ); - -- int numberofcones = LEN_PLIST( cones ); -- polymake::Array<polymake::Set<int>> incMatr(numberofcones); -- for(int i=0;i<numberofcones;i++){ -+ Int numberofcones = LEN_PLIST( cones ); -+ polymake::Array<polymake::Set<Int>> incMatr(numberofcones); -+ for(Int i=0;i<numberofcones;i++){ - akt = ELM_PLIST( cones, i+1 ); - #ifdef MORE_TESTS - if( !IS_PLIST( akt ) ){ -@@ -85,7 +85,7 @@ Obj REAL_FAN_BY_RAYS_AND_CONES( Polymake_Data* data, Obj rays, Obj cones ){ - return NULL; - } - #endif -- for(int j = 0; j < LEN_PLIST( akt ) ; j++){ -+ for(Int j = 0; j < LEN_PLIST( akt ) ; j++){ - numb = ELM_PLIST( akt, j+1 ); - #ifdef MORE_TESTS - if( ! IS_INTOBJ( numb ) ){ -@@ -93,7 +93,7 @@ Obj REAL_FAN_BY_RAYS_AND_CONES( Polymake_Data* data, Obj rays, Obj cones ){ - return NULL; - } - #endif -- incMatr[i] += static_cast<int>(INT_INTOBJ( numb ) - 1); -+ incMatr[i] += static_cast<Int>(INT_INTOBJ( numb ) - 1); - } - } - -@@ -123,9 +123,9 @@ Obj REAL_FAN_BY_RAYS_AND_CONES_UNSAVE( Polymake_Data* data, Obj rays, Obj cones - polymake::Matrix<polymake::Rational> matr(0,0); - POLYMAKE_RATIONAL_MATRIX_GAP_MATRIX( &matr, rays ); - -- int numberofcones = LEN_PLIST( cones ); -+ Int numberofcones = LEN_PLIST( cones ); - polymake::IncidenceMatrix<> incMatr(numberofcones,matr.rows()); -- for(int i=0;i<numberofcones;i++){ -+ for(Int i=0;i<numberofcones;i++){ - akt = ELM_PLIST( cones, i+1 ); - #ifdef MORE_TESTS - if( !IS_PLIST( akt ) ){ -@@ -133,7 +133,7 @@ Obj REAL_FAN_BY_RAYS_AND_CONES_UNSAVE( Polymake_Data* data, Obj rays, Obj cones - return NULL; - } - #endif -- for(int j = 0; j < LEN_PLIST( akt ) ; j++){ -+ for(Int j = 0; j < LEN_PLIST( akt ) ; j++){ - numb = ELM_PLIST( akt, j+1 ); - #ifdef MORE_TESTS - if( ! IS_INTOBJ( numb ) ){ -@@ -275,8 +275,8 @@ Obj REAL_F_VECTOR( Polymake_Data* data, Obj fan){ - UInt matr_rows = matr.size(); - Obj RETLI = NEW_PLIST( T_PLIST , matr.size() ); - SET_LEN_PLIST( RETLI , matr_rows ); -- for(int i = 0;i<matr.size(); i++){ -- SET_ELM_PLIST(RETLI,i+1,INTOBJ_INT( static_cast<int>(matr[i]) )); -+ for(Int i = 0;i<matr.size(); i++){ -+ SET_ELM_PLIST(RETLI,i+1,INTOBJ_INT( static_cast<Int>(matr[i]) )); - CHANGED_BAG(RETLI); - } - return RETLI; -diff --git a/PolymakeInterface/src/polymake_fktn.cpp b/PolymakeInterface/src/polymake_fktn.cpp -index c8e6ad8b..6ed28e25 100644 ---- a/PolymakeInterface/src/polymake_fktn.cpp -+++ b/PolymakeInterface/src/polymake_fktn.cpp -@@ -120,12 +120,12 @@ Obj REAL_POLYMAKE_SKETCH_WITH_OPTIONS( Polymake_Data* data, Obj cone, Obj filena - #endif - perlobj* coneobj = PERLOBJ_POLYMAKEOBJ( cone ); - data->main_polymake_session->set_application_of(*coneobj); -- polymake::perl::OptionSet sketch_options; -+ pm::perl::OptionSet sketch_options; - if( IS_STRING( filename ) ){ - sketch_options["File"] << CSTR_STRING( filename ); - } - -- polymake::perl::OptionSet visual_options; -+ pm::perl::OptionSet visual_options; - if( IS_PLIST( options ) ){ - for( int i = 1; i <= LEN_PLIST( options ); i++ ){ - Obj current_option = ELM_PLIST( options, i ); -diff --git a/PolymakeInterface/src/polymake_fktn.h b/PolymakeInterface/src/polymake_fktn.h -index cabc6e12..e372c95e 100644 ---- a/PolymakeInterface/src/polymake_fktn.h -+++ b/PolymakeInterface/src/polymake_fktn.h -@@ -23,7 +23,7 @@ using std::pair; - // load the package. - - //static polymake::Main *main_polymake_session; --//static polymake::perl::Scope *main_polymake_scope; -+//static pm::perl::Scope *main_polymake_scope; - //static map<int, pm::perl::Object*> *polymake_objects; - //static int new_polymake_object_number; - -diff --git a/PolymakeInterface/src/polymake_main.cpp b/PolymakeInterface/src/polymake_main.cpp -index d4f45650..a114b932 100644 ---- a/PolymakeInterface/src/polymake_main.cpp -+++ b/PolymakeInterface/src/polymake_main.cpp -@@ -490,7 +490,7 @@ Obj FuncPOLYMAKE_RESET_WORKSPACE( Obj self ){ - - delete akt_data.main_polymake_session; - akt_data.main_polymake_session = new polymake::Main; -- akt_data.main_polymake_scope = new polymake::perl::Scope(akt_data.main_polymake_session->newScope()); -+ akt_data.main_polymake_scope = new pm::perl::Scope(akt_data.main_polymake_session->newScope()); - - return True; - -@@ -827,7 +827,7 @@ static Int InitLibrary ( StructInitInfo *module ) - // // We start with initialising the polymake classes. - // akt_data.initialized = false; - // // akt_data.main_polymake_session = new polymake::Main; --// // akt_data.main_polymake_scope = new polymake::perl::Scope(akt_data.main_polymake_session->newScope()); -+// // akt_data.main_polymake_scope = new pm::perl::Scope(akt_data.main_polymake_session->newScope()); - // // akt_data.main_polymake_session->set_application("polytope"); - // // akt_data.main_polymake_session->set_custom("$Verbose::scheduler",1); - // //This is pretty slow. -diff --git a/PolymakeInterface/src/polymake_matroid.cpp b/PolymakeInterface/src/polymake_matroid.cpp -index 5a92c09e..98d91896 100644 ---- a/PolymakeInterface/src/polymake_matroid.cpp -+++ b/PolymakeInterface/src/polymake_matroid.cpp -@@ -30,17 +30,17 @@ Obj REAL_CREATE_MATROID_ABSTRACT( Polymake_Data* data, Obj size, Obj elements ){ - return NULL; - } - -- int matroid_size = INT_INTOBJ( size ); -+ Int matroid_size = INT_INTOBJ( size ); - - if( ! IS_PLIST( elements ) ){ - ErrorMayQuit( "second argument is not a plain list", 0, 0); - return NULL; - } - -- int nr_of_basis = LEN_PLIST( elements ); -- polymake::Array<polymake::Set<int>> incMatr(nr_of_basis); -+ Int nr_of_basis = LEN_PLIST( elements ); -+ polymake::Array<polymake::Set<Int>> incMatr(nr_of_basis); - -- for( int current_basis=1;current_basis<=nr_of_basis;current_basis++){ -+ for( Int current_basis=1;current_basis<=nr_of_basis;current_basis++){ - - Obj current_basis_list = ELM_PLIST( elements, current_basis ); - -@@ -49,10 +49,10 @@ Obj REAL_CREATE_MATROID_ABSTRACT( Polymake_Data* data, Obj size, Obj elements ){ - return NULL; - } - -- int current_length = LEN_PLIST( current_basis_list ); -+ Int current_length = LEN_PLIST( current_basis_list ); - -- for( int i=1;i<=current_length;i++){ -- incMatr[current_basis] += static_cast<int>(INT_INTOBJ( ELM_PLIST( current_basis_list, i ) ) - 1); -+ for( Int i=1;i<=current_length;i++){ -+ incMatr[current_basis] += static_cast<Int>(INT_INTOBJ( ELM_PLIST( current_basis_list, i ) ) - 1); - } - - } -diff --git a/PolymakeInterface/src/polymake_polytopes.cpp b/PolymakeInterface/src/polymake_polytopes.cpp -index b82f9819..e7553ae5 100644 ---- a/PolymakeInterface/src/polymake_polytopes.cpp -+++ b/PolymakeInterface/src/polymake_polytopes.cpp -@@ -11,7 +11,7 @@ Obj REAL_CREATE_POLYTOPE_BY_POINTS( Polymake_Data* data, Obj polytope ){ - } - #endif - -- int len = LEN_PLIST( polytope ); -+ Int len = LEN_PLIST( polytope ); - Obj akt = ELM_PLIST( polytope, 1 ); - Obj elem; - -@@ -22,7 +22,7 @@ Obj REAL_CREATE_POLYTOPE_BY_POINTS( Polymake_Data* data, Obj polytope ){ - } - #endif - -- int len_elem = LEN_PLIST( akt ); -+ Int len_elem = LEN_PLIST( akt ); - data->main_polymake_session->set_application("polytope"); - - polymake::Matrix<polymake::Rational> matr(len,len_elem+1); -@@ -96,7 +96,7 @@ Obj REAL_VERTICES_OF_POLYTOPE( Polymake_Data* data, Obj polytope){ - LIZeil = NEW_PLIST( T_PLIST, matr.cols()-1); - SET_LEN_PLIST( LIZeil , matr_cols ); - for(int j = 1;j<matr.cols();j++){ -- SET_ELM_PLIST(LIZeil,j,INTOBJ_INT(static_cast<int>(matr(i,j)))); -+ SET_ELM_PLIST(LIZeil,j,INTOBJ_INT(static_cast<Int>(matr(i,j)))); - } - SET_ELM_PLIST(RETLI,k,LIZeil); - CHANGED_BAG(RETLI); -@@ -123,7 +123,7 @@ Obj REAL_LATTICE_POINTS_OF_POLYTOPE( Polymake_Data* data, Obj polytope){ - data->main_polymake_session->set_application_of(*polyobj); - polymake::Array<polymake::Matrix<polymake::Integer>> arr; - try{ -- arr = polyobj->give("LATTICE_POINTS_GENERATORS"); -+ polyobj->give("LATTICE_POINTS_GENERATORS") >> arr; - } - - POLYMAKE_GAP_CATCH -@@ -138,7 +138,7 @@ Obj REAL_LATTICE_POINTS_OF_POLYTOPE( Polymake_Data* data, Obj polytope){ - LIZeil = NEW_PLIST( T_PLIST, matr.cols()-1); - SET_LEN_PLIST( LIZeil , matr_cols ); - for(int j = 1;j<matr.cols();j++){ -- SET_ELM_PLIST(LIZeil,j,INTOBJ_INT(static_cast<int>(matr(i,j)))); -+ SET_ELM_PLIST(LIZeil,j,INTOBJ_INT(static_cast<Int>(matr(i,j)))); - } - SET_ELM_PLIST(RETLI,i+1,LIZeil); - CHANGED_BAG(RETLI); -@@ -242,7 +242,7 @@ Obj REAL_INTERIOR_LATTICE_POINTS( Polymake_Data* data, Obj polytope){ - LIZeil = NEW_PLIST( T_PLIST, matr.cols()-1); - SET_LEN_PLIST( LIZeil , matr_cols ); - for(int j = 1;j<matr.cols();j++){ -- SET_ELM_PLIST(LIZeil,j,INTOBJ_INT(static_cast<int>(matr(i,j)))); -+ SET_ELM_PLIST(LIZeil,j,INTOBJ_INT(static_cast<Int>(matr(i,j)))); - } - SET_ELM_PLIST(RETLI,i+1,LIZeil); - CHANGED_BAG(RETLI); -@@ -327,7 +327,7 @@ Obj REAL_TAIL_CONE_OF_POLYTOPE( Polymake_Data* data, Obj polytope){ - LIZeil = NEW_PLIST( T_PLIST, matr.cols()-1); - SET_LEN_PLIST( LIZeil , matr_cols ); - for(int j = 1;j<matr.cols();j++){ -- SET_ELM_PLIST(LIZeil,j, INTOBJ_INT( static_cast<int>(matr(i,j)) ) ); -+ SET_ELM_PLIST(LIZeil,j, INTOBJ_INT( static_cast<Int>(matr(i,j)) ) ); - } - SET_ELM_PLIST(RETLI,k,LIZeil); - CHANGED_BAG(RETLI); -@@ -413,7 +413,7 @@ Obj REAL_LATTICE_POINTS_GENERATORS( Polymake_Data* data, Obj polytope ){ - data->main_polymake_session->set_application_of(*polyobj); - polymake::Array<polymake::Matrix<polymake::Integer>> array; - try{ -- array = polyobj->give("LATTICE_POINTS_GENERATORS"); -+ polyobj->give("LATTICE_POINTS_GENERATORS") >> array; - } - - POLYMAKE_GAP_CATCH -diff --git a/PolymakeInterface/src/polymake_templates.h b/PolymakeInterface/src/polymake_templates.h -index 5acfb733..82445aa9 100644 ---- a/PolymakeInterface/src/polymake_templates.h -+++ b/PolymakeInterface/src/polymake_templates.h -@@ -18,7 +18,7 @@ using std::pair; - template<typename T> - void POLYMAKE_RATIONAL_MATRIX_GAP_MATRIX( T* polymake_matrix, Obj gap_matrix ){ - -- int rows = LEN_PLIST( gap_matrix ); -+ Int rows = LEN_PLIST( gap_matrix ); - Obj current = ELM_PLIST( gap_matrix, 1 ); - Obj elem; - -@@ -29,7 +29,7 @@ void POLYMAKE_RATIONAL_MATRIX_GAP_MATRIX( T* polymake_matrix, Obj gap_matrix ){ - } - #endif - -- int columns = LEN_PLIST( current ); -+ Int columns = LEN_PLIST( current ); - - polymake_matrix->resize( rows, columns ); - -@@ -72,7 +72,7 @@ Obj GAP_MATRIX_POLYMAKE_INTEGER_MATRIX( T* polymake_matrix ){ - LIZeil = NEW_PLIST( T_PLIST, polymake_matrix->cols() ); - SET_LEN_PLIST( LIZeil ,matr_cols); - for(int j = 0;j<polymake_matrix->cols();j++){ -- SET_ELM_PLIST(LIZeil,j+1,INTOBJ_INT(static_cast<int>((*polymake_matrix)(i,j)))); -+ SET_ELM_PLIST(LIZeil,j+1,INTOBJ_INT(static_cast<Int>((*polymake_matrix)(i,j)))); - } - SET_ELM_PLIST(RETLI,i+1,LIZeil); - } -diff --git a/PolymakeInterface/src/polymake_tropical.cpp b/PolymakeInterface/src/polymake_tropical.cpp -index cf3134d0..3d26fc61 100644 ---- a/PolymakeInterface/src/polymake_tropical.cpp -+++ b/PolymakeInterface/src/polymake_tropical.cpp -@@ -11,7 +11,7 @@ Obj REAL_TROPICAL_HYPERSURFACE_BY_MONOMS_AND_COEFFICIENTS( Polymake_Data* data, - } - #endif - -- int len = LEN_PLIST( monomials ); -+ Int len = LEN_PLIST( monomials ); - Obj akt = ELM_PLIST( monomials, 1 ); - Obj elem; - -@@ -30,13 +30,13 @@ Obj REAL_TROPICAL_HYPERSURFACE_BY_MONOMS_AND_COEFFICIENTS( Polymake_Data* data, - #endif - - -- int len_elem = LEN_PLIST( akt ); -+ Int len_elem = LEN_PLIST( akt ); - data->main_polymake_session->set_application("tropical"); - -- polymake::Matrix<int> matr(len, len_elem); -- polymake::Vector<int> coeff(len); -+ polymake::Matrix<Int> matr(len, len_elem); -+ polymake::Vector<Int> coeff(len); - -- for(int i=1;i<=len;i++){ -+ for(Int i=1;i<=len;i++){ - akt = ELM_PLIST( monomials, i ); - #ifdef MORE_TESTS - if( !IS_PLIST( akt ) ){ -@@ -49,7 +49,7 @@ Obj REAL_TROPICAL_HYPERSURFACE_BY_MONOMS_AND_COEFFICIENTS( Polymake_Data* data, - } - #endif - -- for(int j = 1; j <= len_elem; j++){ -+ for(Int j = 1; j <= len_elem; j++){ - elem = ELM_PLIST( akt, j); - - #ifdef MORE_TESTS -@@ -94,7 +94,7 @@ Obj REAL_MONOMIALS_OF_HYPERSURFACE( Polymake_Data* data, Obj hypersurf){ - - perlobj* polyobj = PERLOBJ_POLYMAKEOBJ( hypersurf ); - data->main_polymake_session->set_application_of(*polyobj); -- polymake::Matrix<int> matr; -+ polymake::Matrix<Int> matr; - try{ - polyobj->give("MONOMIALS") >> matr; - } Deleted: gap.sh =================================================================== --- gap.sh 2021-03-02 21:41:55 UTC (rev 878511) +++ gap.sh 2021-03-02 21:42:17 UTC (rev 878512) @@ -1,7 +0,0 @@ -#!/bin/sh - -GAP_ROOT="/usr/lib/gap" -GAP_DIR=$GAP_ROOT -GAP_EXE=$GAP_ROOT - -exec "$GAP_EXE/gap" -l "$GAP_DIR" "$@" Copied: gap/repos/community-x86_64/gap.sh (from rev 878511, gap/trunk/gap.sh) =================================================================== --- gap.sh (rev 0) +++ gap.sh 2021-03-02 21:42:17 UTC (rev 878512) @@ -0,0 +1,7 @@ +#!/bin/sh + +GAP_ROOT="/usr/lib/gap" +GAP_DIR=$GAP_ROOT +GAP_EXE=$GAP_ROOT + +exec "$GAP_EXE/gap" -l "$GAP_DIR" "$@"