Hi Everyone, I have 15 Affymetrix CEL files represent three pH conditions, acidic,basic, neutral.
I have to find the copy number for each gene in each condition. Now, how should I start? Firstly, I know to do the normalization by RMA model using affy package and I end up with probe ID and there expression values. Further, what should I do? By Sukhbir Singh Rattan. --~--~---------~--~----~------------~-------~--~----~ When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group. To post to this group, send email to aroma-affymetrix@googlegroups.com To unsubscribe from this group, send email to aroma-affymetrix-unsubscr...@googlegroups.com For more options, visit this group at http://groups.google.com/group/aroma-affymetrix?hl=en -~----------~----~----~----~------~----~------~--~---
