On Mon, Mar 1, 2010 at 10:11 PM, zaid <[email protected]> wrote: > Thanks will do. > > So basically aroma.affymetrix package won't install until we figure > out the affparser issue?
Look at http://cran.r-project.org/web/packages/aroma.affymetrix/ There you see that 'affxparser' is listed under "Depends:", which means it is a required package (==you have to have required packages installed before installing aroma.affymetrix). FYI, packages under "Imports:" are also required. Packages under "Suggests:" are not required. Note that according to the information on (sent you this before and available via the above URL): http://cran.r-project.org/web/checks/check_results_aroma.affymetrix.html the CRAN build/check servers, and especially 'r-devel-windows64-x86_64', can build/check the aroma.affymetrix package (there is only a NOTE which is ok) on Win64. This implies that they have a Win64 version of affxparser available. I don't know where they got it from; that's why I ask you to post to BioC. /Henrik > > Thanks > > On Mar 1, 12:44 pm, Henrik Bengtsson <[email protected]> > wrote: >> So affxparser is built by the Bioconductor framework. Please post to >> the BioC mailing list and ask there - they should be able to tell what >> the Win64 plans are. >> >> /Henrik >> >> >> >> On Mon, Mar 1, 2010 at 9:41 PM, zaid <[email protected]> wrote: >> > I'm using March 1st 64bit version on Windows but for some reason >> > affxparser seems to be unavailable. >> >> > On Mar 1, 9:48 am, Henrik Bengtsson <[email protected]> >> > wrote: >> >> On Mon, Mar 1, 2010 at 6:38 PM, zaid <[email protected]> wrote: >> >> > Is there support for aroma.affymetrix under R 64 bit? >> >> >> Definitely on Linux. Are you asking about Windows 64-bit? Then, I >> >> think so, cf: >> >> >> http://cran.r-project.org/web/checks/check_results_aroma.affymetrix.html >> >> >> but I don't have machines to test it myself - someone out there with a >> >> Win64 system that can test? You should also be aware of the 'Update 2 >> >> on MinGW-w64 builds for 64-bit Windows' (March 1, 2010) post on >> >> R-devel: >> >> >> http://tolstoy.newcastle.edu.au/R/e9/devel/10/03/0598.html >> >> >> /Henrik >> >> >> > -- >> >> > When reporting problems on aroma.affymetrix, make sure 1) to run the >> >> > latest version of the package, 2) to report the output of sessionInfo() >> >> > and traceback(), and 3) to post a complete code example. >> >> >> > You received this message because you are subscribed to the Google >> >> > Groups "aroma.affymetrix" group. >> >> > To post to this group, send email to [email protected] >> >> > To unsubscribe from this group, send email to >> >> > [email protected] >> >> > For more options, visit this group >> >> > athttp://groups.google.com/group/aroma-affymetrix?hl=en-Hide quoted >> >> > text - >> >> >> - Show quoted text - >> >> > -- >> > When reporting problems on aroma.affymetrix, make sure 1) to run the >> > latest version of the package, 2) to report the output of sessionInfo() >> > and traceback(), and 3) to post a complete code example. >> >> > You received this message because you are subscribed to the Google Groups >> > "aroma.affymetrix" group. >> > To post to this group, send email to [email protected] >> > To unsubscribe from this group, send email to >> > [email protected] >> > For more options, visit this group >> > athttp://groups.google.com/group/aroma-affymetrix?hl=en- Hide quoted text - >> >> - Show quoted text - > > -- > When reporting problems on aroma.affymetrix, make sure 1) to run the latest > version of the package, 2) to report the output of sessionInfo() and > traceback(), and 3) to post a complete code example. > > > You received this message because you are subscribed to the Google Groups > "aroma.affymetrix" group. > To post to this group, send email to [email protected] > To unsubscribe from this group, send email to > [email protected] > For more options, visit this group at > http://groups.google.com/group/aroma-affymetrix?hl=en -- When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group. To post to this group, send email to [email protected] To unsubscribe from this group, send email to [email protected] For more options, visit this group at http://groups.google.com/group/aroma-affymetrix?hl=en
